Literature DB >> 33317090

Structural Diversity and Highly Specific Host-Pathogen Transcriptional Regulation of Defensin Genes Is Revealed in Tomato.

Nikolaos Nikoloudakis1, Polyxeni Pappi2, Emmanouil A Markakis2, Spyridoula N Charova3,4, Dimitrios Fanourakis5,6, Konstantinos Paschalidis6, Costas Delis7, Emmanuel A Tzortzakakis2, Georgios Tsaniklidis2.   

Abstract

Defensins are small and rather ubiquitous cysteine-rich anti-microbial peptides. These proteins may act against pathogenic microorganisms either directly (by binding and disrupting membranes) or indirectly (as signaling molecules that participate in the organization of the cellular defense). Even though defensins are widespread across eukaryotes, still, extensive nucleotide and amino acid dissimilarities hamper the elucidation of their response to stimuli and mode of function. In the current study, we screened the Solanum lycopersicum genome for the identification of defensin genes, predicted the relating protein structures, and further studied their transcriptional responses to biotic (Verticillium dahliae, Meloidogyne javanica, Cucumber Mosaic Virus, and Potato Virus Y infections) and abiotic (cold stress) stimuli. Tomato defensin sequences were classified into two groups (C8 and C12). Our data indicate that the transcription of defensin coding genes primarily depends on the specific pathogen recognition patterns of V. dahliae and M. javanica. The immunodetection of plant defensin 1 protein was achieved only in the roots of plants inoculated with V. dahliae. In contrast, the almost null effects of viral infections and cold stress, and the failure to substantially induce the gene transcription suggest that these factors are probably not primarily targeted by the tomato defensin network.

Entities:  

Keywords:  CMV; Meloidogyne javanica; PVY; Verticillium wilt; biotic stress; cold stress; defensins; nematodes; tomato

Mesh:

Substances:

Year:  2020        PMID: 33317090      PMCID: PMC7764197          DOI: 10.3390/ijms21249380

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  62 in total

1.  Snakin-2, an antimicrobial peptide from potato whose gene is locally induced by wounding and responds to pathogen infection.

Authors:  Marta Berrocal-Lobo; Ana Segura; Manuel Moreno; Gemma López; Francisco García-Olmedo; Antonio Molina
Journal:  Plant Physiol       Date:  2002-03       Impact factor: 8.340

Review 2.  Plant defensins: defense, development and application.

Authors:  Henrik U Stotz; James G Thomson; Yueju Wang
Journal:  Plant Signal Behav       Date:  2009-11-07

3.  Plant Defensin type 1 (PDF1): protein promiscuity and expression variation within the Arabidopsis genus shed light on zinc tolerance acquisition in Arabidopsis halleri.

Authors:  Zaigham Shahzad; Vincent Ranwez; Cécile Fizames; Laurence Marquès; Bénédicte Le Martret; Julien Alassimone; Cécile Godé; Eric Lacombe; Teddy Castillo; Pierre Saumitou-Laprade; Pierre Berthomieu; Françoise Gosti
Journal:  New Phytol       Date:  2013-07-19       Impact factor: 10.151

Review 4.  Plant defensins.

Authors:  Bart P H J Thomma; Bruno P A Cammue; Karin Thevissen
Journal:  Planta       Date:  2002-10-08       Impact factor: 4.116

5.  Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens.

Authors:  Thomas Boller; Sheng Yang He
Journal:  Science       Date:  2009-05-08       Impact factor: 47.728

6.  The Defensins Consist of Two Independent, Convergent Protein Superfamilies.

Authors:  Thomas M A Shafee; Fung T Lay; Mark D Hulett; Marilyn A Anderson
Journal:  Mol Biol Evol       Date:  2016-06-13       Impact factor: 16.240

7.  The promoter of a plant defensin gene directs specific expression in nematode-induced syncytia in Arabidopsis roots.

Authors:  Shahid Siddique; Krzysztof Wieczorek; Dagmar Szakasits; David P Kreil; Holger Bohlmann
Journal:  Plant Physiol Biochem       Date:  2011-07-20       Impact factor: 4.270

8.  Phylogeny.fr: robust phylogenetic analysis for the non-specialist.

Authors:  A Dereeper; V Guignon; G Blanc; S Audic; S Buffet; F Chevenet; J-F Dufayard; S Guindon; V Lefort; M Lescot; J-M Claverie; O Gascuel
Journal:  Nucleic Acids Res       Date:  2008-04-19       Impact factor: 16.971

Review 9.  Parasitic Nematode Immunomodulatory Strategies: Recent Advances and Perspectives.

Authors:  Dustin Cooper; Ioannis Eleftherianos
Journal:  Pathogens       Date:  2016-09-14

Review 10.  Defensins of Grasses: A Systematic Review.

Authors:  Tatyana I Odintsova; Marina P Slezina; Ekaterina A Istomina
Journal:  Biomolecules       Date:  2020-07-10
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