Literature DB >> 33316032

Dppa2/4 as a trigger of signaling pathways to promote zygote genome activation by binding to CG-rich region.

Hanshuang Li1, Chunshen Long1, Jinzhu Xiang1, Pengfei Liang1, Xueling Li1, Yongchun Zuo1.   

Abstract

Developmental pluripotency-associated 2 (Dppa2) and developmental pluripotency-associated 4 (Dppa4) as positive drivers were helpful for transcriptional regulation of zygotic genome activation (ZGA). Here, we systematically assessed the cooperative interplay of Dppa2 and Dppa4 in regulating cell pluripotency and found that simultaneous overexpression of Dppa2/4 can make induced pluripotent stem cells closer to embryonic stem cells (ESCs). Compared with other pluripotency transcription factors, Dppa2/4 can regulate majorities of signaling pathways by binding on CG-rich region of proximal promoter (0-500 bp), of which 85% and 77% signaling pathways were significantly activated by Dppa2 and Dppa4, respectively. Notably, Dppa2/4 also can dramatically trigger the decisive signaling pathways for facilitating ZGA, including Hippo, MAPK and TGF-beta signaling pathways and so on. At last, we found alkaline phosphatase, placental-like 2 (Alppl2) was completely silenced when Dppa2 and 4 single- or double-knockout in ESC, which is consistent with Dux. Moreover, Alppl2 was significantly activated in mouse 2-cell embryos and 4-8 cells stage of human embryos, further predicted that Alppl2 was directly regulated by Dppa2/4 as a ZGA candidate driver to facilitate pre-embryonic development.
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Entities:  

Keywords:  zzm321990 Alppl2zzm321990 ; CG-rich region; Dppa2/4; decisive signaling pathways; zygotic genome activation

Year:  2021        PMID: 33316032     DOI: 10.1093/bib/bbaa342

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  4 in total

1.  Arginine Regulates Zygotic Genome Activation in Porcine Embryos Under Nutrition Restriction.

Authors:  Tianrui Zhang; Yingying Zheng; Tianya Kuang; Lianyu Yang; Hailong Jiang; Heming Wang; Yicheng Zhao; Rui Han; Dongsheng Che
Journal:  Front Vet Sci       Date:  2022-06-23

Review 2.  Identify DNA-Binding Proteins Through the Extreme Gradient Boosting Algorithm.

Authors:  Ziye Zhao; Wen Yang; Yixiao Zhai; Yingjian Liang; Yuming Zhao
Journal:  Front Genet       Date:  2022-01-28       Impact factor: 4.599

3.  The Cumulative Formation of R-loop Interacts with Histone Modifications to Shape Cell Reprogramming.

Authors:  Hanshuang Li; Chunshen Long; Yan Hong; Lemuge Chao; Yong Peng; Yongchun Zuo
Journal:  Int J Mol Sci       Date:  2022-01-29       Impact factor: 5.923

Review 4.  DPPA2, DPPA4, and other DPPA factor epigenomic functions in cell fate and cancer.

Authors:  Rachel Herndon Klein; Paul S Knoepfler
Journal:  Stem Cell Reports       Date:  2021-11-11       Impact factor: 7.765

  4 in total

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