| Literature DB >> 33298635 |
Masanori Nishimura1,2, Atsushi Yamashita2, Yunosuke Matsuura3, Junichi Okutsu4, Aiko Fukahori4, Tsuyoshi Hirata4, Tomohiro Nishizawa5, Hirohito Ishii1, Kazunari Maekawa2, Eriko Nakamura2, Kazuo Kitamura3, Kunihide Nakamura1, Yujiro Asada2.
Abstract
AIMS: Inflammation and hypertension contribute to the progression of atherosclerotic aneurysm in the aorta. Vascular cell metabolism is regarded to modulate atherogenesis, but the metabolic alterations that occur in atherosclerotic aneurysm remain unknown. The present study aimed to identify metabolic pathways and metabolites in aneurysmal walls and examine their roles in atherogenesis.Entities:
Keywords: Aneurysm; Atherosclerosis; Kynureninase; Kynurenine pathway; Macrophage
Mesh:
Substances:
Year: 2020 PMID: 33298635 PMCID: PMC8592691 DOI: 10.5551/jat.58248
Source DB: PubMed Journal: J Atheroscler Thromb ISSN: 1340-3478 Impact factor: 4.928
Clinical characteristics of study patients ( n = 42)
|
| |
|---|---|
| Age | 72.9±7.8 |
| Male gender | 32 (76%) |
| Body mass index (Kg/m 2 ) | 23.3±9.8 |
| Systolic blood pressure (mmHg) | 131±13 |
| Diastolic blood pressure (mmHg) | 76±12 |
| Aneurysm maximum diameter (mm) | 56.4±2.3 |
| Hypertension | 40 (95) |
| Diabetes mellitus or impaired glucose tolerance | 19 (45) |
| Dyslipidemia | 33 (79) |
| Chronic obstructive pulmonary disease | 4 (10) |
| Smoking | 31 (74) |
| Coronary artery disease | 11 (26) |
| Cerebrovascular disease | 11 (26) |
| Sample location | |
| Thoracic aorta | 17 (40) |
| Abdominal aorta | 25 (60) |
| Complete blood count and blood chemistry | |
| White blood cell (/µL) | 6376±1466 |
| Hemoglobin(g/dL) | 13.1±1.6 |
| Hematocrit (%) | 39.7±4.8 |
| Platelet (×10 4 /µL) | 18.1±5.3 |
| Total Cholesterol (mg/dL) | 179.1±33.4 |
| High density lipoprotein cholesterol (mg/dL) | 44.9±10.2 |
| Low density lipoprotein cholesterol (mg/dL) | 111.5±31.4 |
| Triglyceride (mg/dL) | 122.3±64.3 |
| Fasting blood glucose (mg/dL) | 85.9±0.6 |
| Fasting insulin (µU/mL) | 9.0±10.0 |
| HemoglobinA 1C (%) | 5.8±0.6 |
| Homeostasis model assessment insulin resistance | 2.07±2.87 |
| Creatinine (mg/dL) | 1.03±0.3 |
| C-reactive protein (mg/dL) | 0.20±0.24 |
| Medication | |
| Angiotensin-converting enzyme inhibitors | 5 (12) |
| Angiotensin receptor blockers | 23 (55) |
| β-blocker | 12 (29) |
| Calcium channel blockers | 31 (74) |
| Aspirin | 11 (26) |
| Statins | 25 (60) |
| Anti-diabetics | 4 (10) |
Differentially expressed upregulated genes (Log2 ratio > 3, Q<0.05)in aneurysm
| Probeset_Id | Gene_Symbol | Log2Ratio | Q value |
|---|---|---|---|
| 204580_at |
| 6.57 | 1.86164E-08 |
| 236028_at |
| 5.85 | 1.07746E-10 |
| 209395_at |
| 5.56 | 4.52479E-07 |
| 203936_s_at |
| 4.81 | 2.79815E-11 |
