Literature DB >> 33322460

Size Matters: An Evaluation of the Molecular Basis of Ontogenetic Modifications in the Composition of Bothrops jararacussu Snake Venom.

Luciana A Freitas-de-Sousa1, Pedro G Nachtigall2, José A Portes-Junior3, Matthew L Holding4, Gunnar S Nystrom4, Schyler A Ellsworth4, Noranathan C Guimarães1, Emilly Tioyama1, Flora Ortiz3, Bruno R Silva3, Tobias S Kunz3, Inácio L M Junqueira-de-Azevedo2, Felipe G Grazziotin3, Darin R Rokyta4, Ana M Moura-da-Silva1,5.   

Abstract

Ontogenetic changes in venom composition have been described in Bothrops snakes, but only a few studies have attempted to identify the targeted paralogues or the molecular mechanisms involved in modifications of gene expression during ontogeny. In this study, we decoded B. jararacussu venom gland transcripts from six specimens of varying sizes and analyzed the variability in the composition of independent venom proteomes from 19 individuals. We identified 125 distinct putative toxin transcripts, and of these, 73 were detected in venom proteomes and only 10 were involved in the ontogenetic changes. Ontogenetic variability was linearly related to snake size and did not correspond to the maturation of the reproductive stage. Changes in the transcriptome were highly predictive of changes in the venom proteome. The basic myotoxic phospholipases A2 (PLA2s) were the most abundant components in larger snakes, while in venoms from smaller snakes, PIII-class SVMPs were the major components. The snake venom metalloproteinases (SVMPs) identified corresponded to novel sequences and conferred higher pro-coagulant and hemorrhagic functions to the venom of small snakes. The mechanisms modulating venom variability are predominantly related to transcriptional events and may consist of an advantage of higher hematotoxicity and more efficient predatory function in the venom from small snakes.

Entities:  

Keywords:  Bothrops jararacussu; metalloproteinases; ontogenetic variability; phospholipases A2; proteome; transcriptome

Mesh:

Substances:

Year:  2020        PMID: 33322460      PMCID: PMC7763748          DOI: 10.3390/toxins12120791

Source DB:  PubMed          Journal:  Toxins (Basel)        ISSN: 2072-6651            Impact factor:   4.546


  87 in total

1.  MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Authors:  Kazutaka Katoh; Kazuharu Misawa; Kei-ichi Kuma; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

Review 2.  Insights into and speculations about snake venom metalloproteinase (SVMP) synthesis, folding and disulfide bond formation and their contribution to venom complexity.

Authors:  Jay W Fox; Solange M T Serrano
Journal:  FEBS J       Date:  2008-05-08       Impact factor: 5.542

3.  Studies on blood coagulation and fibrinolysis in patients bitten by Bothrops jararaca (jararaca).

Authors:  M Maruyama; A S Kamiguti; J L Cardoso; I S Sano-Martins; A M Chudzinski; M L Santoro; P Morena; S C Tomy; L C Antonio; H Mihara
Journal:  Thromb Haemost       Date:  1990-06-28       Impact factor: 5.249

4.  CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts.

Authors:  Pedro G Nachtigall; Andre Y Kashiwabara; Alan M Durham
Journal:  Brief Bioinform       Date:  2021-05-20       Impact factor: 11.622

5.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.

Authors:  Bo Li; Colin N Dewey
Journal:  BMC Bioinformatics       Date:  2011-08-04       Impact factor: 3.307

6.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

7.  RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes.

Authors:  James J McGivern; Kenneth P Wray; Mark J Margres; Michelle E Couch; Stephen P Mackessy; Darin R Rokyta
Journal:  BMC Genomics       Date:  2014-12-03       Impact factor: 3.969

8.  CD-HIT: accelerated for clustering the next-generation sequencing data.

Authors:  Limin Fu; Beifang Niu; Zhengwei Zhu; Sitao Wu; Weizhong Li
Journal:  Bioinformatics       Date:  2012-10-11       Impact factor: 6.937

9.  The genesis of an exceptionally lethal venom in the timber rattlesnake (Crotalus horridus) revealed through comparative venom-gland transcriptomics.

Authors:  Darin R Rokyta; Kenneth P Wray; Mark J Margres
Journal:  BMC Genomics       Date:  2013-06-12       Impact factor: 3.969

10.  Comparative venom-gland transcriptomics and venom proteomics of four Sidewinder Rattlesnake (Crotalus cerastes) lineages reveal little differential expression despite individual variation.

Authors:  Erich P Hofmann; Rhett M Rautsaw; Jason L Strickland; Matthew L Holding; Michael P Hogan; Andrew J Mason; Darin R Rokyta; Christopher L Parkinson
Journal:  Sci Rep       Date:  2018-10-19       Impact factor: 4.379

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  3 in total

1.  Individual Variability in Bothropsatrox Snakes Collected from Different Habitats in the Brazilian Amazon: New Findings on Venom Composition and Functionality.

Authors:  Leijane F Sousa; Matthew L Holding; Tiago H M Del-Rei; Marisa M T Rocha; Rosa H V Mourão; Hipócrates M Chalkidis; Benedito Prezoto; H Lisle Gibbs; Ana M Moura-da-Silva
Journal:  Toxins (Basel)       Date:  2021-11-18       Impact factor: 4.546

2.  Differences in PLA2 Constitution Distinguish the Venom of Two Endemic Brazilian Mountain Lanceheads, Bothrops cotiara and Bothrops fonsecai.

Authors:  Pedro G Nachtigall; Luciana A Freitas-de-Sousa; Andrew J Mason; Ana M Moura-da-Silva; Felipe G Grazziotin; Inácio L M Junqueira-de-Azevedo
Journal:  Toxins (Basel)       Date:  2022-03-25       Impact factor: 5.075

3.  Diversity of Phospholipases A2 from Bothrops atrox Snake Venom: Adaptive Advantages for Snakes Compromising Treatments for Snakebite Patients.

Authors:  Leijiane F Sousa; Amanda P Freitas; Bruna L Cardoso; Tiago H M Del-Rei; Vanessa A Mendes; Daniele P Oréfice; Marisa M T Rocha; Benedito C Prezoto; Ana M Moura-da-Silva
Journal:  Toxins (Basel)       Date:  2022-08-08       Impact factor: 5.075

  3 in total

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