| Literature DB >> 33329489 |
Jean Evans I Codjia1,2,3, Qing Cai1, Sheng Wen Zhou1, Hong Luo1, Martin Ryberg4, Nourou S Yorou3, Zhu L Yang1.
Abstract
Many species of Amanita sect. Phalloideae (Fr.) Quél. cause death of people after consumption around the world. Amanita albolimbata, a new species of A. sect. Phalloideae from Benin, is described here. The taxon represents the first lethal species of A. sect. Phalloideae known from Benin. Morphology and molecular phylogenetic analyses based on five genes (ITS, nrLSU, rpb2, tef1-α, and β-tubulin) revealed that A. albolimbata is a distinct species. The species is characterized by its smooth, white pileus sometimes covered by a patchy volval remnant, a bulbous stipe with a white limbate volva, broadly ellipsoid to ellipsoid, amyloid basidiospores, and abundant inflated cells in the volva. Screening for the most notorious toxins by liquid chromatography-high-resolution mass spectrometry revealed the presence of α-amanitin, β-amanitin, and phallacidin in A. albolimbata.Entities:
Keywords: amatoxins; phallotoxins; poisoning risk; taxonomy; tropical Africa
Year: 2020 PMID: 33329489 PMCID: PMC7714729 DOI: 10.3389/fmicb.2020.599047
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
FIGURE 1Distribution of A. albolimbata J.E.I. Codjia, N.S. Yorou and Zhu L. Yang: (a) Gallery forest associated with Uapaca guineensis. (b) Woodland associated with Uapaca togoensis and Isoberlinia doka. (c) Location of the sampling sites.
Taxa of Amanita included in molecular phylogenetic analyses.
| Species name | Collection or collector no. | Country of origin | GenBank accession no. | ||||
| ITS | nrLSU | β | |||||
| DSN062 | Madagascar | KX185611 | KX185612 | – | – | – | |
| JEIC0707 | Benin | MT966936 | MT966943 | MT966959 | MT966956 | MT966951 | |
| JEIC0739 | Benin | MT966935 | MT966942 | MT966963 | MT966955 | MT966950 | |
| JEIC0667 | Benin | MT966932 | MT966939 | MT966958 | MT966953 | MT966947 | |
| JEIC0675 | Benin | MT966934 | MT966941 | MT966962 | – | MT966949 | |
| JEIC0653 | Benin | MT966933 | MT966940 | MT966961 | MT966954 | MT966948 | |
| JEIC0638 | Benin | MT966931 | MT966938 | MT966960 | MT966952 | MT966946 | |
| HKAS94241 | Benin | – | MT966944 | MT966964 | MT966957 | – | |
| HKAS93847 | Benin | MT966937 | MT966945 | – | – | – | |
| RET377-9 | United States | KJ466374 | KJ466434 | – | KJ481936 | KJ466501 | |
| BZ2015-01 | Thailand | KY747462 | – | KY656879 | – | KY656860 | |
| BZ2015-02 | Thailand | KY747463 | – | KY656880 | – | KY656861 | |
| JD 1304 | Rwanda | MK570920 | MK570927 | MK570937 | MK570940 | MK570916 | |
| JD 1257 | Rwanda | MK570919 | MK570926 | – | – | – | |
| TS 591 | Tanzania | MK570921 | MK570928 | – | – | – | |
| PERTH08776067 | Australia | KY977732 | KY977704 | MF000755 | MF000750 | MF000742 | |
| PERTH08776059 | Australia | – | KY977705 | MF000754 | – | – | |
| PERTH08776040 | Australia | – | KY977708 | – | MF037234 | MF000743 | |
