Literature DB >> 33336585

Hypoxia-associated alternative splicing signature in lung adenocarcinoma.

Zhanyu Xu1, Jiangbo Wei1, Fanglu Qin2, Yu Sun1, Weiwei Xiang1, Liqiang Yuan1, Junqi Qin1, Kun Deng1, Tiaozhan Zheng1, Shikang Li1.   

Abstract

Aim: To establish a signature based on hypoxia-related alternative splicing (AS) events for lung adenocarcinoma. Materials & methods: The least absolute shrinkage and selection operator Cox approach was used to construct a prognostic model. A nomogram that integrates the final AS predictor and stage was created. The network of the key AS events and splicing factors was created.
Results: We created a prognostic signature of 11 AS events. Moreover, a nomogram that constitutes the pathological stage and risk was exhibited to be greatly effective in estimating the survival likelihood of lung adenocarcinoma patients.
Conclusion: Herein we developed the first-ever signature based on hypoxia-related AS events with both prognostic predictive power and diagnostic efficacy.

Entities:  

Keywords:  alternative splicing; hypoxia; lung adenocarcinoma; nomogram; prognosis; splicing factor; tumor-infiltrating

Mesh:

Year:  2020        PMID: 33336585     DOI: 10.2217/epi-2020-0399

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  4 in total

1.  Scouting for common genes in the heterogenous hypoxic tumor microenvironment and their validation in glioblastoma.

Authors:  Ashish Bhushan; Ranbala Kumari; Tapasya Srivastava
Journal:  3 Biotech       Date:  2021-09-26       Impact factor: 2.893

2.  Alternative Splicing Events in Immune Infiltration of Lung Adenocarcinoma.

Authors:  Tianpeng Huang; Wei Ye; Xuejiao Lin
Journal:  Med Sci Monit       Date:  2021-12-05

Review 3.  The Effect of Hypoxia and Hypoxia-Associated Pathways in the Regulation of Antitumor Response: Friends or Foes?

Authors:  Raefa Abou Khouzam; Rania Faouzi Zaarour; Klaudia Brodaczewska; Bilal Azakir; Goutham Hassan Venkatesh; Jerome Thiery; Stéphane Terry; Salem Chouaib
Journal:  Front Immunol       Date:  2022-02-08       Impact factor: 7.561

4.  Alternative splicing signature of alveolar type II epithelial cells of Tibetan pigs under hypoxia-induced.

Authors:  Haonan Yuan; Xuanbo Liu; Zhengwen Wang; Yue Ren; Yongqing Li; Caixia Gao; Ting Jiao; Yuan Cai; Yanan Yang; Shengguo Zhao
Journal:  Front Vet Sci       Date:  2022-09-16
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.