Inge Bos1, Camilla Terenzi2, Joris Sprakel1. 1. Physical Chemistry and Soft Matter, Wageningen University & Research, Stippeneng 4, 6708 WE Wageningen, The Netherlands. 2. Laboratory of Biophysics, Wageningen University & Research, Stippeneng 4, 6708 WE Wageningen, The Netherlands.
Abstract
Chemical feedback between building block synthesis and their subsequent supramolecular self-assembly into nanostructures has profound effects on assembly pathways. Nature harnesses feedback in reaction-assembly networks in a variety of scenarios including virion formation and protein folding. Also in nanomaterial synthesis, reaction-assembly networks have emerged as a promising control strategy to regulate assembly processes. Yet, how chemical feedback affects the fundamental pathways of structure formation remains unclear. Here, we unravel the pathways of a templated reaction-assembly network that couples a covalent polymerization to an electrostatic coassembly process. We show how the supramolecular staging of building blocks at a macromolecular template can accelerate the polymerization reaction and prevent the formation of kinetically trapped structures inherent to the process in the absence of feedback. Finally, we establish a predictive kinetic reaction model that quantitatively describes the pathways underlying these reaction-assembly networks. Our results shed light on the fundamental mechanisms by which chemical feedback can steer self-assembly reactions and can be used to rationally design new nanostructures.
Chemical feedback between building block synthesis and their subsequent supramolecular self-assembly into nanostructures has profound effects on assembly pathways. Nature harnesses feedback in reaction-assembly networks in a variety of scenarios including virion formation and protein folding. Also in nanomaterial synthesis, reaction-assembly networks have emerged as a promising control strategy to regulate assembly processes. Yet, how chemical feedback affects the fundamental pathways of structure formation remains unclear. Here, we unravel the pathways of a templated reaction-assembly network that couples a covalent polymerization to an electrostatic coassembly process. We show how the supramolecular staging of building blocks at a macromolecular template can accelerate the polymerization reaction and prevent the formation of kinetically trapped structures inherent to the process in the absence of feedback. Finally, we establish a predictive kinetic reaction model that quantitatively describes the pathways underlying these reaction-assembly networks. Our results shed light on the fundamental mechanisms by which chemical feedback can steer self-assembly reactions and can be used to rationally design new nanostructures.
In
nature, the biosynthesis of macromolecular building blocks and their
assembly often occur simultaneously and within the same cellular compartment.[1−4] The spatiotemporal colocalization of covalent and supramolecular
reactions, involving the same molecular compounds, results in feedback
between the different primary chemical reactions. Chemical feedback
in these coupled reaction-assembly networks has profound effects on
both the kinetics of the process and the final products that the coupled
reactions yield. For example, the structure of virions is different
when the translation of viral coat proteins occurs simultaneously
with the DNA-templated assembly process as compared to the case when
all proteins are already present at the start of the assembly.[3,5,6] Also in protein biosynthesis itself,
folding of the polypeptide chain into the desired tertiary structure
can be regulated by the rate of its translation.[4,7]Supramolecular assembly strategies have become a paradigm in the
creation of a plethora of synthetic nanomaterials.[8−11] However, while in nature reaction
and assembly are invariably coupled, for synthetic materials the synthesis
of the building blocks and their subsequent self- or coassembly have
traditionally been separated in both space and time. This facilitates
experimental control on the purity and characterization of the building
blocks and of the details of the assembly process, but it also limits
the structures than can be made, and the pathways by which these are
reached, as the covalent reaction cannot be used to tune the assembly.
In recent years, interest in the use of coupled reaction-assembly
processes has emerged as a control mechanisms for creating synthetic
nanomaterials. A seminal example is polymerization-induced self-assembly
(PISA), in which covalent polymerizations of amphiphilic macromolecules
are coupled to the formation of micellar and vesicular structures
that could not have been created using the classical spatiotemporal
separation of the covalent and supramolecular processes.[12] Many examples of this strategy have now been
reported.[13−15] More recently, this approach has been extended to
templated assembly reactions. In polymerization-induced electrostatic
self-assembly (PIESA), the polymerization of a polyelectrolyte occurs
in the presence of oppositely charged macroions that serve as a molecular
template for the assembly.[16−20] This is of particular interest because templated assembly, in which
a macromolecular template acts as a blueprint for the assembly process,
is a common approach used by nature to guide multicomponent systems
across their complex supramolecular energy landscapes to the desired
final structure.[21−23] Yet, the control of templated assembly in the synthetic
realm remains challenging.[24]Despite
the promise of these templated reaction-assembly networks, mechanistic
insights into the emergence of chemical feedback in these networks
remain elusive. For example, it is unclear how the kinetic pathways
across underlying elementary reaction steps are affected by the coupling.
Moreover, comprehensive and predictive models that capture the essence
of chemical feedback in these chemical networks are lacking. Yet,
these insights are crucial; not only to optimize and rationally design
synthetic reaction-assembly networks for nanomaterial fabrication,
but also to provide a deeper understanding of how chemical feedback
influences structure formation in vivo.In this paper, we explore
chemical feedback in a templated reaction-assembly network that couples
covalent polymerizations to supramolecular electrostatic assembly
on a macromolecular template. To unveil the kinetic pathways that
underlie reaction progress, we perform time-resolved and in situ measurements
based on high-resolution NMR spectroscopy and spectrally resolved
relaxometry, complemented with light-scattering studies. While classical
NMR spectroscopy has been used previously to study reaction-assembly
networks,[13,16−18] we extend these NMR
spectroscopy measurements with spectrally resolved NMR relaxation
measurements to probe the local dynamics of the separate components,
which is essential to unravel the underlying kinetic pathways of the
network. Our experimental results reveal how the preassembly of monomers
onto the oppositely charged template accelerates the covalent reaction
and provides feedback to alter the supramolecular assembly process.
On the basis of these experimental data, we establish a kinetic reaction-assembly
model that quantitatively describes the underlying reaction pathways.
These results can help both optimizing the design of synthetic reaction-assembly
materials and resolving the role of chemical feedback in structure
formation in vivo.