| 37892_at |
| 4.50 | 1.5779E-14 |
| 223484_at |
| 4.34 | 1.75656E-08 |
| 212942_s_at |
| 4.32 | 8.46489E-13 |
| 212657_s_at |
| 4.31 | 2.41151E-10 |
| 204475_at |
| 4.20 | 3.33309E-11 |
| 204259_at |
| 4.14 | 8.82392E-08 |
| 219434_at |
| 3.97 | 2.0773E-15 |
| 206134_at |
| 3.71 | 1.10951E-06 |
| 204430_s_at |
| 3.66 | 5.77635E-12 |
| 222939_s_at |
| 3.58 | 1.52386E-11 |
| 213909_at |
| 3.58 | 8.62686E-12 |
| 205943_at |
| 3.44 | 2.70123E-13 |
| 210004_at |
| 3.43 | 2.81577E-05 |
| 206858_s_at |
| 3.42 | 0.00037992 |
| 202888_s_at |
| 3.41 | 8.62166E-17 |
| 205242_at |
| 3.40 | 9.46235E-07 |
| 203665_at |
| 3.39 | 1.72862E-13 |
| 209351_at |
| 3.25 | 1.47257E-07 |
| 211643_x_at |
| 3.23 | 3.33309E-11 |
| 210845_s_at |
| 3.18 | 7.53482E-11 |
| 211645_x_at |
| 3.18 | 3.63523E-11 |
| 205568_at |
| 3.18 | 3.35934E-10 |
| 209875_s_at |
| 3.17 | 2.38724E-05 |
| 227566_at |
| 3.14 | 6.51337E-08 |
| 211634_x_at |
| 3.14 | 1.32342E-08 |
| 32128_at |
| 3.09 | 0.003213613 |
| 204638_at |
| 3.08 | 4.84916E-06 |
| 202859_x_at |
| 3.06 | 8.59447E-07 |
| 230748_at |
| 3.05 | 1.87046E-08 |
| 209555_s_at |
| 3.02 | 1.91741E-08 |
| 205306_x_at |
| 3.02 | 1.03391E-08 |
Differentially expressed downregulated genes (Log2 ratio <-3, Q<0.05) in aneurysm
| Probeset_Id | Gene_Symbol | Log2Ratio | q.value |
|---|---|---|---|
| 229339_at |
| -3.01 | 1.04239E-09 |
| 206163_at |
| -3.02 | 2.86195E-05 |
| 237094_at |
| -3.08 | 4.73173E-08 |
| 206339_at |
| -3.21 | 0.001015519 |
| 210302_s_at |
| -3.22 | 2.66037E-05 |
| 226281_at |
| -3.22 | 8.05926E-07 |
| 205358_at |
| -3.27 | 7.54217E-11 |
| 219791_s_at |
| -3.34 | 9.79795E-07 |
| 213228_at |
| -3.39 | 5.33939E-09 |
| 228796_at |
| -3.44 | 5.30392E-06 |
| 209793_at |
| -3.47 | 1.57857E-09 |
| 227209_at |
| -3.56 | 1.49466E-09 |
| 210292_s_at |
| -3.69 | 4.09956E-07 |
| 214961_at |
| -3.80 | 8.21645E-11 |
| 1563933_a_at |
| -3.80 | 2.20896E-12 |
| 231626_at |
| -3.83 | 2.18209E-15 |
| 219837_s_at |
| -4.04 | 2.69301E-08 |
| 239913_at |
| -4.08 | 8.77746E-06 |
| 213745_at |
| -4.12 | 4.89661E-13 |
| 229831_at |
| -4.45 | 9.43889E-14 |
| 223869_at |
| -4.65 | 1.55716E-08 |
Fig.2. Metabolomic analysis of early atherosclerotic lesions and atherosclerotic aneurysms.Representative heatmap created using hierarchical clustering analysis shows metabolic differences between groups. Supplementary Table 5 shows the original data for each metabolite
Supplementary Table 5.Hierarchical clustering analysis of early atherosclerotic lesion and atherosclerotic aneurysmal lesion
Altered metabolites in atherosclerotic aneurysmal lesions compared with early atherosclerotic lesions
| Metabolite | KEGG ID | ratio | pathway |
|---|---|---|---|
| aneurysm/early atherosclerotic lesion > 1.5 (relative mean value) | |||
