| Literature DB >> 33287537 |
Natalia B Pigni1,2, Kevin L Clark1, Warren F Beck3, José A Gascón1.
Abstract
The orange carotenoid protein (OCP) is involved in the photoprotective processes in cyanobacteria via nonphotochemical quenching. Triggered by blue-green light absorption, the carotenoid chromophore undergoes translocation, displacing around 12 Å from the C-terminal domain (CTD) to the N-terminal domain (NTD). The detailed molecular rearrangements that occur within the carotenoid and the protein during this process remain largely elusive. By using a combination of molecular dynamics, well-tempered metadynamics, and hybrid quantum mechanical/molecular mechanical (QM/MM) calculations, we were able to mimic the translocation of the carotenoid from the inactive OCPO and obtain metastable red-shifted states in the photoactivation mechanism, replicating the λmax values of reference experimental spectra. In addition, our simulations give insight into the structure of the red-shifted form of the inactive state of OCP.Entities:
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Year: 2020 PMID: 33287537 DOI: 10.1021/acs.jpcb.0c08756
Source DB: PubMed Journal: J Phys Chem B ISSN: 1520-5207 Impact factor: 2.991