Results and Discussion
Our templated
reaction-assembly network consists of a neutral macromolecular chain-transfer
agent P, positively charged monomers M as reagents and a negatively
charged polyelectrolyte that forms the coassembly template, consisting
of template binding sites S (Figure a). Specifically, we use poly(ethylene glycol methyl)ether
4-cyano-4-(propylsulfanylthiocarbonyl)-sulfanylpentanoate (PEG-CTA)
as macromolecular chain-transfer agent, poly(sulfopropylmethacrylate)
(PSPMA) with a degree of polymerization of 47 as the negative template,
and vinylbenzyltrimethylammonium chloride (VBTAC) as the positive
monomer. Reversible addition–fragmentation chain transfer (RAFT)
polymerization of the positive monomer occurs at the end of the neutral
chain, resulting in the growth of the diblock copolymer P–M. In the standard case, the targeted degree
of polymerization of the positive block n is 50 and
the ratio of monomer to template sites is 1:1. The reaction is performed
at a potassium chloride (KCl) concentration of 35 mM. Both cationic
monomer and the resulting cationic block of the diblock copolymer
can bind to the template (Figure b), as evidenced by isothermal titration calorimetry
measurements (Figure S1). When the cationic
block grows sufficiently long, its binding to the anionic template
induces micelle formation by complex coacervation. The complex of
oppositely charged polyelectrolytes forms the micellar core, and the
neutral block forms its corona. These charge-driven micelles are often
referred to as complex coacervate core micelles (C3Ms).[25]
Figure 1
Templated reaction-assembly network. (a) Different components
of the network. (b) Schematic overview of the templated reaction-assembly
network and simplified representation of the kinetic model. (c) Pseudo-first-order
kinetic plot of the polymerization reaction with and without the template.
Solid lines indicate kinetic model predictions for the polymerization
with the template kp = 0.36 mM–1 h–1, kb = ka = 12 mM–1 h–1, kb = 500kb, kd(n)
= ω0 exp(−nEa/kBT) with ω0 = 3.1 × 104 h–1, and Ea = 6kBT, kf = kd(1), Vtot/Vb = 8, a = 3.0, tshift = 3.5 h, [Mtot]0 = 35 mM, [Stot]0 = 35
mM, and [P–M0tot]0 = 0.7 mM. For the polymerization
without the template, the same model parameters are used except for kb = ka = kf = kd = 0, Vtot/Vb = 0, a = 0.9, tshift = 5.0 h, and
[Stot]0 = 0. In both cases, the overall concentrations
of the compounds, the polymerization rate kp, the empirical constants a and tshift, and the ratio between kb and kf follow from experiments, the
values for ω0 and Ea are
based on literature values,[26] and the values
of Vtot/Vb and kb are adjusted
to fit the experimental data (cf. Supporting Information Section 10.2 for further details). (d) Comparison of the end structures
formed by (1) performing the polymerization reaction without the template
and subsequently mixing the resulting diblock with the template at
44 °C and (2) performing the polymerization reaction in the presence
of the template at 44 °C.
Templated reaction-assembly network. (a) Different components
of the network. (b) Schematic overview of the templated reaction-assembly
network and simplified representation of the kinetic model. (c) Pseudo-first-order
kinetic plot of the polymerization reaction with and without the template.
Solid lines indicate kinetic model predictions for the polymerization
with the template kp = 0.36 mM–1 h–1, kb = ka = 12 mM–1 h–1, kb = 500kb, kd(n)
= ω0 exp(−nEa/kBT) with ω0 = 3.1 × 104 h–1, and Ea = 6kBT, kf = kd(1), Vtot/Vb = 8, a = 3.0, tshift = 3.5 h, [Mtot]0 = 35 mM, [Stot]0 = 35
mM, and [P–M0tot]0 = 0.7 mM. For the polymerization
without the template, the same model parameters are used except for kb = ka = kf = kd = 0, Vtot/Vb = 0, a = 0.9, tshift = 5.0 h, and
[Stot]0 = 0. In both cases, the overall concentrations
of the compounds, the polymerization rate kp, the empirical constants a and tshift, and the ratio between kb and kf follow from experiments, the
values for ω0 and Ea are
based on literature values,[26] and the values
of Vtot/Vb and kb are adjusted
to fit the experimental data (cf. Supporting Information Section 10.2 for further details). (d) Comparison of the end structures
formed by (1) performing the polymerization reaction without the template
and subsequently mixing the resulting diblock with the template at
44 °C and (2) performing the polymerization reaction in the presence
of the template at 44 °C.
Phases
in the Reaction-Assembly Process
To unravel the kinetic pathways
that underlie this templated reaction-assembly network, we use a combination
of NMR spectroscopy, spectrally resolved NMR relaxometry, and light
scattering. We use NMR spectroscopy to monitor the monomer conversion
and NMR relaxometry to probe the chemical details of the reaction-assembly
network (Figure S2). The longitudinal relaxation
time T1 and transverse relaxation time T2 both depend on the rotational correlation
time τc of (part of) the molecule, with T1 being mostly sensitive to fast molecular dynamics at
the NMR measurement frequency and T2 being
mostly affected by static sources of restriction in the molecular
reorientational dynamics.[27,28] Therefore, the combination
of T1 and T2 measurements can be used to probe a wide range of mobility time
scales, ranging from the fast dynamics of free monomers to the slow
dynamics of polymers. The in situ determination of both T1 and T2 is complicated by
the relatively large reaction speed compared to the time needed for
quantitative T1 and T2 measurements. To obtain both sufficient time resolution
and sufficient information on the local mobility of the components,
we perform only quantitative T1 measurements
during the reaction while we take the changes in a T2-filtered intensity as a measure for relative changes
in T2. We complement the 1H
NMR measurements with light-scattering measurements: while NMR relaxation
measurements probe the local dynamics of the separate components,
light-scattering measurements can probe the overall assembly of the
different components together. Based on our experimental observations,
we can distinguish four phases in the reaction-assembly process (Figure a), which are explained
below.
Figure 2
Different phases of the reaction-assembly process. (a) Schematic
overview of the four different phases. At increasing reaction times
of the templated reaction-assembly network, (b) 1H NMR
spectra; (c) T1 values for the neutral
block P and monomer M protons, with respective error bars obtained
from single-exponential fitting; (d) T2-filtered NMR spectral intensity (T2-filter
of 2.4 s) for the P and M protons, normalized to their own signal
intensity at the start of the reaction; (e) light-scattering intensity.
Different phases of the reaction-assembly process. (a) Schematic
overview of the four different phases. At increasing reaction times
of the templated reaction-assembly network, (b) 1H NMR
spectra; (c) T1 values for the neutral
block P and monomer M protons, with respective error bars obtained
from single-exponential fitting; (d) T2-filtered NMR spectral intensity (T2-filter
of 2.4 s) for the P and M protons, normalized to their own signal
intensity at the start of the reaction; (e) light-scattering intensity.