| Cystine | C00491, C01420 | 6.61 | cysteine and methionine metabolism |
|
| C01029 | 6.50 | |
|
| C12989 | 4.48 | |
| Daminozide | C10996 | 2.85 | |
| Ala-Ala | C00993 | ||
| Glycerophosphocholine | C00670 | 2.83 | glycerophospholipid metabolism |
| Quinic acid | C00296 | 2.65 | phenylalanine, tyrosine and tryptophan biosynthesis |
| Putrescine | C00134 | 2.15 | arginine and proline metabolism |
| 4-Methyl-2-oxovaleric acid | C00233 | 2.01 | |
| 3-Methyl-2-oxovaleric acid | C00671, C03465 | ||
| Spermidine | C00315 | 1.93 | polyamine metabolism |
| Glu-Glu | C01425 | 1.87 | |
| Kynurenine | C00328, C01718 | 1.83 | kynurenine metabolism |
| Dihydroxyacetone phosphate | C00111 | 1.80 | glycolysis/gluconeogenesis |
| Fructose 6-phosphate | C05345, C00085 | 1.76 | glycolysis/gluconeogenesis |
| Quinolinic acid | C03722 | 1.75 | kynurenine metabolism |
| Asymmetric dimethylarginine | C03626 | 1.71 | |
| Myristoleic acid | C08322 | 1.64 | |
| Gly-Gly | C02037 | 1.60 | |
|
| C00270 | 1.59 | amino sugar and nucleotide sugar metabolism |
| Mucic acid | C00879, C01807 | 1.58 | ascorbate and aldarate metabolism |
| aneurysm/early athrosclerotic lesion<0.5 (relative mean value) | |||
| Inosine | C00294 | 0.48 | purine metabolism |
|
| NoID | 0.47 | |
| Sedoheptulose 7-phosphate | C05382 | 0.47 | pentose phosphate pathway |
| 3-Phosphoglyceric acid | C00197 | 0.45 | glycolysis/gluconeogenesis |
| Lidocaine | C07073 | 0.44 | |
| Phosphoenolpyruvic acid | C00074 | 0.43 | glycolysis/gluconeogenesis |
| 2, 3-Diphosphoglyceric acid | C01159 | 0.41 | glycolysis/gluconeogenesis |
| Adenine | C00147 | 0.40 | purine metabolism |
| Adenosine triphosphate | C00002 | 0.39 | purine metabolism |
| Adenosine monophosphate | C00020 | 0.38 | purine metabolism |
| Cytidine | C00475 | 0.38 | pyrimidine metabolism |
| Phosphocreatine | C02305 | 0.38 | arginine and proline metabolism |
| Nicotinamide adenine dinucleotide | C00003 | 0.36 | coenzyme |
| gamma-aminobutyric acid | C00334 | 0.32 | |
| 3-Aminoisobutyric acid | C03284, C05145 | 0.29 | valine, leucine and isoleucine degradation |
| Nicotinamide mononucleotide | C00455 | 0.29 | nicotinate and nicotinamide metabolism |
| Hypotaurine | C00519 | 0.27 | taurineandhypotaurinemetabolism |
| 6-Phosphogluconic acid | C00345 | 0.26 | pentose phosphate pathway |
| Anserine_divalent | C01262 | 0.24 | histidine metabolism |
| Glutathione (GSSG)_divalent | C00127 | 0.20 | glutathione metabolism |
| Adenosine diphosphate | C00008 | 0.18 | purine metabolism |
| Adenosine | C00212 | 0.14 | purine metabolism |
Sequences of primer used for qPCR analysis
| Gene | ||
|---|---|---|
| Homo sapiens, tryptophan 2, 3-dioxygenase 2 | forward | 5’-CAGTGATCCTGAAACTGCTGGTG-3’ |
| reverse | 5’-TGCAAACTCTGGAAGCCTGATG-3’ | |
