| Literature DB >> 33300686 |
Miaomiao Yang1, Yunliang Qiu2, Yanyu Jin3, Wenpei Liu1, Qingliang Wang4, Honggang Yi1, Shaowen Tang1.
Abstract
Anti-tuberculosis drug-induced hepatotoxicity (ATDH) is a serious adverse drug reaction. Conflicting results have been obtained regarding the associations of nuclear receptor subfamily 1 group I member 2 (NR1I2) gene polymorphisms on susceptibility to ATDH. Therefore, we aimed to evaluate the associations using a systematic review/meta-analysis approach. PubMed, Medline, Cochrane Library, Web of Science and SinoMed databases were searched for all eligible studies from inception to June 10, 2020. Pooled adjusted odds ratios (ORs) with 95% confidence intervals (CIs) were employed to evaluate the strength of the association between the NR1I2 polymorphisms and the risk of ATDH. Subgroup analysis was performed by region of origin, and meta-regression were performed to detect potential sources of heterogeneity. A total of five case-control studies involving 572 cases and 1867 controls were identified. Fourteen SNPs in the NR1I2 gene have been reported, and the most heavily studied SNPs were rs3814055 and rs7643645. The pooled estimates did not exhibit any significant associations between SNPs rs3814055 and rs7643645 and the risk of ATDH (rs3814055: dominant model, OR = 1.00, 95% CI: 0.82-1.22, P = 1.00; recessive model, OR = 1.17, 95% CI: 0.76-1.78, P = .48; rs7643645: dominant model, OR = 1.04, 95% CI: 0.64-1.68, P = .89; recessive model, OR = 0.98, 95% CI: 0.65-1.49, P = .93). Subgroup analysis obtained similar negative results in Chinese patients, and the diagnostic criteria of ATDH may be the source of heterogeneity. Based on the meta-analysis described in this report, we did not observe any association between NR1I2 gene polymorphisms and ATDH susceptibility. However, this conclusion should be interpreted with caution due to the low number of studies and the relatively small sample size.Entities:
Keywords: NR1I2; anti-tuberculosis drug-induced hepatotoxicity; genetic polymorphisms; meta-analysis; pregnane X receptor
Year: 2020 PMID: 33300686 PMCID: PMC7726956 DOI: 10.1002/prp2.696
Source DB: PubMed Journal: Pharmacol Res Perspect ISSN: 2052-1707
Figure 1PRISMA flow chart for literature search
Characteristics of the studies included in the meta‐analysis
| Study ID | Country | Study design |
Male (%) |
Age (years) |
Sample size (Cases/Controls) |
Causality assessment | Diagnostic criteria | SNPs |
Genotyping method |
Adjusted covariates |
Quality score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Zazuli 2015 | Indonesia | Nested case‐control | 67.9 | NR | 35/71 | NR | >1 ULN | rs3814055 | PCR‐ARMS | Sex, age | 6 |
| Wang 2015 | China Taiwan | Nested case‐control | 65.6 | 57.6 | 70/285 | NR | >3 ULN | rs3814055, rs12488820, rs2461823, rs7643645, rs6785049, rs3814057 | Sequenom MassARRAY | NR | 6 |
| Wang 2019 | China | Case‐control | 49.4 | 38.5 | 203/299 | NR | >2 ULN | rs7643645, rs6785049, rs3732357, rs3814055, rs2472682, rs3814057, rs2472677 | iMLDR | Ethnicity, age, gender, height, weight, smoking, drinking, HbsAg status | 6 |
| Zhang 2019 | China | Case‐control | 59.5 | 41.2 | 118/628 | NR | >3 ULN | rs3814055, rs13059232, rs7643645, rs3732360 | SNPscan | Sex, age | 6 |
| Yang 2020 | China | 1:4 matched case‐control | 73.3 | 50.4 | 146/584 | RUCAM | >3 ULN | rs2276707, rs3814055, rs1523127, rs13059232, rs2461823, rs2461825, rs7643645 | TaqMan | Liver diseases history, hepatoprotectant use, smoking history, drinking history | 7 |
Abbreviations: iMLDR, improved multiplex ligation detection reaction technique; NR, Not Report; PCR‐ARMS, polymerase chain reaction–amplification refractory mutation system; RUCAM, Roussel Uclaf Causality Assessment Method; SNPs, single‐nucleotide polymorphisms; ULN, Upper Limit of Normal.
Matched with age (within 5 years old), sex, and treatment history.