Phase I: Induction Period
The reaction network is started
by heating the reaction mixture, which leads to thermal decomposition
of the radical initiator. First, we observe an induction period (Phase
I) during which the monomer conversion is slow as revealed by monitoring
the monomer conversion by 1H NMR spectral measurements
with a 0.02 s T2 filter (Figure c).Already at the start
of this first phase, the situation with the template differs from
the one without the template, in which there is no assembly and hence
no chemical feedback. We observe that the longitudinal relaxation
time T1 of the monomer protons is shorter
with the template than without the template (Table S1). For small molecules free in solution, both T1 and T2 decrease with increasing
rotational correlation time of the molecule τc.[27,28] A decrease in T1 in the presence of
the template thus indicates restricted monomer mobility and can be
explained by binding of monomers to the template. On the basis of T1 measurements, we estimate that initially 50%
of all monomers present binds to the oppositely charged template (Table S1). We note that differences among the T1 values of the monomer protons are caused by
differences in the intramolecular component of the dipole–dipole
relaxation process. The latter process is driven by fluctuating fields
generated via the interaction between two 1H nuclear magnetic
dipoles, and its intramolecular contribution is caused by nuclear
vibrations and rotations within the molecule.[28]The addition of the template substantially shortens the induction
period (Figure c).
We hypothesize that this is due to the local accumulation of monomers
at the macromolecular template, leading to a local increase of monomer
concentration. To verify that a higher (local) concentration can shorten
the induction phase, we performed different polymerizations without
the template at increasing monomer concentration, while keeping the
concentration of chain-transfer agent and initiator the same (Figure a). Increasing the
monomer concentration from 35 to 105 mM indeed shortens the induction
period, while the final pseudo-first-order polymerization rate is
the same in both cases (Figure b). Further increasing the monomer concentration to 175 mM
only has a moderate effect on the induction phase. This reveals that
the induction period consists of two contributions, one which is sensitive
to the monomer concentration and another which is not. The contribution
sensitive to monomer concentration can be explained by the fact that
the first monomer added to a growing chain can have a lower effective
reactivity as compared to subsequently added monomers, which has also
been observed in other RAFT polymerizations.[29] The contribution that is insensitive to monomer concentration is
most likely due to a slow radical build-up at the reaction start,
owing to the relatively low radical concentrations in our RAFT polymerization.
Figure 3
RAFT polymerizations
without the template at different monomer concentrations. (a,b) Polymerization
of the positive monomer (VBTAC) with the neutral block of Figure a as the chain-transfer
agent. (a) Pseudo-first-order kinetic plot of the monomer conversion.
(b) Local slope of the pseudo-first-order kinetic plot of (a) as a
function of time. Error bars indicate uncertainty in the local slope
determination. Solid lines are approximations of the experimental
data based on the function y = x(exp(at – tshift))/(1 + exp(at – tshift)) with x = 0.25 and a = 0.9 and tshift = 5.0 (35 mM) and a =
3.0 and tshift = 3.5 (175 mM). (c,d) Polymerization
of the negative monomer (KSPMA) with the neutral block of Figure a as chain-transfer
agent. (c) Pseudo-first-order kinetic plot of the monomer conversion.
(d) Local slope of the pseudo-first-order kinetic plot of (c) as a
function of time. Error bars indicate uncertainty in the local slope
determination. Solid lines are approximations of the experimental
data based on the function y = x(exp(at – tshift)/(1 + exp(at – tshift)); with x = 0.7 and a = 0.9 and tshift = 5.5 (35 mM) and a =
4.5 and tshift = 6.5 (175 mM).
RAFT polymerizations
without the template at different monomer concentrations. (a,b) Polymerization
of the positive monomer (VBTAC) with the neutral block of Figure a as the chain-transfer
agent. (a) Pseudo-first-order kinetic plot of the monomer conversion.
(b) Local slope of the pseudo-first-order kinetic plot of (a) as a
function of time. Error bars indicate uncertainty in the local slope
determination. Solid lines are approximations of the experimental
data based on the function y = x(exp(at – tshift))/(1 + exp(at – tshift)) with x = 0.25 and a = 0.9 and tshift = 5.0 (35 mM) and a =
3.0 and tshift = 3.5 (175 mM). (c,d) Polymerization
of the negative monomer (KSPMA) with the neutral block of Figure a as chain-transfer
agent. (c) Pseudo-first-order kinetic plot of the monomer conversion.
(d) Local slope of the pseudo-first-order kinetic plot of (c) as a
function of time. Error bars indicate uncertainty in the local slope
determination. Solid lines are approximations of the experimental
data based on the function y = x(exp(at – tshift)/(1 + exp(at – tshift)); with x = 0.7 and a = 0.9 and tshift = 5.5 (35 mM) and a =
4.5 and tshift = 6.5 (175 mM).
Figure 4
Inverted reaction-assembly
network where a negatively charged block is polymerized in the presence
of a positively charged template. (a) Different components of the
inverted reaction-assembly network. (b) Pseudo-first-order kinetic
plots of the monomer conversions for reactions with the template and
without the template. Solid lines indicate model predictions for the
polymerization with the template kp =
1.0 mM–1 h–1, kb = ka = 12 mM–1 h–1, kb = 500kb, kd(n) = ω0 exp(−nEa/kBT) with ω0 = 3.1 × 104 h–1 and Ea = 6kBT, kf = kd(1), Vtot/Vb = 8, a = 4.5 and tshift = 6.5 h, [Mtot]0 = 35 mM,
[Stot]0 = 35 mM, and [P–M0tot]0 = 0.7 mM. For the polymerization without the template, the same
model parameters are used except for kb = ka = kf = kd = 0, Vtot/Vb = 0, a = 0.9, tshift = 5.5 h, and [Stot]0 = 0. At increasing reaction times of the templated reaction-assembly
network, (c) 1H NMR spectra; (d) T1-values for neutral block C and the monomer A protons, with
respective error bars obtained from single-exponential fitting; (e) T2-filtered NMR spectral intensity (T2-filter of 2.4 s) for the C and A protons, normalized
to their own signal intensity at the start of the reaction; (f) light-scattering
intensity.
