Literature DB >> 33288723

Mesyl phosphoramidate backbone modified antisense oligonucleotides targeting miR-21 with enhanced in vivo therapeutic potency.

Olga A Patutina1, Svetlana K Gaponova Miroshnichenko1, Aleksandra V Sen'kova1, Innokenty A Savin1, Daniil V Gladkikh1, Ekaterine A Burakova2,3, Alesya A Fokina2,3, Mikhail A Maslov4, Elena V Shmendel'4, Mattew J A Wood5, Valentin V Vlassov1, Sidney Altman6,7, Dmitry A Stetsenko2,3, Marina A Zenkova8.   

Abstract

The design of modified oligonucleotides that combine in one molecule several therapeutically beneficial properties still poses a major challenge. Recently a new type of modified mesyl phosphoramidate (or µ-) oligonucleotide was described that demonstrates high affinity to RNA, exceptional nuclease resistance, efficient recruitment of RNase H, and potent inhibition of key carcinogenesis processes in vitro. Herein, using a xenograft mouse tumor model, it was demonstrated that microRNA miR-21-targeted µ-oligonucleotides administered in complex with folate-containing liposomes dramatically inhibit primary tumor growth via long-term down-regulation of miR-21 in tumors and increase in biosynthesis of miR-21-regulated tumor suppressor proteins. This antitumoral effect is superior to the effect of the corresponding phosphorothioate. Peritumoral administration of µ-oligonucleotide results in its rapid distribution and efficient accumulation in the tumor. Blood biochemistry and morphometric studies of internal organs revealed no pronounced toxicity of µ-oligonucleotides. This new oligonucleotide class provides a powerful tool for antisense technology.

Entities:  

Keywords:  DNA modification; antisense oligonucleotide; mesyl oligonucleotide; oncogenic microRNA; phosphorothioate

Mesh:

Substances:

Year:  2020        PMID: 33288723      PMCID: PMC7768764          DOI: 10.1073/pnas.2016158117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  47 in total

Review 1.  Cellular uptake and trafficking of antisense oligonucleotides.

Authors:  Stanley T Crooke; Shiyu Wang; Timothy A Vickers; Wen Shen; Xue-Hai Liang
Journal:  Nat Biotechnol       Date:  2017-02-27       Impact factor: 54.908

Review 2.  MicroRNA-21: a ubiquitously expressed pro-survival factor in cancer and other diseases.

Authors:  Si Li; Zhu Liang; Liu Xu; Fangdong Zou
Journal:  Mol Cell Biochem       Date:  2011-09-11       Impact factor: 3.396

Review 3.  Cellular uptake and intracellular trafficking of oligonucleotides.

Authors:  R L Juliano; K Carver
Journal:  Adv Drug Deliv Rev       Date:  2015-04-14       Impact factor: 15.470

Review 4.  The Role of miR-21 in Cancer.

Authors:  Susan R Pfeffer; Chuan He Yang; Lawrence M Pfeffer
Journal:  Drug Dev Res       Date:  2015-06-16       Impact factor: 4.360

5.  The IGF-I/JAK2-STAT3/miR-21 signaling pathway may be associated with human renal cell carcinoma cell growth.

Authors:  Ying Su; An Zhao; Guoping Cheng; Jingjing Xu; Enming Ji; Wenyong Sun
Journal:  Cancer Biomark       Date:  2017-07-04       Impact factor: 4.388

Review 6.  Dissecting the functional role of microRNA 21 in osteosarcoma.

Authors:  Durairaj Sekar; Panagal Mani; M Biruntha; P Sivagurunathan; M Karthigeyan
Journal:  Cancer Gene Ther       Date:  2019-03-25       Impact factor: 5.854

7.  Antisense oligonucleotides containing locked nucleic acid improve potency but cause significant hepatotoxicity in animals.

