Literature DB >> 33311474

Ubiquitination of RIPK1 regulates its activation mediated by TNFR1 and TLRs signaling in distinct manners.

Xingyan Li1, Mengmeng Zhang1, Xinyue Huang1, Wei Liang1, Ganquan Li1, Xiaojuan Lu1, Yanxia Li1, Heling Pan1, Linyu Shi1, Hong Zhu2, Lihui Qian1, Bing Shan3, Junying Yuan4.   

Abstract

RIPK1 is a death-domain (DD) containing kinase involved in regulating apoptosis, necroptosis and inflammation. RIPK1 activation is known to be regulated by its DD-mediated interaction and ubiquitination, though underlying mechanisms remain incompletely understood. Here we show that K627 in human RIPK1-DD and its equivalent K612 in murine RIPK1-DD is a key ubiquitination site that regulates the overall ubiquitination pattern of RIPK1 and its DD-mediated interactions with other DD-containing proteins. K627R/K612R mutation inhibits the activation of RIPK1 and blocks both apoptosis and necroptosis mediated by TNFR1 signaling. However, Ripk1K612R/K612R mutation sensitizes cells to necroptosis and caspase-1 activation in response to TLRs signaling. Ripk1K612R/K612R mice are viable, but develop age-dependent reduction of RIPK1 expression, spontaneous intestinal inflammation and splenomegaly, which can be rescued by antibiotic treatment and partially by Ripk3 deficiency. Furthermore, we show that the interaction of RIPK1 with FADD contributes to suppressing the activation of RIPK3 mediated by TLRs signaling. Our study demonstrates the distinct roles of K612 ubiquitination in mRIPK1/K627 ubiquitination in hRIPK1 in regulating its pro-death kinase activity in response to TNFα and pro-survival activity in response to TLRs signaling.

Entities:  

Year:  2020        PMID: 33311474     DOI: 10.1038/s41467-020-19935-y

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  57 in total

1.  TNF-dependent recruitment of the protein kinase RIP to the TNF receptor-1 signaling complex.

Authors:  H Hsu; J Huang; H B Shu; V Baichwal; D V Goeddel
Journal:  Immunity       Date:  1996-04       Impact factor: 31.745

2.  The role of 4-thiouridine in lethal effects and in DNA backbone breakage caused by 334 nm ultraviolet light in Escherichia coli.

Authors:  M J Peak; J G Peak; L Nerad
Journal:  Photochem Photobiol       Date:  1983-02       Impact factor: 3.421

3.  Death-domain dimerization-mediated activation of RIPK1 controls necroptosis and RIPK1-dependent apoptosis.

Authors:  Huyan Meng; Zhen Liu; Xingyan Li; Huibing Wang; Taijie Jin; Guowei Wu; Bing Shan; Dana E Christofferson; Chunting Qi; Qiang Yu; Ying Li; Junying Yuan
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-12       Impact factor: 11.205

4.  Necroptosis is active in children with inflammatory bowel disease and contributes to heighten intestinal inflammation.

Authors:  Maria Pierdomenico; Anna Negroni; Laura Stronati; Roberta Vitali; Enrica Prete; John Bertin; Peter J Gough; Marina Aloi; Salvatore Cucchiara
Journal:  Am J Gastroenterol       Date:  2013-12-10       Impact factor: 10.864

5.  RIPK1 regulates RIPK3-MLKL-driven systemic inflammation and emergency hematopoiesis.

Authors:  James A Rickard; Joanne A O'Donnell; Joseph M Evans; Najoua Lalaoui; Ashleigh R Poh; TeWhiti Rogers; James E Vince; Kate E Lawlor; Robert L Ninnis; Holly Anderton; Cathrine Hall; Sukhdeep K Spall; Toby J Phesse; Helen E Abud; Louise H Cengia; Jason Corbin; Sandra Mifsud; Ladina Di Rago; Donald Metcalf; Matthias Ernst; Grant Dewson; Andrew W Roberts; Warren S Alexander; James M Murphy; Paul G Ekert; Seth L Masters; David L Vaux; Ben A Croker; Motti Gerlic; John Silke
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

6.  RIPK1 blocks early postnatal lethality mediated by caspase-8 and RIPK3.

Authors:  Christopher P Dillon; Ricardo Weinlich; Diego A Rodriguez; James G Cripps; Giovanni Quarato; Prajwal Gurung; Katherine C Verbist; Taylor L Brewer; Fabien Llambi; Yi-Nan Gong; Laura J Janke; Michelle A Kelliher; Thirumala-Devi Kanneganti; Douglas R Green
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

7.  RIP1 suppresses innate immune necrotic as well as apoptotic cell death during mammalian parturition.

Authors:  William J Kaiser; Lisa P Daley-Bauer; Roshan J Thapa; Pratyusha Mandal; Scott B Berger; Chunzi Huang; Aarthi Sundararajan; Hongyan Guo; Linda Roback; Samuel H Speck; John Bertin; Peter J Gough; Siddharth Balachandran; Edward S Mocarski
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-12       Impact factor: 11.205