| PERTH8809828 | Australia | – | KY977707 | MF000758 | MF000751 | MF000746 | |
| PERTH8809860 | Australia | – | MF000757 | – | MF000745 | ||
| PERTH8809763 | Australia | – | KY977709 | – | – | MF000747 | |
| HKAS74673 | China | KJ466375 | KJ466435 | KJ466590 | KJ481937 | KJ466502 | |
| HKAS75774 | China | JX998027 | JX998052 | KJ466591 | JX998001 | KJ466503 | |
| HKAS75775 | China | JX998026 | JX998053 | KJ466592 | JX998002 | KJ466504 | |
| HKAS75776 | China | JX998025 | JX998051 | KJ466593 | JX998003 | KJ466505 | |
| HKAS75780 | China | JX998023 | JX998048 | KJ466595 | JX997995 | KJ466507 | |
| HKAS75781 | China | JX998021 | JX998050 | KJ466596 | JX997994 | KJ466508 | |
| HKAS75782 | China | JX998022 | JX998049 | KJ466597 | JX997996 | KJ466509 | |
| HKAS79685 | China | KJ466377 | KJ466437 | KJ466594 | KJ481938 | KJ466506 | |
| HKAS83694 | China | – | MH486553 | MH486020 | MH508824 | MH485540 | |
| HKAS52727 | China | JX998024 | JX998047 | KJ466599 | – | KJ466511 | |
| PERTH08776121 | Australia | KU057387 | KY977712 | MF000756 | MF000752 | MF000748 | |
| HKAS89004 | China | – | KU168387 | KU168388 | KU168386 | KU168389 | |
| HKAS77332 | China | KJ466411 | KJ466474 | – | KJ481992 | KJ466578 | |
| HKAS77333 | China | KJ466412 | KJ466475 | KJ466660 | KJ481993 | KJ466579 | |
| P Pirot SN | Madagascar | MK570922 | MK570929 | MK570938 | MK570941 | MK570917 | |
| TS 1061 | Tanzania | MK570923 | MK570930 | – | – | – | |
| HW SN | Australia | MK570924 | MK570931 | MK570939 | MK570942 | MK570918 | |
| RET 623-7 | Australia | KP757875 | KP757874 | – | – | – | |
| HO581533 | Australia | KY977714 | KY977713 | MF000753 | MF000759 | MF000760 | |
| HKAS77324 | China | KJ466409 | KJ466472 | KJ466639 | KJ481974 | KJ466553 | |
| HKAS75555 | China | KJ466408 | KJ466471 | KJ466638 | KJ481973 | KJ466552 | |
| HMJAU20469 | China | KJ466410 | KJ466473 | KJ466640 | KJ481975 | KJ466554 | |
| HKAS79686 | United States | KJ466381 | MH486688 | KJ466607 | KJ481947 | KJ466518 | |
| HKAS82350 | China | MH508485 | MH486737 | MH486163 | MH508971 | MH485668 | |
| HKAS75483 | China | KJ466384 | KJ466445 | KJ466623 | KJ481959 | KJ466535 | |
| HKAS75786 | China | JX998037 | JX998054 | KJ466627 | JX998011 | KJ466539 | |
| HKAS77349 | China | KJ466389 | KJ466449 | KJ466628 | KJ481961 | KJ466540 | |
| HKAS79049 | China | – | KT971342 | KT971345 | KT971343 | KT971346 | |
| HKAS79601 | China | – | – | – | KT971344 | KT971347 | |
| MB-102659 | Germany | – | MH486754 | – | – | – | |
| HKAS75773 | United States | JX998031 | JX998060 | KJ466612 | JX998000 | KJ466523 | |
| Qs6 | France | – | – | EU886739 | – | ||
| AY325883 | South Africa | – | AY325883 | – | – | – | |
| HKAS101393 | China | – | MH486806 | MH486218 | MH509031 | MH485722 | |
| HKAS77335 | China | KJ466393 | KJ466455 | KJ466621 | KJ481957 | KJ466532 | |
| HKAS77279 | China | KJ466392 | KJ466454 | KJ466620 | KJ481956 | KJ466531 | |