Figure 2Forest plot of the relation between SNP rs3814055 (dominant model) and the risk of ATDH with the fixed effects model
Figure 3Forest plot of the relation between SNP rs3814055 (recessive model) and the risk of ATDH with the fixed effects model
Meta‐analysis results of the association between gene polymorphism of NR1I2 and the susceptibility of ATDH
| Patients source | SNPs |
Study numbers | Dominant model | Recessive model | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Heterogeneity test | Overall effect | Heterogeneity test | Overall effect | |||||||||
| χ2 | P‐value | I2 (%) | OR(95%CI) | P‐value | χ2 | P‐value | I2 (%) | OR(95%CI) | P‐value | |||
| All patients | rs3814055 | 5 | 7.35 | 0.12 | 46 | 1.00(0.82‐1.22) | 1.00 | 6.21 | 0.18 | 36 | 1.17(0.76‐1.78) | 0.48 |
| rs7643645 | 4 | 13.13 | 0.01 | 77 | 1.04(0.64‐1.68) | 0.89 | 8.55 | 0.04 | 65 | 0.98(0.65‐1.49) | 0.93 | |
| rs13059232 | 2 | 2.20 | 0.14 | 55 | 1.09(0.82‐1.43) | 0.56 | 0.06 | 0.80 | 0 | 1.18(0.82‐1.70) | 0.37 | |
| rs2461823 | 2 | 0.02 | 0.88 | 0 | 1.25(0.91‐1.73) | 0.17 | 4.93 | 0.03 | 80 | 0.73(0.30‐1.78) | 0.49 | |
| rs3814057 | 2 | 0.13 | 0.72 | 0 | 1.36(0.93‐1.98) | 0.11 | 0.87 | 0.38 | 0 | 0.85(0.59‐1.22) | 0.38 | |
| rs6785049 | 2 | 0.00 | 0.98 | 0 | 1.21(0.87‐1.68) | 0.25 | 3.13 | 0.08 | 68 | 0.99(0.42‐2.32) | 0.97 | |
| Chinese patients | rs3814055 | 4 | 6.92 | 0.07 | 57 | 0.98(0.71‐1.35) | 0.89 | 3.98 | 0.26 | 25 | 1.09(0.71‐1.68) | 0.69 |
Abbreviations: 95%CI, 95% confidence interval; ATDH, anti‐tuberculosis drug‐induced hepatotoxicity; NR1I2, nuclear receptor subfamily 1 group I member 2; OR, Odds ratio; SNPs, single‐nucleotide polymorphisms.
Figure 4Forest plot of the relation between SNP rs7643645 (dominant model) and the risk of ATDH with the random effects model
Figure 5Forest plot of the relation between SNP rs7643645 (recessive model) and the risk of ATDH with the random effects model
Meta‐analysis results of the association between six SNPs in NR1I2 and the risk of ATDH in allele comparison models
| SNPs |
Study numbers | Heterogeneity test | Overall effect | |||
|---|---|---|---|---|---|---|
| χ2 |
| I2(%) | OR(95% CI) |
| ||
| rs3814055 (T vs. C) | 5 | 10.73 | 0.03 | 63 | 1.03(0.77‐1.37) | 0.84 |
| rs7643645 (G vs. A) | 4 | 16.54 | <0.001 | 82 | 1.03(0.74‐1.45) | 0.85 |
| rs13059232 (C vs. T) | 2 | 1.33 | 0.25 | 25 | 1.09(0.90‐1.32) | 0.40 |
| rs2461823 (C vs. T) | 2 | 0.67 | 0.41 | 0 | 1.21(0.98‐1.50) | 0.08 |
| rs3814057 (C vs. A) | 2 | 0.20 | 0.65 | 0 | 1.02(0.83‐1.26) | 0.83 |
| rs6785049 (G vs. A) | 2 | 0.00 | 0.95 | 0 | 0.98(0.79‐1.21) | 0.83 |
Abbreviations: 95% CI, 95% confidence interval; ATDH, anti‐tuberculosis drug‐induced hepatotoxicity; NR1I2, nuclear receptor subfamily 1 group I member 2; OR, Odds ratio; SNPs, single‐nucleotide polymorphisms.
Results of univariate meta‐regression analyses of SNP rs7633645 under different models
| Model | Covariates | I2 | R2 (%) |
|
|---|---|---|---|---|
| Dominant model | None | 0.120 | ‐ | ‐ |
| (AG + GG Vs. AA) | Diagnostic criteria of ATDH | 0.098 | 18.29 | 0.182 |
| Causality assessment | 0.022 | 81.56 | 0.068 | |
| Adjustment of covariates | 0.104 | 13.54 | 0.293 | |
| Recessive model | None | 0.066 | ‐ | ‐ |
| (GG Vs. AA + AG) | Diagnostic criteria of ATDH | 0 | 100.00 | 0.039 |
| Causality assessment | 0.017 | 74.44 | 0.075 | |
| Adjustment of covariates | 0.135 | 0 | 0.829 |
Abbreviations: ATDH, anti‐tuberculosis drug‐induced hepatotoxicity; R2, amount of heterogeneity accounted for; SNP, single‐nucleotide polymorphism.