Literature DB >> 33320382

Steeper spatial scaling patterns of subsoil microbiota are shaped by deterministic assembly process.

Xiongfeng Du1,2, Ye Deng1,2,3, Shuzhen Li1,4, Arthur Escalas5, Kai Feng1,2, Qing He1,2, Zhujun Wang1,2, Yueni Wu1,2, Danrui Wang1,2, Xi Peng1,2, Shang Wang1.   

Abstract

Although many studies have investigated the spatial scaling of microbial communities living in surface soils, very little is known about the patterns within deeper strata, nor is the mechanism behind them. Here, we systematically assessed spatial scaling of prokaryotic biodiversity within three different strata (Upper: 0-20 cm, Middle: 20-40 cm, and Substratum: 40-100 cm) in a typical grassland by examining both distance-decay (DDRs) and species-area relationships (SARs), taxonomically and phylogenetically, as well as community assembly processes. Each layer exhibited significant biogeographic patterns in both DDR and SAR (p < .05), with taxonomic turnover rates higher than phylogenetic ones. Specifically, the spatial turnover rates, β and z values, respectively, ranged from 0.016 ± 0.005 to 0.023 ± 0.005 and 0.065 ± 0.002 to 0.077 ± 0.004 across soil strata, and both increased with depth. Moreover, the prokaryotic community in grassland soils assembled mainly according to deterministic rather than stochastic mechanisms. By using normalized stochasticity ratio (NST) based on null model, the relative importance of deterministic ratios increased from 48.0 to 63.3% from Upper to Substratum, meanwhile a phylogenetic based method revealed average βNTI also increased with depth, from -5.29 to 19.5. Using variation partitioning and distance approaches, both geographic distance and soil properties were found to strongly affect biodiversity structure, the proportions increasing with depth, but spatial distance was always the main underlying factor. These indicated increasingly deterministic proportions in accelerating turnover rates for spatial assembly of prokaryotic biodiversity. Our study provided new insights on biogeography in different strata, revealing importance of assembly patterns and mechanisms of prokaryote communities in below-surface soils.
© 2020 John Wiley & Sons Ltd.

Entities:  

Keywords:  assembly mechanism; biodiversity; biogeography; grassland; prokaryote; spatial scaling

Mesh:

Substances:

Year:  2020        PMID: 33320382     DOI: 10.1111/mec.15777

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  4 in total

1.  Homogeneous Selection and Dispersal Limitation Dominate the Effect of Soil Strata Under Warming Condition.

Authors:  Zhujun Wang; Kai Feng; Guangxin Lu; Hao Yu; Shang Wang; Ziyan Wei; Ning Dang; Yingcheng Wang; Ye Deng
Journal:  Front Microbiol       Date:  2022-02-24       Impact factor: 5.640

2.  The divergent vertical pattern and assembly of soil bacterial and fungal communities in response to short-term warming in an alpine peatland.

Authors:  Xiaodong Wang; Yong Li; Zhongqing Yan; Yanbin Hao; Enze Kang; Xiaodong Zhang; Meng Li; Kerou Zhang; Liang Yan; Ao Yang; Yuechuan Niu; Xiaoming Kang
Journal:  Front Plant Sci       Date:  2022-09-08       Impact factor: 6.627

3.  Soil microbial community assembly and stability are associated with potato (Solanum tuberosum L.) fitness under continuous cropping regime.

Authors:  Songsong Gu; Xingyao Xiong; Lin Tan; Ye Deng; Xiongfeng Du; Xingxing Yang; Qiulong Hu
Journal:  Front Plant Sci       Date:  2022-10-03       Impact factor: 6.627

4.  Soil Layers Impact Lithocarpus Soil Microbial Composition in the Ailao Mountains Subtropical Forest, Yunnan, China.

Authors:  Sijia Liu; Jiadong Wu; Haofei Wang; Anna Lukianova; Anna Tokmakova; Zhelun Jin; Shuxian Tan; Sisi Chen; Yue Wang; Yuxin Du; Konstantin A Miroshnikov; Jianbo Xie
Journal:  J Fungi (Basel)       Date:  2022-09-09
  4 in total

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