| HKAS77120 | China | MH508547 | KJ466453 | KJ466619 | KJ481955 | KJ466530 | |
| RET491-7 | United States | KJ466421 | KJ466486 | KJ466602 | KJ481942 | KJ466514 | |
| RET478-6 | United States | KJ466419 | KJ466484 | KJ466600 | KJ481940 | KJ466512 | |
| RET490-1 | United States | KJ466420 | KJ466485 | KJ466601 | KJ481941 | KJ466513 | |
| HKAS75770 | China | JX998034 | JX998062 | KJ466653 | JX997999 | KJ466571 | |
| HKAS75771 | China | JX998032 | JX998063 | KJ466654 | JX997997 | KJ466572 | |
| HKAS75772 | China | JX998033 | JX998061 | KJ466655 | JX997998 | KJ466573 | |
| HKAS77325 | China | KJ466425 | KJ466490 | KJ466656 | KJ481988 | KJ466574 | |
| LHJ140923-41 | China | KP691683 | KP691692 | KP691701 | KP691670 | KP691711 | |
| LHJ140923-55 | China | KP691680 | KP691693 | KP691702 | KP691671 | KP691712 | |
| LHJ140926-11 | China | KP691682 | KP691688 | KP691703 | KP691672 | KP691708 | |
| HKAS90176 | China | MH508650 | MH486948 | MH486341 | MH509167 | MH485847 | |
| HKAS56694 | Finland | JX998030 | JX998058 | KJ466664 | JX998007 | KJ466583 | |
| HMJAU23303 | China | KJ466430 | KJ466497 | KJ466666 | KJ481998 | KJ466586 | |
| HKAS71040 | Japan | KJ466429 | KJ466496 | KJ466665 | KJ481997 | KJ466584 | |
| HKAS99663 | China | MH508655 | MH486958 | MH486351 | MH509178 | MH485855 | |
| GDGM29241 | China | KJ466432 | KJ466499 | KJ466668 | KJ482000 | KJ466588 | |
| RET 155-1 | United States | – | HQ539701 | – | – | – | |
Instrument parameters for the UHPLC-MS analyses.
| Parameter | Value |
| HPLC parameters | |
| Analytical column | C18, 4.6 × 100 mm I.D., particle size 2.7 μm, Agilent Technologies |
| Column temperature | 28°C |
| Mobile phase A | 0.02 M aqueous ammonium acetate-acetonitrile (90:10, vol/vol) |
| Mobile phase B | 100% acetonitrile |
| Injection volume | 10 μL |
| Binary pump gradient | Time (min) %A %B Flow (mL/min) |
| and flow | 0.00 100 0 0.500 |
| 2.00 100 0 0.500 | |
| 10.00 0 100 0.500 | |
| Electrospray MS parameters | |
| Ionization mode | Positive ESI |
| Scan range | 500–1,700 |
| Gas temperature | 350°C |
| Gas flow | 8 L/min (N2) |
| Capillary voltage | 3.5 kV |
FIGURE 2Phylogenetic relationship and placement of Amanita albolimbata within A. sect. Phalloideae inferred from the combined dataset (ITS, nrLSU, rpb2, tef1-α, and β-tubulin) using maximum likelihood (ML). Bootstrap values ≥50% and Bayesian posterior probabilities ≥0.90 are reported on branches. Sequences generated in this study are highlighted in red.
FIGURE 3Basidiomata of A. albolimbata [(a) holotype JEIC0739; (b) JEIC0653; (c) JEIC0667; (d) HKAS93847]. Scale bar: 1 cm (photos by Codjia J.E.I. and Gang Wu).
FIGURE 4Microscopic features of A. albolimbata. Holotype JEIC0739 [(A) hymenium and subhymenium; (B) basidiospores]. HKAS93847 [(C) pileipellis; (D) elements of inner part of volva]. Scale bars: a–d = 10 μm.
FIGURE 5Mass spectrogram of cyclic peptides produced in A. albolimbata. (A) α-Amanitin. (B) β-Amanitin. (C) Phallacidin.