| Literature DB >> 33343895 |
Carmelo Moscatello1, Marta Di Nicola1, Serena Veschi2, Patrizia Di Gregorio3, Ettore Cianchetti1, Liborio Stuppia4, Pasquale Battista1, Alessandro Cama2, Maria Cristina Curia1, Gitana Maria Aceto1.
Abstract
The aetiology of breast and ovarian cancer (BC/OC) is multi-factorial. At present, the involvement of base excision repair (BER) glycosylases (MUTYH and OGG1) in BC/OC predisposition is controversial. The present study investigated whether germline mutation status and mRNA expression of two BER genes, MUTHY and OGG1, were correlated with BRCA1 in 59 patients with BC/OC and 50 matched population controls. In addition, to evaluate the relationship between MUTYH, OGG1 and BRCA1, their possible mutual modulation and correlation among mutational spectrum, gene expression and demographic characteristics were evaluated. The results identified 18 MUTYH and OGG1 variants, of which 4 were novel (2 MUTYH and 2 OGG1) in 44 of the 59 patients. In addition, two pathogenic mutations were identified: OGG1 p.Arg46Gln, detected in a patient with BC and a family history of cancer, and MUTYH p.Val234Gly in a patient with OC, also with a family history of cancer. A significant reduced transcript expression in MUTYH was observed (P=0.033) in cases, and in association with the presence of rare variants in the same gene (P=0.030). A significant correlation in the expression of the two BER genes was observed in cases (P=0.004), whereas OGG1 and BRCA1 was significantly correlated in cases (P=0.001) compared with controls (P=0.010). The results of the present study indicated that the relationship among mutational spectrum, gene expression and demographic characteristics may improve the genetic diagnosis and primary prevention of at-risk individuals belonging to families with reduced mRNA expression, regardless of mutation presence. Copyright: © Moscatello et al.Entities:
Keywords: BRCA1; MUTYH; OGG1; base excision repair; breast cancer; gene expression; mutation; ovarian cancer; oxidative stress; prevention
Year: 2020 PMID: 33343895 PMCID: PMC7725208 DOI: 10.3892/mco.2020.2177
Source DB: PubMed Journal: Mol Clin Oncol ISSN: 2049-9450
MUTYH and OGG1 germline variants identified in 59 patients with breast and ovarian cancer.
| A, | |||||||
|---|---|---|---|---|---|---|---|
| Frequency n (%) | |||||||
| Nucleotide change(s) | Effect | SNP | Clinical significance[ | Cases (n=59) | Controls (n=120) | Word population MAF[ | Mutpred value |
| c.36+11C>T | - | rs2275602 | VUS | 1 (1.7) | 0 (0) | 0.01 | - |
| c.53C>T | Pro18Leu | rs79777494 | VUS | 1 (1.7) | 0 (0) | <0.01 | - |
| c.64G>A | Val22Met | rs3219484 | N | 2 (3.4) | - | 0.02 | - |
| c.74G>A | Gly25Asp | rs75321043 | VUS | 1 (1.7) | 0 (0) | <0.01 | - |
| c.157+30A>G | - | rs3219485 | N | 2 (3.4) | - | 0.01 | - |
| c.504+35A>G | - | rs3219487 | N | 8 (13.6) | - | 0.06 | - |
| c.701T>A | Val234Gly | - | D/Novel | 1 (1.7) | 0 (0) | - | 0.798 |
| c.1014 G>C | Gln338His | rs3219489 | N | 19( | - | 0.31 | - |
| c.1171 G>T | Val390Leu | - | Novel | 1 (1.7) | 0 (0) | - | 0.335 |
| c.1431G>C | Thr477Thr | rs74318065 | N | 1 (1.7) | 0 (0) | 0.01 | - |
| c.1477-40C>G | - | rs3219493 | N | 5 (8.5) | - | 0.06 | - |
| B, | |||||||
| Frequency n (%) | |||||||
| Nucleotide change(s) | Effect | SNP | Clinical significance[ | Cases (n=59) | Controls (n=120) | Word population MAF[ | Mutpred value |
| c.137 G>A | Arg46Gln | rs104893751 | D | 1 (1.7) | 0 (0) | <0.01 | - |
| c.253G>A | Ala85Thr | rs17050550 | VUS | 1 (1.7) | 0 (0) | <0.01 | - |
| c.384 G>A | Gln128Gln | - | Novel | 1 (1.7) | 0 (0) | - | - |
| c.667G>A | Ala223Thr | - | Novel | 1 (1.7) | 0 (0) | - | 0.095 |
| c.899G>A | Gly300Glu | rs548981683 | VUS | 1 (1.7) | 0 (0) | <0.01 | - |
| c.923 G>A | Gly308Glu | rs113561019 | VUS | 1 (1.7) | 0 (0) | <0.01 | - |
| c.977 C>G | Ser326Cys | rs1052133 | N | 23( | - | 0.30 | - |
aResults based on the ClinVar-NCBI database.
