Literature DB >> 33312351

A seven immune-related lncRNA signature predicts the survival of patients with colon adenocarcinoma.

Zhilong Li1, Dalu Wang1, Hongzhuan Yin1.   

Abstract

This study aimed to explore immune-related lncRNAs for predicting the overall survival of patients with colon adenocarcinoma. RNA-sequencing data were downloaded from the TCGA data portal. The immune-related lncRNAs with differential expression were identified with Cox and LASSO regression analysis. With the stepwise regression analysis, a seven lncRNA signature was established for calculating the Risk Score with following formula: Risk Score = [Expression level of AC027307.2 * (0.156)] + [Expression level of AC074117.1 * (0.294)] + [Expression level of AC103702.2 * (-0.025)] + [Expression level of CYTOR * (0.205)] + [Expression level of LINC02381 * (0.251)] + [Expression level of MIR200CHG * (0.052)] + [Expression level of SNHG16 * (-0.101)]. The Risk Score was validated with survival analysis, achieving moderate area under the curve (AUC) of receiver operating characteristic (ROC) curve over 0.7. GSEA and immune-cell abundance analysis further supported the involved lncRNAs were immune-relevant. Finally, the prognosis prediction efficacy was verified with clinical samples with an AUC of 0.674 in ROC curve. Both the Risk Score and involved immune-related lncRNAs presented promising clinical significance. AJTR
Copyright © 2020.

Entities:  

Keywords:  LncRNA; colon cancer; immune-related gene; overall survival

Year:  2020        PMID: 33312351      PMCID: PMC7724340     

Source DB:  PubMed          Journal:  Am J Transl Res        ISSN: 1943-8141            Impact factor:   4.060


  8 in total

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Journal:  J Transl Med       Date:  2021-09-22       Impact factor: 5.531

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Journal:  Front Oncol       Date:  2022-02-25       Impact factor: 6.244

7.  Ferroptosis-Related Long Noncoding RNAs as Prognostic Marker for Colon Adenocarcinoma.

Authors:  Yuting Qiu; Haobo Li; Qian Zhang; Xinwei Qiao; Jing Wu
Journal:  Appl Bionics Biomech       Date:  2022-04-08       Impact factor: 1.664

8.  Pan-cancer analysis of prognostic and immunological role of DTYMK in human tumors.

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  8 in total

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