Literature DB >> 33322118

Genomic Analysis of CTX-M-Group-1-Producing Extraintestinal Pathogenic E. coli (ExPEc) from Patients with Urinary Tract Infections (UTI) from Colombia.

Elsa De La Cadena1, María Fernanda Mojica1,2,3, Nathaly Castillo1, Adriana Correa4,5, Tobias Manuel Appel1, Juan Carlos García-Betancur1, Christian José Pallares1,6, María Virginia Villegas1,6.   

Abstract

BACKGROUND: The dissemination of the uropathogenic O25b-ST131 Escherichia coli clone constitutes a threat to public health. We aimed to determine the circulation of E. coli strains belonging to O25b:H4-B2-ST131 and the H30-Rx epidemic subclone causing hospital and community-acquired urinary tract infections (UTI) in Colombia.
METHODS: Twenty-six nonduplicate, CTX-M group-1-producing isolates causing UTI in the hospital and community were selected for this study.
RESULTS: Twenty-two E. coli isolates harboring CTX-M-15, one CTX-M-3, and three CTX-M-55 were identified. Multilocus Sequence Typing (MLST) showed a variety of sequence types (STs), among which, ST131, ST405, and ST648 were reported as epidemic clones. All the E. coli ST131 sequences carried CTX-M-15, from which 80% belonged to the O25b:H4-B2 and H30-Rx pandemic subclones and were associated with virulence factors iss, iha, and sat. E. coli isolates (23/26) were resistant to ciprofloxacin and associated with amino acid substitutions in quinolone resistance-determining regions (QRDR). We detected two carbapenem-resistant E. coli isolates, one coproducing CTX-M-15, KPC-2, and NDM-1 while the other presented mutations in ompC. Additionally, one isolate harbored the gene mcr-1.
CONCLUSIONS: Our study revealed the circulation of the E. coli ST131, O25b:H4-B2-H30-Rx subclone, harboring CTX-M-15, QRDR mutations, and other resistant genes. The association of the H30-Rx subclone with sepsis and rapid dissemination warrants attention from the public health and infections control.

Entities:  

Keywords:  CTX-M; E. coli ST131; H30-RX subclone; O25b:H4; clonal dissemination; urinary tract infections (UTI)

Year:  2020        PMID: 33322118      PMCID: PMC7763464          DOI: 10.3390/antibiotics9120899

Source DB:  PubMed          Journal:  Antibiotics (Basel)        ISSN: 2079-6382


  25 in total

1.  Virulence of Escherichia coli clinical isolates in a murine sepsis model in relation to sequence type ST131 status, fluoroquinolone resistance, and virulence genotype.

Authors:  James R Johnson; Stephen B Porter; George Zhanel; Michael A Kuskowski; Erick Denamur
Journal:  Infect Immun       Date:  2012-02-06       Impact factor: 3.441

Review 2.  Escherichia coli ST131, an intriguing clonal group.

Authors:  Marie-Hélène Nicolas-Chanoine; Xavier Bertrand; Jean-Yves Madec
Journal:  Clin Microbiol Rev       Date:  2014-07       Impact factor: 26.132

Review 3.  Double- and multi-carbapenemase-producers: the excessively armored bacilli of the current decade.

Authors:  G Meletis; D Chatzidimitriou; N Malisiovas
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-04-18       Impact factor: 3.267

Review 4.  Extended-spectrum beta-lactamases: a clinical update.

Authors:  David L Paterson; Robert A Bonomo
Journal:  Clin Microbiol Rev       Date:  2005-10       Impact factor: 26.132

5.  Evolution of the iss gene in Escherichia coli.

Authors:  Timothy J Johnson; Yvonne M Wannemuehler; Lisa K Nolan
Journal:  Appl Environ Microbiol       Date:  2008-02-15       Impact factor: 4.792

6.  Molecular epidemiology of Escherichia coli sequence type 131 and Its H30 and H30-Rx subclones among extended-spectrum-β-lactamase-positive and -negative E. coli clinical isolates from the Chicago Region, 2007 to 2010.

Authors:  Ritu Banerjee; Ari Robicsek; Michael A Kuskowski; Stephen Porter; Brian D Johnston; Evgeni Sokurenko; Veronika Tchesnokova; Lance B Price; James R Johnson
Journal:  Antimicrob Agents Chemother       Date:  2013-09-30       Impact factor: 5.191

Review 7.  Escherichia coli ST131: a multidrug-resistant clone primed for global domination.

Authors:  Johann D D Pitout; Rebekah DeVinney
Journal:  F1000Res       Date:  2017-02-28

8.  Beta-lactamase database (BLDB) - structure and function.

Authors:  Thierry Naas; Saoussen Oueslati; Rémy A Bonnin; Maria Laura Dabos; Agustin Zavala; Laurent Dortet; Pascal Retailleau; Bogdan I Iorga
Journal:  J Enzyme Inhib Med Chem       Date:  2017-12       Impact factor: 5.051

9.  The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx.

Authors:  Lance B Price; James R Johnson; Maliha Aziz; Connie Clabots; Brian Johnston; Veronika Tchesnokova; Lora Nordstrom; Maria Billig; Sujay Chattopadhyay; Marc Stegger; Paal S Andersen; Talima Pearson; Kim Riddell; Peggy Rogers; Delia Scholes; Barbara Kahl; Paul Keim; Evgeni V Sokurenko
Journal:  mBio       Date:  2013-12-17       Impact factor: 7.867

10.  Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131.

Authors:  Nicole Stoesser; Anna E Sheppard; Louise Pankhurst; Nicola De Maio; Catrin E Moore; Robert Sebra; Paul Turner; Luke W Anson; Andrew Kasarskis; Elizabeth M Batty; Veronica Kos; Daniel J Wilson; Rattanaphone Phetsouvanh; David Wyllie; Evgeni Sokurenko; Amee R Manges; Timothy J Johnson; Lance B Price; Timothy E A Peto; James R Johnson; Xavier Didelot; A Sarah Walker; Derrick W Crook
Journal:  mBio       Date:  2016-03-22       Impact factor: 7.867

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  1 in total

1.  An Update on Wastewater Multi-Resistant Bacteria: Identification of Clinical Pathogens Such as Escherichia coli O25b:H4-B2-ST131-Producing CTX-M-15 ESBL and KPC-3 Carbapenemase-Producing Klebsiella oxytoca.

Authors:  Elsa Mesquita; Rita Ribeiro; Carla J C Silva; Rita Alves; Rita Baptista; Sílvia Condinho; Maria João Rosa; João Perdigão; Cátia Caneiras; Aida Duarte
Journal:  Microorganisms       Date:  2021-03-11
  1 in total

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