bResults based on Ensembl genome browser 9. The pathogenicity of novel missense mutations was predicted using MutPred2 with a cut-off value of 0.61. D, deleterious; N, most likely neutral; VUS, variant of unknown clinical significance; SNP, single polymorphic nucleotide; MAF, minor allele frequency.
Clinical and molecular characteristics of cases carrying rare MUTYH and OGG1 variants.
| Case code | Age range at diagnosis (years) | Cancer type | Direct BC/OC transmission | Family history | ||
|---|---|---|---|---|---|---|
| B12 | 30-35 | - | Gly197Glu | BC | No | - |
| B17 | 25-30 | - | Gly300Glu | BC | No | - |
| B28 | 40-45 | - | BC | No | - | |
| B48 | 40-45 | - | OC | No | OC | |
| B58 | 40-45 | - | Arg46Gln[ | BC | Yes | BC, Leu |
| B62 | 30-35 | - | OC | Yes | OC | |
| B66 | 55-60 | c.36 + 11 C>T | - | BC/TC | No | BC, CC |
| Pro18Leu | ||||||
| Gly25Asp | ||||||
| B75 | 45-50 | - | Ala85Thr | BC | No | BC, OC |
| B105[ | 45-50 | - | BC/OC | Yes | OC |
aPathogenic variants.
bPutative pathogenic variants predicted by MutPred2 software;
cBRCA1 mutation carrier (Glu1373Ter). Novel variants are in bold. BC, breast cancer; OC, ovarian cancer; TC, thyroid cancer; CC, colon cancer; Leu, leukemia.
Demographic characteristics of cases employed for gene expression analysis (n=51).
| Variable | Value |
|---|---|
| Age at diagnosis, years (mean±SD) | 45.2±11.9 |
| Age at sampling, years (mean±SD) | 48.6±12.9 |
| Menopause, n (%) | 26 (51.0) |
| Cigarette smoking, n (%) | 13 (25.5) |
| Type of cancer, n (%) | |
| BC | 47 (92.2) |
| OC | 4 (7.8) |
| Family history n (%) | |
| BC/OC | |
| Direct | 28 (54.9) |
| Indirect | 10 (19.6) |
| Other cancers | |
| Direct | 16 (31.4) |
| Indirect | 5 (9.8) |
BC, breast cancer; OC, ovarian cancer.
Comparison of median gene expression between cases and controls without a family history of cancer.
| Variable | Cases (n=51) | Controls without a family history of cancer (n=43) | Mann-Whitney P-value |
|---|---|---|---|
| Age at sampling, mean±SD | 48.60±12.88 | 50.09±7.49 | 0.159[ |
| 0.58 (0.32-1.72) | 1.04 (0.50-1.88) | 0.035 | |
| 0.93 (0.48-4.36) | 1.91 (0.82-3.09) | 0.358 | |
| 0.09 (0.03-0.32) | 0.14 (0.07-0.21) | 0.297 |
aStudent's t test for unpaired data. IQR, interquartile range.
Correlation among MUTYH, OGG1 and BRCA1 gene expression.
| Group | Rho di Spearman | P-value | Rho di Spearman | P-value |
|---|---|---|---|---|
| Cases | 0.406 | 0.004 | ||
| | 0.186 | 0.200 | ||
| | 0.471 | 0.001 | ||
| Controls without a family history of cancer | 0.036 | 0.840 | ||
| | 0.164 | 0.361 | ||
| | 0.445 | 0.011 | ||