Literature DB >> 33290612

Dynamic Stereoselection of Peptide Helicates and Their Selective Labeling of DNA Replication Foci in Cells*.

Jacobo Gómez-González1, Yolanda Pérez2, Giuseppe Sciortino3,4, Lorena Roldan-Martín3, José Martínez-Costas5, Jean-Didier Maréchal3, Ignacio Alfonso6, Miguel Vázquez López7, M Eugenio Vázquez1.   

Abstract

Although largely overlooked in peptide engineering, coordination chemistry offers a new set of interactions that opens unexplored design opportunities for developing complex molecular structures. In this context, we report new artificial peptide ligands that fold into chiral helicates in the presence of labile metal ions such as FeII and CoII . Heterochiral β-turn-promoting sequences encode the stereoselective folding of the peptide ligands and define the physicochemical properties of their corresponding metal complexes. Circular dichroism and NMR spectroscopy in combination with computational methods allowed us to identify and determine the structure of two isochiral ΛΛ-helicates, folded as topological isomers. Finally, in addition to the in-vitro characterization of their selective binding to DNA three-way junctions, cell-microscopy experiments demonstrated that a rhodamine-labeled FeII helicate was internalized and selectively stains DNA replication factories in functional cells.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  DNA recognition; coordination chemistry; metallopeptides; peptide design; supramolecular chemistry

Mesh:

Substances:

Year:  2021        PMID: 33290612      PMCID: PMC8016737          DOI: 10.1002/anie.202013039

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  76 in total

1.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  Optically pure, water-stable metallo-helical 'flexicate' assemblies with antibiotic activity.

Authors:  Suzanne E Howson; Albert Bolhuis; Viktor Brabec; Guy J Clarkson; Jaroslav Malina; Alison Rodger; Peter Scott
Journal:  Nat Chem       Date:  2011-11-27       Impact factor: 24.427

Review 3.  Artificial molecular double-stranded helices.

Authors:  Markus Albrecht
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-14       Impact factor: 15.336

4.  Thermodynamics of oligoarginines binding to RNA and DNA.

Authors:  D P Mascotti; T M Lohman
Journal:  Biochemistry       Date:  1997-06-10       Impact factor: 3.162

5.  De novo design of covalently constrained mesosize protein scaffolds with unique tertiary structures.

Authors:  Bobo Dang; Haifan Wu; Vikram Khipple Mulligan; Marco Mravic; Yibing Wu; Thomas Lemmin; Alexander Ford; Daniel-Adriano Silva; David Baker; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-25       Impact factor: 11.205

6.  A comparison of DNA compaction by arginine and lysine peptides: a physical basis for arginine rich protamines.

Authors:  Jason DeRouchey; Brandon Hoover; Donald C Rau
Journal:  Biochemistry       Date:  2013-04-18       Impact factor: 3.162

7.  Solid-phase peptide synthesis: from standard procedures to the synthesis of difficult sequences.

Authors:  Irene Coin; Michael Beyermann; Michael Bienert
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

8.  Interaction of digitonin and its analogs with membrane cholesterol.

Authors:  M Nishikawa; S Nojima; T Akiyama; U Sankawa; K Inoue
Journal:  J Biochem       Date:  1984-10       Impact factor: 3.387

9.  Dynamics of plant DNA replication based on PCNA visualization.

Authors:  Ryohei Yokoyama; Takeshi Hirakawa; Seri Hayashi; Takuya Sakamoto; Sachihiro Matsunaga
Journal:  Sci Rep       Date:  2016-07-15       Impact factor: 4.379

10.  Stereochemistry and amyloid inhibition: Asymmetric triplex metallohelices enantioselectively bind to Aβ peptide.

Authors:  Yijia Guan; Zhi Du; Nan Gao; Yue Cao; Xiaohui Wang; Peter Scott; Hualong Song; Jinsong Ren; Xiaogang Qu
Journal:  Sci Adv       Date:  2018-01-19       Impact factor: 14.136

View more
  5 in total

1.  Supramolecular Cylinders Target Bulge Structures in the 5' UTR of the RNA Genome of SARS-CoV-2 and Inhibit Viral Replication*.

Authors:  Lazaros Melidis; Harriet J Hill; Nicholas J Coltman; Scott P Davies; Kinga Winczura; Tasha Chauhan; James S Craig; Aditya Garai; Catherine A J Hooper; Ross T Egan; Jane A McKeating; Nikolas J Hodges; Zania Stamataki; Pawel Grzechnik; Michael J Hannon
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-09       Impact factor: 16.823

2.  Dual targeting of higher-order DNA structures by azacryptands induces DNA junction-mediated DNA damage in cancer cells.

Authors:  Joanna Zell; Katerina Duskova; Leïla Chouh; Madeleine Bossaert; Nicolas Chéron; Anton Granzhan; Sébastien Britton; David Monchaud
Journal:  Nucleic Acids Res       Date:  2021-10-11       Impact factor: 16.971

3.  Guest Molecule-Mediated Energy Harvesting in a Conformationally Sensitive Peptide-Metal Organic Framework.

Authors:  Yu Chen; Sarah Guerin; Hui Yuan; Joseph O'Donnell; Bin Xue; Pierre-Andre Cazade; Ehtsham Ul Haq; Linda J W Shimon; Sigal Rencus-Lazar; Syed A M Tofail; Yi Cao; Damien Thompson; Rusen Yang; Ehud Gazit
Journal:  J Am Chem Soc       Date:  2022-01-24       Impact factor: 15.419

4.  Cavity-Containing [Fe2L3]4+ Helicates: An Examination of Host-Guest Chemistry and Cytotoxicity.

Authors:  Lynn S Lisboa; Mie Riisom; Roan A S Vasdev; Stephen M F Jamieson; L James Wright; Christian G Hartinger; James D Crowley
Journal:  Front Chem       Date:  2021-07-07       Impact factor: 5.221

5.  Stereoselective Self-Assembly of DNA Binding Helicates Directed by the Viral β-Annulus Trimeric Peptide Motif.

Authors:  Jacobo Gómez-González; David Bouzada; Lidia A Pérez-Márquez; Giuseppe Sciortino; Jean-Didier Maréchal; Miguel Vázquez López; M Eugenio Vázquez
Journal:  Bioconjug Chem       Date:  2021-07-28       Impact factor: 4.774

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.