Literature DB >> 33305634

dPCR application in liquid biopsies: divide and conquer.

Andrea Moreno-Manuel1,2, Silvia Calabuig-Fariñas1,2,3,4, Antonia Obrador-Hevia5,6, Ana Blasco4,7, Amaya Fernández-Díaz7, Rafael Sirera2,4,8, Carlos Camps1,2,4,7,9, Eloisa Jantus-Lewintre1,2,4,8.   

Abstract

Introduction: Precision medicine is already a reality in oncology, since biomarker-driven therapies have clearly improved patient survival. Furthermore, a new, minimally invasive strategy termed 'liquid biopsy' (LB) has revolutionized the field by allowing comprehensive cancer genomic profiling through the analysis of circulating tumor DNA (ctDNA). However, its detection requires extremely sensitive and efficient technologies. A powerful molecular tool based on the principle of 'divide and conquer' has emerged to solve this problem. Thus, digital PCR (dPCR) allows absolute and accurate quantification of target molecules.Areas covered: In this review we will discuss the fundamentals of dPCR and the most common approaches used for partition of samples and quantification. The advantages and limitations of dPCR will be mentioned in the context of LB in oncology.Expert opinion: In our opinion, dPCR has proven to be one of the most sensitive methods available for LB analysis, albeit some aspects such as its capacity of multiplexing and protocol standardization still require further improvements. Furthermore, the increasing sensitivities and lower costs of next generation sequencing (NGS) methods position dPCR as a confirmatory and complementary technique for NGS results which will likely prove to be very useful for treatment monitoring and assessing minimal residual disease.

Entities:  

Keywords:  Digital PCR; biomarker; cfDNA; ctDNA; liquid biopsy; oncology.; precision medicine

Mesh:

Year:  2020        PMID: 33305634     DOI: 10.1080/14737159.2021.1860759

Source DB:  PubMed          Journal:  Expert Rev Mol Diagn        ISSN: 1473-7159            Impact factor:   5.225


  2 in total

1.  Best Practices in qPCR and dPCR Validation in Regulated Bioanalytical Laboratories.

Authors:  Amanda Hays; Rafiq Islam; Katie Matys; Dave Williams
Journal:  AAPS J       Date:  2022-02-22       Impact factor: 4.009

Review 2.  Liquid biopsy to detect resistance mutations against anti-epidermal growth factor receptor therapy in metastatic colorectal cancer.

Authors:  Guillermo Valenzuela; Mauricio Burotto; Katherine Marcelain; Jaime González-Montero
Journal:  World J Gastrointest Oncol       Date:  2022-09-15
  2 in total

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