Authors:  Eric E Swayze; Andrew M Siwkowski; Edward V Wancewicz; Michael T Migawa; Tadeusz K Wyrzykiewicz; Gene Hung; Brett P Monia; C Frank Bennett
Journal:  Nucleic Acids Res       Date:  2006-12-19       Impact factor: 16.971

8.  Site-specific replacement of phosphorothioate with alkyl phosphonate linkages enhances the therapeutic profile of gapmer ASOs by modulating interactions with cellular proteins.

Authors:  Michael T Migawa; Wen Shen; W Brad Wan; Guillermo Vasquez; Michael E Oestergaard; Audrey Low; Cheryl L De Hoyos; Ruchi Gupta; Susan Murray; Michael Tanowitz; Melanie Bell; Joshua G Nichols; Hans Gaus; Xue-Hai Liang; Eric E Swayze; Stanley T Crooke; Punit P Seth
Journal:  Nucleic Acids Res       Date:  2019-06-20       Impact factor: 16.971

9.  In silico and in vitro evaluation of exonic and intronic off-target effects form a critical element of therapeutic ASO gapmer optimization.

Authors:  Piotr J Kamola; Jeremy D A Kitson; Gemma Turner; Klio Maratou; Sofie Eriksson; Aliza Panjwani; Linda C Warnock; Gaelle A Douillard Guilloux; Kitty Moores; Emma L Koppe; William E Wixted; Paul A Wilson; Nigel J Gooderham; Timothy W Gant; Kenneth L Clark; Stephen A Hughes; Mark R Edbrooke; Joel D Parry
Journal:  Nucleic Acids Res       Date:  2015-09-03       Impact factor: 16.971

Review 10.  Chemistry, mechanism and clinical status of antisense oligonucleotides and duplex RNAs.

Authors:  Xiulong Shen; David R Corey
Journal:  Nucleic Acids Res       Date:  2018-02-28       Impact factor: 16.971

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  5 in total

1.  "Bind, cleave and leave": multiple turnover catalysis of RNA cleavage by bulge-loop inducing supramolecular conjugates.

Authors:  Bahareh Amirloo; Yaroslav Staroseletz; Sameen Yousaf; David J Clarke; Tom Brown; Harmesh Aojula; Marina A Zenkova; Elena V Bichenkova
Journal:  Nucleic Acids Res       Date:  2022-01-25       Impact factor: 16.971

2.  Antisense oligonucleotide gapmers containing phosphoryl guanidine groups reverse MDR1-mediated multiple drug resistance of tumor cells.

Authors:  Maxim S Kupryushkin; Anton V Filatov; Nadezhda L Mironova; Olga A Patutina; Ivan V Chernikov; Elena L Chernolovskaya; Marina A Zenkova; Dmitrii V Pyshnyi; Dmitry A Stetsenko; Sidney Altman; Valentin V Vlassov
Journal:  Mol Ther Nucleic Acids       Date:  2021-11-29       Impact factor: 8.886

3.  Bulge-Forming miRNases Cleave Oncogenic miRNAs at the Central Loop Region in a Sequence-Specific Manner.

Authors:  Olga Patutina; Daria Chiglintseva; Bahareh Amirloo; David Clarke; Svetlana Gaponova; Valentin Vlassov; Elena Bichenkova; Marina Zenkova
Journal:  Int J Mol Sci       Date:  2022-06-12       Impact factor: 6.208

4.  Conjugation of chemical handles and functional moieties to DNA during solid phase synthesis with sulfonyl azides.

Authors:  Angel Santorelli; Kurt V Gothelf
Journal:  Nucleic Acids Res       Date:  2022-07-22       Impact factor: 19.160

Review 5.  Towards Personalized Allele-Specific Antisense Oligonucleotide Therapies for Toxic Gain-of-Function Neurodegenerative Diseases.

Authors:  Jacob Helm; Ludger Schöls; Stefan Hauser
Journal:  Pharmaceutics       Date:  2022-08-16       Impact factor: 6.525

  5 in total

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