Phase II: Start Main Reaction
After the induction phase,
the monomer conversion rate increases strongly, signaling the start
of the main reaction (Phase II). For the polymerization with the template,
the polymerization rate is strongly enhanced in this phase, as shown
by the larger slope in the pseudo-first-order kinetic plot of the
monomer conversion (Figure c). This is also due to the local increase of monomer concentration
near the template due to binding and highlights the role of the template
as a supramolecular staging area for the chemical reaction. We note
that in another PIESA process the polymerization with the template
was slower than without the template.[18] We hypothesize that this difference with our system is caused by
the ∼17 times larger template concentration that was used in
this other case, which will increase the viscosity and thus slow down
the overall polymerization kinetics.During Phase II, the T1 of the monomer protons increases (Figure c), signaling an
increase in the monomer mobility. The T2-filtered 1H NMR intensity decreases for all monomer protons
except for M6 (Figure d). This trend can be explained by noticing that an
increase in the T2-filtered signal intensity
can be caused by an increase either in the monomer concentration and/or
in T2. Because the monomer concentration
decreases in Phase II, the behavior of M6 in Figure d is due to an increase in T2, which confirms the increased monomer mobility
as seen by T1. For the other monomer protons,
their T2 also presumably increases in
Phase II, but because their T2 is longer
than that of M6, the underlying intensity increase that
is induced by T2 increase becomes negligible
compared to the intensity decay because of monomer consumption (Supporting Information Section S3.2). These changes
in T1 and T2 occur only for the polymerization with the template (Figure S3) and are thus the result of chemical
feedback.The onset of faster monomer reorientational dynamics
in Phase II is the result of competitive template binding between
the monomer and growing diblock copolymer, which binds with a higher
affinity because of multivalency. The binding of the polymerizing
positive blocks to the template is shown by the broadening of the
template peaks in the 1H NMR spectrum (Figure b). Broader peaks indicate
a smaller T2 and therefore a decrease
in template mobility. The result of the competition between monomers
and polymerizing blocks is that the concentration of template-bound
monomer decreases, slowing down the polymerization rate at the template,
as can be seen from the decrease in the slope of the monomer conversion
during Phase II (Figure c).[18]
Phase III: Nanostructure
Formation
In Phase III, coassembly of the templates with
growing diblock copolymers leads to the nucleation of microphase-separated
objects, as revealed by an increase in scattered light intensity (Figure e). Nanostructure
formation in Phase III results in the net reduction of both T1 and T2 values
of the monomer protons, except for M6, suggesting that
nanostructure formation somehow hinders the reorientational dynamics
of the monomer (Figure c,d). Three possible causes, and combinations thereof, can be identified
to explain the observed reduction in monomer mobility: (i) the incorporation
of bound monomers within the nanostructures leads to a decrease in
τc; (ii) an increase in the bound monomer fraction;
(iii) an increase in the viscosity of the sample. The T1 of the M6 protons stays constant in Phase
III, presumably because of that this chemical group is less affected
by monomer incorporation in the nanostructure or viscosity increase
or because increasing spectral overlap with the adjacent polymer peak
prevents accurate evaluation of T1 for
the M6 peak. Another possibility is that the τc of the M6 protons is around , where ωL is the Larmor frequency. At this point, T1 is less sensitive to changes in τc.[27,28]
Phase IV: Nanostructure Rearrangement
During Phase IV, continued polymerization and equilibration lead
to a decrease in light-scattering intensity and apparent hydrodynamic
radius (Figures e
and S4). A possible explanation for this
decrease is the transition from initially elongated objects into smaller
spherical micelles. It is known that weakening of the electrostatic
interactions can induce a change in shape from spheres to ellipsoids,
for example, by the increase in ionic strength.[30] On the contrary here, as time progresses, the electrostatic
interactions grow in strength as the length of the positive block
increases, which could result in the transition from initially elongated
objects into smaller spherical micelles. This rearrangement occurs
only for shorter template lengths, while for longer templates the
light-scattering intensity only increases during polymerization with
a lower final intensity and smaller apparent hydrodynamic radius than
for the shorter template lengths (Figure S5). This is in accord with literature results where the formation
of ellipsoidal micelles was also observed only for shorter homopolymer
lengths.[30] In fact, also for micelles formed
at low concentration from the components of our system, transitions
to larger nanostructures at ionic strengths above 10 mM happen only
for the short template lengths (Figure S5). Future time-resolved small-angle X-ray scatting (SAXS) measurements
could help to verify whether the decrease in light scattering is indeed
caused by rearrangements into smaller structures. At the moment, we
cannot exclude that other factors than the nanostructure size have
affected the light-scattering intensity because the concentration
of the reaction-assembly network is relatively high for light-scattering
experiments, and therefore multiple-scattering events or interactions
between the different scattering objects might occur, which can affect
the light-scattering intensity and the apparent hydrodynamic radius.The nanostructure formation and rearrangement can also be observed
from the decrease in T2 of the neutral
block (Figure d).
This decrease in T2 agrees well with the
proposed micelle formation: when the neutral block becomes integrated
into a dense micellar corona, its mobility is restricted, resulting
in a lower T2. The neutral block in the
final equilibrium nanostructures exhibits three distinct T2 values, while at the start of the reaction it has a
single T2 (Figure S6). The three distinct T2 values
reveal the occurrence of three main local mobility environments for
protons that might be assigned to, in order of increasing local mobility,
protons close to micelle core, protons in the middle of the micelle
corona, and protons in the outer part of the micelle corona. This
might also explain why the T2-filtered
signal decreases during Phase IV: the part of the corona close to
the core becomes denser when the micelles become spherical. This means
that locally the mobility of the protons close to the core gets lower,
and thus, the overall average T2 decreases
even though protons further away from the core can have an increase
in mobility upon transition to spherical micelles and their T2 might slightly increase. While, as expected, T2 is sensitive to slow reorientational dynamic
modes, we find that the T1 of the neutral
block is not much affected by the nanostructure formation (Figure c). It might be that
the τc of the neutral block is around , where T1 is less sensitive to changes
in τc.[27,28] Similar behavior of T1 and T2 of the
neutral block upon C3M formation have been measured earlier at equilibrium
conditions.[31]The occurrence of these
four different phases is not restricted to this particular reaction-assembly
network: also for a shorter and longer template length, we observe
the same phases (Figure S5), with the nanostructure
reorganization phase being absent for the longest template length,
as discussed above. This demonstrates the relative robustness of our
observations. We note that variations between repetitions of the same
reaction-assembly experiment (Figures S5 and S7) could be explained by small differences in the trace amount of
oxygen present, which results in slightly different radical concentrations.
These variations do not affect the general trends: in all these measurements,
the polymerization rate in the presence of the template is faster
than that in the absence of the template, and at certain point in
the reaction, the polymerization rate decreases.