| Homo sapiens, indoleamine 2, 3-dioxygenase 1 | forward | 5’-TCCTGATTCCTGCAAGCCAG-3’ |
| reverse | 5’-AGTGCCTCCAGTTCCTTTGG-3’ | |
| Homo sapiens, kynureninase | forward | 5’-CAGCACTTTAATATTCCTGCCATCA-3’ |
| reverse | 5’-GCATGTGCTAGATCAAAGCCAAC-3’ | |
| Homo sapiens, kynurenine 3-monooxygenase | forward | 5’-AGATGATCACGCGATTTCAGACC-3’ |
| reverse | 5’-CAATGCCAACGCTGCACA-3’ | |
| Homo sapiens, 3-hydroxyanthranilate 3,4-dioxygenase | forward | 5’-CAGGAGCAGCTCAAAGTCATGTTC-3’ |
| reverse | 5’-ATGACCACATCCCGGTGTTTC-3’ | |
| Homo sapiens, interleukin 6 | forward | 5’-AAGCCAGAGCTGTGCAGATGAGTA-3’ |
| reverse | 5’-TGTCCTGCAGCCACTGGTTC-3’ | |
| Homo sapiens, interleukin 10 | forward | 5’-GAGATGCCTTCAGCAGAGTGAAGA-3’ |
| reverse | 5’-AAGGCTTGGCAACCCAGGTA-3’ | |
| Homo sapiens, matrix metalloproteinase-2 | forward | 5’-CTTCCAAGTCTGGAGCGATGTG-3’ |
| reverse | 5’-ATGAGCCAGGAGTCCGTCCTTA-3’ | |
| Homo sapiens, matrix metalloproteinase-9 | forward | 5’-TGGCACCACCACAACATCAC-3’ |
| reverse | 5’-GCAAAGGCGTCGTCAATCA-3’ | |
| Homo sapiens, tissue factor | forward | 5’-TGACCTCACCGACGAGATTGTGAA-3’ |
| reverse | 5’-TCTGAATTGTTGGCTGTCCGAGGT-3’ | |
| Homo sapiens, human β-actin | forward | 5’-TGGCACCCAGCACAATGAA-3’ |
| reverse | 5’-TAAGTCATAGTCCGCCTAGAAGCA-3’ | |
Biological processes associated with the upregulated genes
| Term | Overlap |
| Q-value | Combined Score |
|---|---|---|---|---|
| kynurenine metabolic process (GO: 0070189) | 2/8 | 8.28E-05 | 4.69E-02 | 1342.81 |
| regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (GO: 2001267) | 2/9 | 1.06E-04 | 4.52E-02 | 1161.83 |
| indolalkylamine catabolic process (GO: 0046218) | 2/9 | 1.06E-04 | 4.17E-02 | 1161.83 |
| tryptophan catabolic process (GO: 0006569) | 2/10 | 1.33E-04 | 4.84E-02 | 1020.27 |
| tryptophan metabolic process (GO: 0006568) | 2/10 | 1.33E-04 | 4.51E-02 | 1020.27 |
| intestinal absorption (GO: 0050892) | 2/13 | 2.29E-04 | 7.31E-02 | 736.76 |
| extracellular matrix disassembly (GO: 0022617) | 5/78 | 2.35E-07 | 3.99E-04 | 559.16 |
| B cell chemotaxis (GO: 0035754) | 1/6 | 1.05E-02 | 7.02E-01 | 434.35 |
| intermediate filament bundle assembly (GO: 0045110) | 1/6 | 1.05E-02 | 6.93E-01 | 434.35 |
| sterol import (GO: 0035376) | 1/6 | 1.05E-02 | 6.84E-01 | 434.35 |
| positive regulation of receptor binding (GO: 1900122) | 1/6 | 1.05E-02 | 6.75E-01 | 434.35 |
| cellular response to bacterial lipopeptide (GO: 0071221) | 1/6 | 1.05E-02 | 6.67E-01 | 434.35 |
| cholesterol import (GO: 0070508) | 1/6 | 1.05E-02 | 6.59E-01 | 434.35 |
| positive regulation of keratinocyte migration (GO: 0051549) | 1/6 | 1.05E-02 | 6.51E-01 | 434.35 |
| aromatic amino acid family catabolic process (GO: 0009074) | 2/20 | 5.54E-04 | 1.35E-01 | 428.46 |
Enrichment analysis using upregulated genes (Log2 ratio> 3, Q<0.05)
