Literature DB >> 33309781

Splicing factors: Insights into their regulatory network in alternative splicing in cancer.

Jun-Xian Du1, Gui-Qi Zhu2, Jia-Liang Cai2, Biao Wang2, Yi-Hong Luo1, Cong Chen1, Cheng-Zhe Cai1, Si-Jia Zhang1, Jian Zhou2, Jia Fan2, Wei Zhu3, Zhi Dai4.   

Abstract

More than 95% of all human genes are alternatively spliced after transcription, which enriches the diversity of proteins and regulates transcript and/or protein levels. The splicing isoforms produced from the same gene can manifest distinctly, even exerting opposite effects. Mounting evidence indicates that the alternative splicing (AS) mechanism is ubiquitous in various cancers and drives the generation and maintenance of various hallmarks of cancer, such as enhanced proliferation, inhibited apoptosis, invasion and metastasis, and angiogenesis. Splicing factors (SFs) play pivotal roles in the recognition of splice sites and the assembly of spliceosomes during AS. In this review, we mainly discuss the similarities and differences of SF domains, the details of SF function in AS, the effect of SF-driven pathological AS on different hallmarks of cancer, and the main drivers of SF expression level and subcellular localization. In addition, we briefly introduce the application prospects of targeted therapeutic strategies, including small-molecule inhibitors, siRNAs and splice-switching oligonucleotides (SSOs), from three perspectives (drivers, SFs and pathological AS). Finally, we share our insights into the potential direction of research on SF-centric AS-related regulatory networks.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Alternative splicing; Hallmarks of cancer; Post-transcriptional modification; Splicing factors; Therapeutic targets; Transcriptional modification

Year:  2020        PMID: 33309781     DOI: 10.1016/j.canlet.2020.11.043

Source DB:  PubMed          Journal:  Cancer Lett        ISSN: 0304-3835            Impact factor:   8.679


  9 in total

Review 1.  Impacts and mechanisms of alternative mRNA splicing in cancer metabolism, immune response, and therapeutics.

Authors:  Qiu Peng; Yujuan Zhou; Linda Oyang; Nayiyuan Wu; Yanyan Tang; Min Su; Xia Luo; Ying Wang; Xiaowu Sheng; Jian Ma; Qianjin Liao
Journal:  Mol Ther       Date:  2021-11-15       Impact factor: 11.454

2.  Comprehensive analysis of spliceosome genes and their mutants across 27 cancer types in 9070 patients: clinically relevant outcomes in the context of 3P medicine.

Authors:  Zhen Ye; Aiying Bing; Shulian Zhao; Shuying Yi; Xianquan Zhan
Journal:  EPMA J       Date:  2022-05-10       Impact factor: 8.836

3.  Identification of the TSSK4 Alternative Spliceosomes and Analysis of the Function of the TSSK4 Protein in Yak (Bos grunniens).

Authors:  Xingdong Wang; Jie Pei; Lin Xiong; Shaoke Guo; Mengli Cao; Yandong Kang; Pengjia Bao; Xiaoyun Wu; Min Chu; Chunnian Liang; Ping Yan; Xian Guo
Journal:  Animals (Basel)       Date:  2022-05-27       Impact factor: 3.231

4.  Splicing factor SRSF1 promotes breast cancer progression via oncogenic splice switching of PTPMT1.

Authors:  Jun-Xian Du; Yi-Hong Luo; Si-Jia Zhang; Biao Wang; Cong Chen; Gui-Qi Zhu; Ping Zhu; Cheng-Zhe Cai; Jing-Lei Wan; Jia-Liang Cai; Shi-Ping Chen; Zhi Dai; Wei Zhu
Journal:  J Exp Clin Cancer Res       Date:  2021-05-15

5.  Transcriptome analysis of clock disrupted cancer cells reveals differential alternative splicing of cancer hallmarks genes.

Authors:  Deeksha Malhan; Alireza Basti; Angela Relógio
Journal:  NPJ Syst Biol Appl       Date:  2022-05-12

6.  Suppression of Heterogeneous Nuclear Ribonucleoprotein C Inhibit Hepatocellular Carcinoma Proliferation, Migration, and Invasion via Ras/MAPK Signaling Pathway.

Authors:  Jiejun Hu; Dong Cai; Zhibo Zhao; Guo-Chao Zhong; Jianping Gong
Journal:  Front Oncol       Date:  2021-04-16       Impact factor: 6.244

7.  Functional analysis of the stable phosphoproteome reveals cancer vulnerabilities.

Authors:  Di Xiao; Hani Jieun Kim; Ignatius Pang; Pengyi Yang
Journal:  Bioinformatics       Date:  2022-01-07       Impact factor: 6.937

8.  Immunological Characteristics of Alternative Splicing Profiles Related to Prognosis in Bladder Cancer.

Authors:  Fangdie Ye; Yingchun Liang; Zhang Cheng; Yufei Liu; Jimeng Hu; Weijian Li; Xinan Chen; Jiahao Gao; Haowen Jiang
Journal:  Front Immunol       Date:  2022-06-13       Impact factor: 8.786

9.  Identification of Alternative Splicing Events Associated with Paratuberculosis in Dairy Cattle Using Multi-Tissue RNA Sequencing Data.

Authors:  Houcheng Li; Jinfeng Huang; Junnan Zhang; Yahui Gao; Bo Han; Dongxiao Sun
Journal:  Genes (Basel)       Date:  2022-03-11       Impact factor: 4.096

  9 in total

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