Inverted System
To further verify the robustness of our description of these templated
reaction-assembly networks, we invert the system by polymerizing a
negatively charged block in the presence of a positively charged template
(Figure a). In this way, we change both the monomer–monomer
interactions at the template (Figure S1) and the polymerization reactivity (Figure c,d). The inverted system also shows a feedback-enhanced
reaction rate as compared to the polymerization without the template
(Figure b). In addition, T1 measurements show that also for the inverted
system about 50% of all monomers initially binds to the oppositely
charged template (Table S2). Furthermore,
the inverted system undergoes the same reaction-assembly network phases:
initially the monomer conversion is also slow (Figure b). Subsequently, when the main reaction
starts, the template peaks also broaden (Figure c) and the monomer T1 increases (Figure d). The monomer T1 decreases again
when the nanostructure formation starts and also the T2 of the neutral block decreases upon nanostructure formation
(Figure e). The inverted
system does not show nanostructure rearrangement: the scattered light
intensity only increases during the polymerization reaction (Figure f), similar to the
reaction-assembly network with the longest negatively charged template.
This is because the positively charged template is probably longer
than the negatively charged template that we used for Figure .Inverted reaction-assembly
network where a negatively charged block is polymerized in the presence
of a positively charged template. (a) Different components of the
inverted reaction-assembly network. (b) Pseudo-first-order kinetic
plots of the monomer conversions for reactions with the template and
without the template. Solid lines indicate model predictions for the
polymerization with the template kp =
1.0 mM–1 h–1, kb = ka = 12 mM–1 h–1, kb = 500kb, kd(n) = ω0 exp(−nEa/kBT) with ω0 = 3.1 × 104 h–1 and Ea = 6kBT, kf = kd(1), Vtot/Vb = 8, a = 4.5 and tshift = 6.5 h, [Mtot]0 = 35 mM,
[Stot]0 = 35 mM, and [P–M0tot]0 = 0.7 mM. For the polymerization without the template, the same
model parameters are used except for kb = ka = kf = kd = 0, Vtot/Vb = 0, a = 0.9, tshift = 5.5 h, and [Stot]0 = 0. At increasing reaction times of the templated reaction-assembly
network, (c) 1H NMR spectra; (d) T1-values for neutral block C and the monomer A protons, with
respective error bars obtained from single-exponential fitting; (e) T2-filtered NMR spectral intensity (T2-filter of 2.4 s) for the C and A protons, normalized
to their own signal intensity at the start of the reaction; (f) light-scattering
intensity.
Effect of Reactant Stoichiometry
So far, we have focused on reaction networks with a 1:1 ratio of
monomer-to-template sites. The reaction-assembly process and the underlying
kinetics can be tuned by various parameters, such as the reactant
stoichiometry. If we add an excess of monomer compared to the number
of template sites at a 3:1 ratio, first nanostructures form and then
disassemble again (Figure a). This is similar to what has been observed for another
PIESA reaction[16] and agrees with the observations
that C3Ms can be formed only around equal charge stoichiometry.[25,32]
Figure 5
Effect
of the monomer-to-template ratio Mtot/Stot.
(a) Light-scattering intensity during the reaction-assembly process.
(b) Pseudo-first-order kinetic plot of the reaction-assembly process.
Solid lines indicate model predictions with the same model parameters
as in Figure , except
for the initial monomer concentration for Mtot/Stot = 3:1, which is [Mtot]0 = 105 mM. (c) T1-values of P and M protons during the reaction-assembly
process for Mtot/Stot = 3:1 with respective
error bars obtained from single-exponential fitting. (d) Light-scattering
intensity as a function of fractional polymer charge ratio fpol+. (e) Positive polymer fraction fpol+ during the reaction-assembly
process. The dashed line indicates the point of equal charge stoichiometry
of the oppositely charged polyelectrolytes. (f) Changes in the T2-filtered NMR spectral intensity (T2-filter of 2.4 s) for the P and M protons, normalized
to their own signal intensity at the start of the reaction, for the
Mtot/Stot = 3:1 reaction-assembly process.
Effect
of the monomer-to-template ratio Mtot/Stot.
(a) Light-scattering intensity during the reaction-assembly process.
(b) Pseudo-first-order kinetic plot of the reaction-assembly process.
Solid lines indicate model predictions with the same model parameters
as in Figure , except
for the initial monomer concentration for Mtot/Stot = 3:1, which is [Mtot]0 = 105 mM. (c) T1-values of P and M protons during the reaction-assembly
process for Mtot/Stot = 3:1 with respective
error bars obtained from single-exponential fitting. (d) Light-scattering
intensity as a function of fractional polymer charge ratio fpol+. (e) Positive polymer fraction fpol+ during the reaction-assembly
process. The dashed line indicates the point of equal charge stoichiometry
of the oppositely charged polyelectrolytes. (f) Changes in the T2-filtered NMR spectral intensity (T2-filter of 2.4 s) for the P and M protons, normalized
to their own signal intensity at the start of the reaction, for the
Mtot/Stot = 3:1 reaction-assembly process.Changing the reactant stoichiometry affects the
relative polymerization rate and the evolution of T1 and T2 of the monomers and
neutral block during the reaction. The relative polymerization rate
is slower when we add an excess of monomer (Figure b) because a smaller fraction of the total
monomer can preassemble at the template, as it becomes saturated.
This is reflected by the larger monomer T1 values at the start of the reaction (Figure c). The increase in T1 at the start of the main reaction again indicates expulsion
of the monomer from the template because of binding competition and
the subsequent T1 decrease again coincides
with the start of the nanostructure formation, which reduces the monomer
mobility. As the reaction time progresses, the point of equal charge
stoichiometry is crossed, leading to an excess of positive block units
as compared to template sites. This results in the disintegration
of the nanostructures into soluble complexes, where the excess part
of the positive block is free in solution and the other part of the
positive block is bound to the template, as evidenced by 1H NMR spectroscopy (Figure S8). The nanostructure
disassembly results in an increase of the T1 of the monomer protons. After 4 h, when the nanostructures are completely
disassembled (Figure a), the T1-values of the monomers in
the reaction network values have approached the T1 values of free monomers in the absence of a template
(Table S1). After this point, the T1 values of the monomers remain constant. The
apparent decrease of T1 of the M2 proton peak is probably because of partial overlap with the NMR
signal of the adjacent peak of positive polymer formed during the
reaction. The measured T1 of the M6 proton peak is not much affected by the nanostructure formation,
as was also observed in the 1:1 ratio case. The T2-filtered intensity of the monomers shows similar trends
as T1 (Figure f), except in that it decreases after 4 h,
most probably because of the concurrent effects due to variations
in monomer concentration and in T2: after
4 h, the amount of monomer keeps decreasing, thus lowering the T2-filtered intensity, while T2 probably remains constant. The decrease and subsequent
increase in T2-filtered intensity of the
neutral block reflect the nanostructure formation and subsequent disassembly.The change in stoichiometry not only affects the reaction rate
and the final structure formed but also the (intermediate) structures
that are formed at equal charge stoichiometry of both polyelectrolytes.