Biological processes associated with downregulated genes
| Term | Overlap |
| Q-value | Combined Score |
|---|---|---|---|---|
| negative regulation of bone resorption (GO: 0045779) | 1/6 | 6.28E-03 | 1 | 804.72 |
| positive regulation of blood pressure (GO: 0045777) | 1/6 | 6.28E-03 | 1 | 804.72 |
| positive regulation of catecholamine secretion (GO: 0033605) | 1/6 | 6.28E-03 | 1 | 804.72 |
| positive regulation of cardiac muscle tissue development (GO: 0055025) | 1/6 | 6.28E-03 | 1 | 804.72 |
| indolalkylamine metabolic process (GO: 0006586) | 1/6 | 6.28E-03 | 1 | 804.72 |
| synaptic transmission, glutamatergic (GO: 0035249) | 2/21 | 2.18E-04 | 1 | 764.77 |
| regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (GO: 0003256) | 1/7 | 7.33E-03 | 1 | 668.85 |
| regulation of smooth muscle cell differentiation (GO: 0051150) | 1/7 | 7.33E-03 | 1 | 668.85 |
| positive regulation of neurological system process (GO: 0031646) | 1/7 | 7.33E-03 | 1 | 668.85 |
| negative regulation of bone remodeling (GO: 0046851) | 1/8 | 8.37E-03 | 1 | 569.41 |
| regulation of positive chemotaxis (GO: 0050926) | 1/8 | 8.37E-03 | 1 | 569.41 |
| negative regulation of appetite (GO: 0032099) | 1/8 | 8.37E-03 | 1 | 569.41 |
| regulation of cell communication (GO: 0010646) | 2/71 | 2.50E-03 | 1 | 160.76 |
| modulation of chemical synaptic transmission (GO: 0050804) | 2/82 | 3.32E-03 | 1 | 132.62 |
| negative regulation of multicellular organismal process (GO: 0051241) | 2/125 | 7.53E-03 | 1 | 74.50 |
Enrichment analysis using downregulated genes (Log2 ratio > -3, Q<0.05)
Immunopositive area of cells and kynurenine enzymes in aorta
|
A. early lesion (
|
B. non-aneurysmal advanced lesion (
|
C. aneurysmal lesion (
|
| |||
|---|---|---|---|---|---|---|
| A vs. B | A vs. C | B vs. C | ||||
| SMA (smooth muscle cell) | 30.8 (10.8 - 42.4) | 16.2 (12.7 - 25.5) | 8.1 (0.2 - 26.6) | 0.12 | <0.001 | 0.36 |
| CD68 (macrophage) | 0.01 (0 - 0.08) | 1.6 (0.6 - 5.5) | 4.9 (0.3 - 11.9) | <0.01 | <0.0001 | 1 |
| CD3 (T cell) | 0.004 (0 - 0.03) | 0.04 (0.01 - 0.2) | 0.03 (0 - 0.7) | <0.01 | <0.01 | 1 |
| CD20 (B cell) | 0.007 (0 - 0.02) | 0.01 (0.003 - 0.07) | 0.42 (0.001 - 5.1) | 1 | <0.05 | 0.13 |
| CD138 (plasma cell) | 0.004 (0.001 - 0.2) | 0.019 (0.006 - 0.11) | 0.16 (0.01 - 0.53) | 0.12 | <0.001 | 0.29 |
| CD31 (endothelial cell) | 1.2 (0.7 - 3.4) | 0.8 (0.3 - 2.0) | 3.2 (0.9 - 6.3) | 0.87 | <0.05 | <0.01 |
| Kynureninase | 0.004 (0 - 0.19) | 0.4 (0.2 - 3.5) | 1.4 (0.004 - 15.1) | <0.05 | <0.001 | 1 |
| Kynurenine 3-monooxygenase | 0.02 (0 - 0.15) | 0.5 (0.2 - 2.7) | 0.6 (0 - 4.8) | <0.01 | <0.01 | 1 |
Data are expressed as median and range. SMA (smooth muscle actin) Kruskal-Wallis test with Dunn’s multiple comparison test.