Literature DB >> 33297373

Unexpected Gene-Flow in Urban Environments: The Example of the European Hedgehog.

Leon M F Barthel1,2, Dana Wehner3, Anke Schmidt4, Anne Berger1,2, Heribert Hofer2,3,5, Jörns Fickel4,6.   

Abstract

We use the European hedgehog (Erinaceus europaeus), a mammal with limited mobility, as a model species to study whether the structural matrix of the urban environment has an influence on population genetic structure of such species in the city of Berlin (Germany). Using ten established microsatellite loci we genotyped 143 hedgehogs from numerous sites throughout Berlin. Inclusion of all individuals in the cluster analysis yielded three genetic clusters, likely reflecting spatial associations of kin (larger family groups, known as gamodemes). To examine the potential bias in the cluster analysis caused by closely related individuals, we determined all pairwise relationships and excluded close relatives before repeating the cluster analysis. For this data subset (N = 65) both clustering algorithms applied (Structure, Baps) indicated the presence of a single genetic cluster. These results suggest that the high proportion of green patches in the city of Berlin provides numerous steppingstone habitats potentially linking local subpopulations. Alternatively, translocation of individuals across the city by hedgehog rescue facilities may also explain the existence of only a single cluster. We therefore propose that information about management activities such as releases by animal rescue centres should include location data (as exactly as possible) regarding both the collection and the release site, which can then be used in population genetic studies.

Entities:  

Keywords:  barrier; genetic cluster; hedgehog; urban

Year:  2020        PMID: 33297373      PMCID: PMC7762246          DOI: 10.3390/ani10122315

Source DB:  PubMed          Journal:  Animals (Basel)        ISSN: 2076-2615            Impact factor:   3.231


  35 in total

1.  Assessing allelic dropout and genotype reliability using maximum likelihood.

Authors:  Craig R Miller; Paul Joyce; Lisette P Waits
Journal:  Genetics       Date:  2002-01       Impact factor: 4.562

2.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

3.  Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows.

Authors:  Laurent Excoffier; Heidi E L Lischer
Journal:  Mol Ecol Resour       Date:  2010-03-01       Impact factor: 7.090

Review 4.  Biodiversity in cities needs space: a meta-analysis of factors determining intra-urban biodiversity variation.

Authors:  Joscha Beninde; Michael Veith; Axel Hochkirch
Journal:  Ecol Lett       Date:  2015-04-10       Impact factor: 9.492

5.  Microevolution of sympatry: landscape genetics of hedgehogs Erinaceus europaeus and E. roumanicus in Central Europe.

Authors:  B Bolfíková; P Hulva
Journal:  Heredity (Edinb)       Date:  2011-08-24       Impact factor: 3.821

6.  Inferring weak population structure with the assistance of sample group information.

Authors:  Melissa J Hubisz; Daniel Falush; Matthew Stephens; Jonathan K Pritchard
Journal:  Mol Ecol Resour       Date:  2009-04-01       Impact factor: 7.090

7.  Categorizing wildlife responses to urbanization and conservation implications of terminology.

Authors:  Jason D Fischer; Sarah C Schneider; Adam A Ahlers; James R Miller
Journal:  Conserv Biol       Date:  2015-01-07       Impact factor: 6.560

8.  Degree of landscape fragmentation influences genetic isolation among populations of a gliding mammal.

Authors:  Andrea C Taylor; Faith M Walker; Ross L Goldingay; Tina Ball; Rodney van der Ree
Journal:  PLoS One       Date:  2011-10-28       Impact factor: 3.240

9.  Urban park characteristics, genetic variation, and historical demography of white-footed mouse (Peromyscus leucopus) populations in New York City.

Authors:  Jason Munshi-South; Christopher Nagy
Journal:  PeerJ       Date:  2014-03-13       Impact factor: 2.984

10.  Decline in Distribution and Abundance: Urban Hedgehogs under Pressure.

Authors:  Anouk L Taucher; Sandra Gloor; Adrian Dietrich; Madeleine Geiger; Daniel Hegglin; Fabio Bontadina
Journal:  Animals (Basel)       Date:  2020-09-09       Impact factor: 3.231

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