The polyelectrolyte charge stoichiometry can be expressed by the fractional
polymer charge ratio fpol+ =
[pos]/([pos] + [neg]), where [pos] and [neg] are the concentrations
of monomers that are part of a polycation and polyanion, respectively.
At equal charge stoichiometry, fpol+ = 0.5. In excess of monomer, the intermediate structures
at fpol+ = 0.5 scatter more
light, indicating that different structures are formed. This difference
can be explained from the effect of stoichiometry on the absolute
reaction rate: although the relative reaction rate is lower when the
monomer is present in excess, the absolute reaction rate is still
higher. This can be seen by comparing the increase of the degree of
polymerization of the positive block (Figure e). Especially around fpol+ = 0.5, the polymerization with excess monomer
is faster. This higher absolute rate is the result of the larger overall
monomer concentration.This reveals the important role that
the kinetic pathways play in structure formation: the building blocks
form different structures when the rate at which they approach the
point of equal charge stoichiometry is higher. This is seen by the
fact that the scattering intensity is higher when the rate of polymerization
around fpol+ = 0.5 is increased.
Moreover, direct mixing of presynthesized polymers at fpol+ = 0.5, where equal stoichiometry is achieved
almost instantly, results in very turbid samples (Figure d). This suggests that in this
case kinetically trapped structures are formed when building block
synthesis and assembly are decoupled. Indeed, during C3M formation
larger nonequilibrium clusters are sometimes observed to be formed,
which can either relax to their equilibrium state[33,34] or remain trapped if equilibration is too slow.[33,35] Gradual transition across the energy landscape for coassembly by
coupling synthesis with assembly can avoid the formation of these
trapped structures, without necessitating laborious protocols in which
salt is gradually removed to slowly increase the interaction strength.[36]
Kinetic Model
These data shed light
on the fundamental effects that chemical feedback can have on the
templated coassembly process explored here. To obtain a quantitative
grasp on these effects for a predictive understanding of reaction-assembly
networks, we develop a kinetic reaction network model that captures
the elementary reaction steps and their couplings. Polymerization
can take place both at the template and in solution, with a rate constant kp. At the template, the monomer concentration
is locally increased because of supramolecular binding. The factor
by which the concentration is increased depends on the ratio of the
volume around the template compared to the total volume Vb/Vtot and the monomer fraction
that is bound to the template. This fraction depends on the number
of available free binding sites Sf and on the monomer binding
affinity. The binding affinity is reflected in the ratio between the
binding constant kb and release constant kf of the monomer to the template. The positive
block binds stronger to the template because of multivalency: kd = ω0 exp(−nEa/kBT), where Ea is the binding energy of
a single monomer unit to the template. The diblock binds to the template
with an association rate ka, which is
diffusion-limited. The positive monomers of a bound diblock can temporarily
release from the template and subsequently bind again. As long as
part of the monomers of the bound diblock remain bound, this temporal
release of some of the monomers will not result in the release of
the diblock from the template. The release rate constant of a diblock
monomer is the same as the dissociation constant for a single monomer kf. However, we expect that the binding rate
constant kb is larger
than the binding constant of a single monomer kb because the free monomers of the bound diblock remain close
to the template. The different processes of the kinetic reaction network
model are schematically summarized in Figure b. For visual clarity, the reaction of the
free diblock with the bound monomers, the reaction of the bound diblock
with the free monomers, and the exchange of the bound monomers of
the bound diblock between a template-bound and a free state are not
shown in Figure b.The polymerization rate in our kinetic model has to be corrected
to account for the experimentally observed induction period. For this,
we use the polymerizations without the template at different monomer
concentrations to obtain experimentally derived correction functions c(t) (Figure ). For the polymerization with the template,
we obtain the c(t) from the polymerization
without the template at a monomer concentration of 175 mM. This is
an approximation because the local monomer concentration at the template
is not exactly 175 mM, and the monomer concentration is only
locally increased. However, at larger monomer concentrations, the
effect of the monomer concentration on the induction period is small
compared to monomer independent induction time. Therefore, we expect
that these differences only have a minor effect and the approximation
will work reasonably well. The correction functions c(t) follow from the local slopes of the pseudo-first-order
kinetic plots: for pseudo-first-order polymerization kinetics, this
slope equals kp∑[P–M], where kp is the polymerization rate constant per molar of polymer
∑[P–M]. The factor by which the local slope at time t deviates from this value gives the correction value c(t). We note that for the polymerization of the
inverted system, deviations from pseudo-first-order kinetics do not
happen only at the start of the reaction but also at the end probably
because of radical termination reactions (Figure c,d). Because we expect the termination reactions
to be slightly different for every polymerization reaction, we do
not include these effects in c(t). In order to numerically solve the differential equations of the
kinetic model, we need a better time resolution than we can obtain
from the NMR reaction experiments. Therefore, we approximate the local
slope function by the function y = x(exp(at – tshift))/(1 + exp(at – tshift)) = xc(t), where x should equal x = kp∑[P–M] and a and tshift are empirical constants (Figure b,d).The covalent and supramolecular reactions
together can be described by a set of differential reaction kinetic
equations (Methods). Once the initial concentrations
and model constants are known, this system of differential equations
can be numerically solved to give the concentrations of the different
components as a function of the reaction time. Most rate constants
are obtained from additional experiments or the literature;[26] see Supporting Information Section S10 and Figures S10–S17 for parameterization details. We use only the ratio Vtot/Vb and the binding rate
of the unbound monomers of the bound diblock kb as adjustable parameters to fit the model
to the experimental data. By taking Vtot/Vb = 8 and kb = 500kb, the model prediction
of the monomer conversion agrees well with the experimental data for
the reaction-assembly network with the negatively charged template
(Figures c and 5b). In addition, it also correctly describes the
time point of free monomer fraction increase (Figures b, 2c,d, 5c,f). For the inverted reaction-assembly network,
the model overestimates the reaction rate at longer reaction times
(Figure b) because
we did not include the effect of radical termination in the model c(t) function as explained above. The obtained
value for Vtot/Vb is smaller than that we estimated based on estimations of
the ionic bond length and polyelectrolyte blob size (Figure S9). Possible explanations for this difference are
that the bound monomers might also be further away than the ionic
bond length or that neglecting the prefactors in the estimation resulted
in an overestimation of the Vtot/Vb ratio. In addition, viscosity effects might
have slightly slowed down the polymerization, resulting in a lower
apparent Vtot/Vb ratio in the experiments. The fact that kb has to be much larger than the binding rate constant
of a single monomer kb to accurately describe
the data (Figure S11) demonstrates once
more that local enrichment can significantly increase the rate at
which the process occurs.