8.  Human RIPK1 deficiency causes combined immunodeficiency and inflammatory bowel diseases.

Authors:  Yue Li; Marita Führer; Ehsan Bahrami; Piotr Socha; Maja Klaudel-Dreszler; Amira Bouzidi; Yanshan Liu; Anna S Lehle; Thomas Magg; Sebastian Hollizeck; Meino Rohlfs; Raffaele Conca; Michael Field; Neil Warner; Slae Mordechai; Eyal Shteyer; Dan Turner; Rachida Boukari; Reda Belbouab; Christoph Walz; Moritz M Gaidt; Veit Hornung; Bernd Baumann; Ulrich Pannicke; Eman Al Idrissi; Hamza Ali Alghamdi; Fernando E Sepulveda; Marine Gil; Geneviève de Saint Basile; Manfred Hönig; Sibylle Koletzko; Aleixo M Muise; Scott B Snapper; Klaus Schwarz; Christoph Klein; Daniel Kotlarz
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-27       Impact factor: 11.205

9.  Biallelic RIPK1 mutations in humans cause severe immunodeficiency, arthritis, and intestinal inflammation.

Authors:  Delphine Cuchet-Lourenço; Davide Eletto; Changxin Wu; Vincent Plagnol; Olivier Papapietro; James Curtis; Lourdes Ceron-Gutierrez; Chris M Bacon; Scott Hackett; Badr Alsaleem; Mailis Maes; Miguel Gaspar; Ali Alisaac; Emma Goss; Eman AlIdrissi; Daniela Siegmund; Harald Wajant; Dinakantha Kumararatne; Mofareh S AlZahrani; Peter D Arkwright; Mario Abinun; Rainer Doffinger; Sergey Nejentsev
Journal:  Science       Date:  2018-07-19       Impact factor: 47.728

10.  Receptor-interacting protein kinase 1 (RIPK1) as a therapeutic target.

Authors:  Lauren Mifflin; Dimitry Ofengeim; Junying Yuan
Journal:  Nat Rev Drug Discov       Date:  2020-07-15       Impact factor: 112.288

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  13 in total

Review 1.  Tumor-intrinsic and immune modulatory roles of receptor-interacting protein kinases.

Authors:  A Justin Rucker; Francis Ka-Ming Chan
Journal:  Trends Biochem Sci       Date:  2022-01-05       Impact factor: 13.807

2.  Nuclear RIPK1 promotes chromatin remodeling to mediate inflammatory response.

Authors:  Wanjin Li; Bing Shan; Chengyu Zou; Huibing Wang; Meng-Meng Zhang; Hong Zhu; Masanori Gomi Naito; Daichao Xu; Vica Jean Manuel; Lauren Mifflin; Zhaodong Hou; John Ravits; Junying Yuan
Journal:  Cell Res       Date:  2022-06-03       Impact factor: 46.297

Review 3.  The regulation of necroptosis by ubiquitylation.

Authors:  Yiliang Chen; Wenqing Ren; Qingsong Wang; Yuan He; Dan Ma; Zhenyu Cai
Journal:  Apoptosis       Date:  2022-08-08       Impact factor: 5.561

Review 4.  Site-specific ubiquitination: Deconstructing the degradation tag.

Authors:  Emma C Carroll; Susan Marqusee
Journal:  Curr Opin Struct Biol       Date:  2022-03-02       Impact factor: 7.786

5.  The deubiquitinase OTUD1 inhibits colonic inflammation by suppressing RIPK1-mediated NF-κB signaling.

Authors:  Bo Wu; Lihua Qiang; Yong Zhang; Yesheng Fu; Mengyuan Zhao; Zehui Lei; Zhe Lu; Yan-Ge Wei; Hongmiao Dai; Yingwei Ge; Mingqiu Liu; Xuemei Zhou; Zhiqiang Peng; Hongchang Li; Chun-Ping Cui; Jing Wang; Hui Zheng; Cui Hua Liu; Lingqiang Zhang
Journal:  Cell Mol Immunol       Date:  2021-12-07       Impact factor: 11.530

6.  Unlocking the Recovery Potential: JMJD3 Inhibition-Mediated SAPK/JNK Signaling Inactivation Supports Endogenous Oligodendrocyte-Lineage Commitment Post Mammalian Spinal Cord Injury.

Authors:  Zhang Bo-Yin; Zhu Qingsan; Ma Yihang; Yang Fan; Zhu Yuhang; Chang Pengyu
Journal:  Neurochem Res       Date:  2021-01-11       Impact factor: 3.996

Review 7.  Over Fifty Years of Life, Death, and Cannibalism: A Historical Recollection of Apoptosis and Autophagy.

Authors:  Mahmoud Izadi; Tayyiba Akbar Ali; Ehsan Pourkarimi
Journal:  Int J Mol Sci       Date:  2021-11-18       Impact factor: 5.923

8.  The Identification of Candidate Biomarkers and Pathways in Atherosclerosis by Integrated Bioinformatics Analysis.

Authors:  Youwei Lu; Xi Zhang; Wei Hu; Qianhong Yang
Journal:  Comput Math Methods Med       Date:  2021-11-10       Impact factor: 2.238

9.  IKK-mediated CYLD phosphorylation and cellular redox activity.

Authors:  Adnan Erol
Journal:  Mol Med       Date:  2022-02-02       Impact factor: 6.354

Review 10.  The Signaling Pathway of TNF Receptors: Linking Animal Models of Renal Disease to Human CKD.

Authors:  Irina Lousa; Flávio Reis; Alice Santos-Silva; Luís Belo
Journal:  Int J Mol Sci       Date:  2022-03-18       Impact factor: 5.923

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