Literature DB >> 33327995

[Application value of whole exome sequencing in critically ill neonates with inherited diseases].

Yu-Lan Chen1, You-Xiang Zhang1, Xiu-Fang Yang, Jian Chen, Xiao-Tong Li, Mu-Hua Huang, Jing-Wei Ruan, Qiang Lin.   

Abstract

OBJECTIVE: To study the application value of whole exome sequencing (WES) in critically ill neonates with inherited diseases.
METHODS: A total of 66 critically ill neonates with suspected inherited diseases or unclear clinical diagnosis who were admitted to the neonatal intensive care unit were enrolled as subjects. The clinical data of the neonates were collected, and venous blood samples were collected from the neonates and their parents for WES. The clinical manifestations of the neonates were observed to search for related pathogenic gene mutations.
RESULTS: Among the 66 critically ill neonates with suspected inherited diseases or unclear clinical diagnosis (34 boys and 32 girls), 14 (21%) were found to have gene mutations by WES. One neonate had no gene mutation detected by WES but was highly suspected of pigment incontinence based on clinical manifestations, and multiplex ligation-dependent probe amplification detected a heterozygous deletion mutation in exons 4-10 of the IKBKG gene. Among the 15 neonates with gene mutations, 10 (67%) had pathogenic gene mutation, 1 (7%) was suspected of pathogenic gene mutation, and 4 (27%) had gene mutations with unknown significance. Among the 15 neonates, 13 underwent chromosome examination, and only 1 neonate was found to have chromosome abnormality.
CONCLUSIONS: Chromosome examination cannot be used as a diagnostic method for inherited diseases, and WES detection technology is an important tool to find inherited diseases in critically ill neonates with suspected inherited diseases or unclear clinical diagnosis; however WES technology has some limitation and it is thus necessary to combine with other sequencing methods to achieve an early diagnosis.

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Year:  2020        PMID: 33327995      PMCID: PMC7735930     

Source DB:  PubMed          Journal:  Zhongguo Dang Dai Er Ke Za Zhi        ISSN: 1008-8830


  10 in total

1.  Comprehensive one-step molecular analyses of mitochondrial genome by massively parallel sequencing.

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Authors:  Yanming Feng; Xiaoyan Ge; Linyan Meng; Jennifer Scull; Jianli Li; Xia Tian; Tao Zhang; Weihong Jin; Hanyin Cheng; Xia Wang; Mari Tokita; Pengfei Liu; Hui Mei; Yue Wang; Fangyuan Li; Eric S Schmitt; Wei V Zhang; Donna Muzny; Shu Wen; Zhao Chen; Yaping Yang; Arthur L Beaudet; Xiaoming Liu; Christine M Eng; Fan Xia; Lee-Jun Wong; Jinglan Zhang
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10.  Improved diagnostics by exome sequencing following raw data reevaluation by clinical geneticists involved in the medical care of the individuals tested.

Authors:  Lina Basel-Salmon; Naama Orenstein; Keren Markus-Bustani; Noa Ruhrman-Shahar; Yael Kilim; Nurit Magal; Monika Weisz Hubshman; Lily Bazak
Journal:  Genet Med       Date:  2018-10-31       Impact factor: 8.822

  10 in total

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