Figure 6
Kinetic model predictions and the effect of
the monomer–template interaction strength. (a–e,g) Kinetic
model predictions for (a,e) the time evolution of the monomer concentration,
(b,g) free monomer fraction Mf/Mtot, (c) free
diblock copolymer concentration ∑[P–Mf], and (d) free template sites concentration.
Model predictions are made for the polymerization reaction with different
monomer-to-template ratios (a–d) and for the polymerization
reaction with template at Mtot/Stot = 1:1 with
decreasing monomer binding strengths by decreasing the value of Ea (e,g), which affects both kd and kf. Unless otherwise
indicated, the model parameters are the same as in Figure . (f,h) Experimental effects
of decreasing the monomer binding strength by increasing the ionic
strength (KCl concentration) in the reaction-assembly network on (f)
the monomer conversion and on (h) the T1 of the monomer proton M4.
Kinetic model predictions and the effect of
the monomer–template interaction strength. (a–e,g) Kinetic
model predictions for (a,e) the time evolution of the monomer concentration,
(b,g) free monomer fraction Mf/Mtot, (c) free
diblock copolymer concentration ∑[P–Mf], and (d) free template sites concentration.
Model predictions are made for the polymerization reaction with different
monomer-to-template ratios (a–d) and for the polymerization
reaction with template at Mtot/Stot = 1:1 with
decreasing monomer binding strengths by decreasing the value of Ea (e,g), which affects both kd and kf. Unless otherwise
indicated, the model parameters are the same as in Figure . (f,h) Experimental effects
of decreasing the monomer binding strength by increasing the ionic
strength (KCl concentration) in the reaction-assembly network on (f)
the monomer conversion and on (h) the T1 of the monomer proton M4.The free diblock copolymer concentration decreases before we observe
the increase in the fraction of free monomers (Figure c). Only when the average degree of polymerization
increases sufficiently such that the binding affinity of the diblock
becomes larger, the bound monomer fraction decreases. The increased
binding affinity of the diblock results in a decrease in free template
sites Sf (Figure d). This decrease in Sf shifts the monomer-to-template
binding equilibrium more toward the free monomers. The binding of
the diblock to the template is reflected by the broadening of the
template proton peaks in the 1H NMR spectra (Figures b, S8).Within our model, the template plays an essential role by
acting as staging area for the chemical reaction. By decreasing the
monomer–template interactions, the template effect can be reduced:
decreasing the binding energy Ea of a
monomer to the template results in less monomer binding and as a result
the reaction rate is decreased (Figure e,g). In fact, for the lowest binding energies, the
decrease might even be larger than shown here because the induction
period and thus c(t) are also affected
when the monomer concentration largely decreases (Figures and S12). A way to decrease the interaction strength experimentally is to
increase the ionic strength in the solution. A higher ionic strength
indeed lowers the monomer binding and the reaction rate (Figures f,h and S18). In addition, the induction period seems
to lengthen at higher ionic strength, which could indicate that the
decrease in local monomer concentration is large enough to affect
the induction period. These effects of changing the interaction strength
demonstrate that the reaction rate of the templated reaction-assembly
network can be tuned, which is essential to regulate the assembly
and in some cases can regulate the final structures formed, as discussed
above.
Conclusions
The rational design
of synthetic reaction-assembly strategies requires a deep understanding
of the chemical feedback between the covalent reaction and the supramolecular
assembly. Here, we have unraveled the kinetic pathways of templated
reaction-assembly networks and we have shown that chemical feedback
fundamentally changes both processes. Supramolecular staging of the
monomers on the template strongly accelerates the polymerization reaction.
The rate at which the reaction reaches the point of self-assembly
in turn affects the structures that are formed.One of the challenges
in the design of self- or coassembling systems is to ensure that they
arrive at their equilibrium state and do not become trapped in a local
energetic minimum. Our results highlight how the rational design of
a reaction-assembly network can achieve exactly this also at relatively
high concentrations, where kinetic trapping is often inevitable in
conventional assembly processes.[37] These
results can be easily extended to other PIESA and PISA systems, where
kinetic trapping is avoided or in some cases promoted to arrive at
new nanostructures.[14,16,17] Also, in these other reaction-assembly networks, spectrally resolved
NMR relaxometry can be applied to probe the local dynamics of the
separate components. Simultaneously, our kinetic model can serve as
a framework to describe also these other systems after implementing
some adaptations, for example, including viscosity effects or replacing
local enrichment at the template by local enrichment within assembled
structures. It would be interesting to complement these future measurements
by time-resolved SAXS measurements as the interpretation of SAXS measurements
at the relatively high concentrations of the reaction-assembly networks
is less ambiguous than for conventional light-scattering experiments.
By using this combination of NMR experiments, scattering experiments,
and kinetic modeling, the assembly of a wide variety of nanostructures
can be linked to the corresponding reaction kinetics, facilitating
the rational design of new synthetic supramolecular materials.
