Literature DB >> 33317063

DetR DB: A Database of Ionizing Radiation Resistance Determinants.

Alina Ryabova1, Olga Kozlova1, Azat Kadirov1, Anastasiia Ananeva1, Oleg Gusev1,2, Elena Shagimardanova1.   

Abstract

Nuclear pollution is an urgent environmental issue and is a consequence of rapid industrialization and nuclear accidents in the past. Remediation of nuclear polluted sites using microbial vital activity (bioremediation) is a promising approach to recover contaminated areas in an environmentally friendly and cost-saving way. At the same time, the number of known bacterial and archaeal species able to withstand extremely high doses of ionizing radiation (IR) is steadily growing every year, together with growing knowledge about mechanisms of radioresistance that opens up opportunities for developing new biotechnological solutions. However, these data are often not systemized, and can be difficult to access. Here, we present the Determinants of Radioresistance Database, or DetR DB, gathering a comprehensive catalog of radioresistant microbes and their molecular and genetic determinants of enhanced IR tolerance. The database provides search tools, including taxonomy, common gene name, and BLAST. DetR DB will be a useful tool for the research community by facilitating the extraction of the necessary information to help further analysis of radiation-resistant mechanisms.

Entities:  

Keywords:  genetic mechanisms; ionizing radiation; microorganisms; radiation resistance

Year:  2020        PMID: 33317063      PMCID: PMC7764150          DOI: 10.3390/genes11121477

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  19 in total

Review 1.  Developments in terrestrial bacterial remediation of metals.

Authors:  J R Stephen; S J Macnaughton
Journal:  Curr Opin Biotechnol       Date:  1999-06       Impact factor: 9.740

2.  Geomicrobiology of high-level nuclear waste-contaminated vadose sediments at the hanford site, washington state.

Authors:  James K Fredrickson; John M Zachara; David L Balkwill; David Kennedy; Shu-mei W Li; Heather M Kostandarithes; Michael J Daly; Margaret F Romine; Fred J Brockman
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

Review 3.  Effects of ionizing radiation on biological molecules--mechanisms of damage and emerging methods of detection.

Authors:  Julie A Reisz; Nidhi Bansal; Jiang Qian; Weiling Zhao; Cristina M Furdui
Journal:  Antioxid Redox Signal       Date:  2014-02-21       Impact factor: 8.401

4.  COMPARISON OF BACTERIAL FLORA IN RIVER SEDIMENTS FROM FUKUSHIMA AND AOMORI PREFECTURES BY 16S RDNA SEQUENCE ANALYSIS.

Authors:  K Yamanouchi; T Tsujiguchi; Y Shiroma; T Suzuki; Y Tamakuma; M Yamaguchi; Y Sakamoto; M Hegedűs; K Iwaoka; M Hosoda; I Kashiwakura; T Miura; S Tokonami
Journal:  Radiat Prot Dosimetry       Date:  2019-10-01       Impact factor: 0.972

5.  Deinococcus radiodurans engineered for complete toluene degradation facilitates Cr(VI) reduction.

Authors:  Hassan Brim; Jeffrey P Osborne; Heather M Kostandarithes; James K Fredrickson; Lawrence P Wackett; Michael J Daly
Journal:  Microbiology       Date:  2006-08       Impact factor: 2.777

6.  [The effect of gamma-radiation and desiccation on the viability of the soil bacteria isolated from the alienated zone around the Chernobyl Nuclear Power Plant].

Authors:  V A Romanovskaia; P V Rokitko; A N Mikheev; N I Gushcha; Iu R Malashenko; N A Chernaia
Journal:  Mikrobiologiia       Date:  2002 Sep-Oct

7.  [Stress Resistance Mechanisms in the Indicator Fungi from Highly Radioactive Chernobyl Zone Sites].

Authors:  A S Egorova; N N Gessler; L P Ryazanova; T V Kulakovskaya; T A Belozerskaya
Journal:  Mikrobiologiia       Date:  2015 Mar-Apr

8.  Microbiota of spent nuclear fuel pool water with emphasis on their biofilm forming ability on stainless steel (SS-304L).

Authors:  Dugeshwar Karley; Sudhir K Shukla; T Subba Rao
Journal:  J Biosci       Date:  2019-10       Impact factor: 1.826

Review 9.  Reported radiation overexposure accidents worldwide, 1980-2013: a systematic review.

Authors:  Karen Coeytaux; Eric Bey; Doran Christensen; Erik S Glassman; Becky Murdock; Christelle Doucet
Journal:  PLoS One       Date:  2015-03-19       Impact factor: 3.240

10.  Comparative analysis of uranium bioassociation with halophilic bacteria and archaea.

Authors:  Miriam Bader; Katharina Müller; Harald Foerstendorf; Matthias Schmidt; Karen Simmons; Juliet S Swanson; Donald T Reed; Thorsten Stumpf; Andrea Cherkouk
Journal:  PLoS One       Date:  2018-01-12       Impact factor: 3.240

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