Literature DB >> 33307484

High-throughput proteomics and metabolomic studies guide re-engineering of metabolic pathways in eukaryotic microalgae: A review.

Hillol Chakdar1, Mafruha Hasan2, Sunil Pabbi3, Helena Nevalainen4, Pratyoosh Shukla5.   

Abstract

Eukaryotic microalgae are a rich source of commercially important metabolites including lipids, pigments, sugars, amino acids and enzymes. However, their inherent genetic potential is usually not enough to support high level production of metabolites of interest. In order to move on from the traditional approach of improving product yields by modification of the cultivation conditions, understanding the metabolic pathways leading to the synthesis of the bioproducts of interest is crucial. Identification of new targets for strain engineering has been greatly facilitated by the rapid development of high-throughput sequencing and spectroscopic techniques discussed in this review. Despite the availability of high throughput analytical tools, examples of gathering and application of proteomic and metabolomic data for metabolic engineering of microalgae are few and mainly limited to lipid production. The present review highlights the application of contemporary proteomic and metabolomic techniques in eukaryotic microalgae for redesigning pathways for enhanced production of algal metabolites.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Mass spectrometry; Metabolic engineering; Metabolome; Microalgae; Proteome

Year:  2020        PMID: 33307484     DOI: 10.1016/j.biortech.2020.124495

Source DB:  PubMed          Journal:  Bioresour Technol        ISSN: 0960-8524            Impact factor:   9.642


  9 in total

Review 1.  Cyanobacterial secondary metabolites towards improved commercial significance through multiomics approaches.

Authors:  Shaloo Verma; Shobit Thapa; Nahid Siddiqui; Hillol Chakdar
Journal:  World J Microbiol Biotechnol       Date:  2022-04-29       Impact factor: 3.312

Review 2.  Advantages of Heterotrophic Microalgae as a Host for Phytochemicals Production.

Authors:  Surumpa Jareonsin; Chayakorn Pumas
Journal:  Front Bioeng Biotechnol       Date:  2021-02-12

Review 3.  Microalgae Bioactive Carbohydrates as a Novel Sustainable and Eco-Friendly Source of Prebiotics: Emerging Health Functionality and Recent Technologies for Extraction and Detection.

Authors:  Mostafa Gouda; Musa A Tadda; Yinglei Zhao; F Farmanullah; Bingquan Chu; Xiaoli Li; Yong He
Journal:  Front Nutr       Date:  2022-03-15

4.  Extracting protein from microalgae (Tetraselmis chuii) for proteome analysis.

Authors:  Liliana Anjos; João Estêvão; Carlos Infante; Lalia Mantecón; Deborah Mary Power
Journal:  MethodsX       Date:  2022-02-17

Review 5.  Genetic Engineering of Microalgae for Secondary Metabolite Production: Recent Developments, Challenges, and Future Prospects.

Authors:  Arathi Sreenikethanam; Subhisha Raj; Rajesh Banu J; Poornachandar Gugulothu; Amit K Bajhaiya
Journal:  Front Bioeng Biotechnol       Date:  2022-03-23

Review 6.  Random Mutagenesis as a Promising Tool for Microalgal Strain Improvement towards Industrial Production.

Authors:  Mafalda Trovão; Lisa M Schüler; Adriana Machado; Gabriel Bombo; Sofia Navalho; Ana Barros; Hugo Pereira; Joana Silva; Filomena Freitas; João Varela
Journal:  Mar Drugs       Date:  2022-06-30       Impact factor: 6.085

7.  Metabolic and Proteomic Analysis of Chlorella sorokiniana, Chloroidium saccharofilum, and Chlorella vulgaris Cells Cultured in Autotrophic, Photoheterotrophic, and Mixotrophic Cultivation Modes.

Authors:  Agata Piasecka; Andrea Baier
Journal:  Molecules       Date:  2022-07-27       Impact factor: 4.927

8.  Endoplasmic Reticulum Subproteome Analysis Reveals Underlying Defense Mechanisms of Wheat Seedling Leaves under Salt Stress.

Authors:  Junwei Zhang; Dongmiao Liu; Dong Zhu; Nannan Liu; Yueming Yan
Journal:  Int J Mol Sci       Date:  2021-05-03       Impact factor: 5.923

Review 9.  Development of the "Applied Proteomics" Concept for Biotechnology Applications in Microalgae: Example of the Proteome Data in Nannochloropsis gaditana.

Authors:  Rafael Carrasco-Reinado; María Bermudez-Sauco; Almudena Escobar-Niño; Jesús M Cantoral; Francisco Javier Fernández-Acero
Journal:  Mar Drugs       Date:  2021-12-29       Impact factor: 5.118

  9 in total

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