Methods
Sample Preparation
A comprehensive overview of synthetic methods is provided in the Supporting Information (Section S1). For the
reaction-assembly experiment at Mtot/Stot =
1:1, the positive monomer vinylbenzyltrimethylammonium chloride (VBTAC,
35 mM), the macroRAFT chain-transfer agent poly(ethylene glycol methyl)ether
4-cyano-4-(propylsulfanylthiocarbonyl)-sulfanylpentanoate (PEG-CTA,
0.7 mM), the radical initiator 2,2′-azobis[2-(2-imidazolin-2-yl)propane]
dihydrochloride (VA-044, 0.14 mM), the template poly(sulfopropylmethacrylate)
(PSPMA, 35 mM of SPMA units), and potassium chloride (KCl) (10 mM)
were dissolved in 5 mL of D2O. The solution was degassed
with N2 for 30 min. Simultaneously, a glass tube for light-scattering
experiments and a NMR tube both sealed with a rubber septum were also
degassed for 30 min. Subsequently, circa ∼0.8 mL was transferred
to the NMR tube and ∼3.5 mL was transferred to the glass tube.For the polymerization at a Mtot/Stot = 3:1
ratio, the monomer concentration was 105 mM instead of 35 mM, for
the polymerizations without the template, no PSPMA was added, and
for the polymerization at larger ionic strength, 120 mM KCl was added
instead of 10 mM.The sample preparation protocol for the inverted
reaction-assembly network was similar to the sample preparation protocol
for the normal reaction-assembly network with [VBTAC] = 35 mM. Only
this time, the negatively charged PSPMA template was replaced by the
positively charged poly((vinylbenzyl)trimethylammoniumchloride) (PVBTA)
template and the positively charged VBTAC monomer was replaced by
the negatively charged 3-sulfoproyl methacrylate potassium (KSPMA)
monomer. In addition, the PEG chain-transfer agent was replaced by
another PEG chain-transfer agent, poly(ethylene glycol)4-cyano-4-phenylcarbonothioylthio
pentanoate. For the polymerizations without the template, no PVBTA
was added.
Light-Scattering Measurements
Light-scattering
measurements were performed at 44 °C on ALV light-scattering
apparatus equipped with an ALV/LSE-5004 light scattering electronic
and multiple tau digital correlator and a HeNe-laser operating at
632.8 nm. The scattering angle was set at 90°. The scattered
intensities were obtained by averaging the photon count rate over
periods of 60 s. The apparent hydrodynamic radius was obtained from
second-order cumulant analysis of the intensity autocorrelation function
(Figure S4).
NMR Measurements
1H NMR reaction experiments were performed at 44 °C
on a Bruker 700 MHz AVANCE NMR equipped with a BBI probe. During the
reaction, a set of four different NMR measurements was continuously
repeated, consisting of (i) single-pulse spectral acquisition; (ii)
single-pulse spectral acquisition with a T2-filter based on PROJECT pulse sequence[38] (short filter of 20 ms, Section S3.1 and Figure S2); (iii) same as in (ii) but with long T2-filter of 2.4 s (Section S3.2); (iv) inversion recovery measurement with a PROJECT-based acquisition
scheme (Section S3.3 and Figure S2). Here,
measurements (ii), (iii), and (iv) were used, respectively, to quantify
the monomer conversion, to observe indirect effects of T2 on signal intensity, and to determine T1 relaxation rates. The length of the 90° rf pulse
was readjusted at the start of every reaction and was subsequently
kept constant within the reaction study. A 14 kHz spectral width was
used. In each experiment, the signal from two consecutive acquisitions
was added to obtain a sufficient signal-to-noise ratio. The receiver
dead time was set to 6.5 μs. The longest T1 was about 3–4 s during most of the reaction, thus
the recycle delay was set to 21 s (∼5T1) to obtain quantitative results while achieving the desired
time resolution. Only at the end of the reactions with template at
Mtot/Stot = 3:1 and during the reactions without
template, the T1 of one M peaks (M2) exceeded 4.2 s (Figure S2); thus,
this particular result is not fully quantitative. Yet, this does not
affect the data interpretation presented here. The M5 proton
peak partly overlaps with the solvent peak and the A3,
A4, and A6 proton peaks (partly) overlap with
the template proton peaks. Therefore, these protons are not included
in the analysis of T1 and of the T2-filtered intensity. After the reaction, the
measured free induction decays were Fourier transformed, phased, baseline
corrected, and integrated by using the Bruker NMR software TopSpin
4.0.7. Single-exponential data fitting of T1 recovery curves was performed by using a constrained nonlinear least-squares
fit algorithm as implemented in the Python package SciPy.The kinetic model describes the changes in the concentration of
the different components with a set of differential equations. Here,
we give a brief overview of these equations. More details are given
in the Supporting Information (Section
S10).The change in free monomer concentration is given bywhere the first two terms
indicate the change of free monomer concentration because of the exchange
of the monomer between the free and the bound state and the last term
indicates the change due to the polymerization reaction. In a similar
way we get for the bound monomerhere, the factor Vtot/Vb accounts for the fact that the monomer concentration
at the template is locally increased.The change in concentration
of a free diblock with a degree of polymerization of the positive
block n is given byalso here, the first two terms correspond to exchange between the
free and the bound state and the last term corresponds to the polymerization
reaction.The change in the concentration of a bound diblock
with the degree of polymerization of the positive block n follows fromThe neutral block P–M0 cannot bind to the
template and therefore always remains in the free state. Its concentration
decreases due to the polymerization reactionWhen a diblock with n positive monomers is bound to the template, part of the monomers
can also temporarily unbind from the template and rebind again. The
positive monomers of bound diblocks can thus exchange between a free
and a bound state. We indicate the concentration of bound positive
monomers of bound diblocks with [nb] and
the concentration of free positive monomers of bound diblocks with
[nf]. The concentration of bound positive
monomers of bound diblocks [nb] changes
according towhere z = [nb]/([nb] + [nf]) is the
fraction of bound monomers of the positive block. The first two terms
correspond to the exchange between the free and bound state. The third
and fourth terms indicate the changes in [nb] because of binding and release of the diblock, respectively, and
the last term indicates the increase in [nb] when a bound diblock reacts with a free monomer.The change
in the concentration of free positive monomers of bound diblocks [nf] is given byFinally,
the change of the free template site concentration is given bywhere the first two terms correspond to the binding and release of
a single monomer, the third and fourth terms correspond to the binding
and release of a diblock, the fifth and sixth terms correspond to
the binding and release of the monomers of the bound diblocks, and
the last term accounts for changes in [Sf] because of the
reactions of a bound monomer with a free diblock or a free monomer
with a bound diblock.We have used the Runge–Kutta fourth-order
method to numerically solve this system of differential equations
for different sets of model parameters (Figures S10–S17).
Authors: Makoto Kinoshita; Christine M Field; Margaret L Coughlin; Aaron F Straight; Timothy J Mitchison Journal: Dev Cell Date: 2002-12 Impact factor: 12.270
Authors: Michael Lueckheide; Jeffrey R Vieregg; Alex J Bologna; Lorraine Leon; Matthew V Tirrell Journal: Nano Lett Date: 2018-10-22 Impact factor: 11.189