Literature DB >> 33285342

Protein-complex stability in cells and in vitro under crowded conditions.

Samantha S Stadmiller1, Gary J Pielak2.   

Abstract

Biology is beginning to appreciate the effects of the crowded and complex intracellular environment on the equilibrium thermodynamics and kinetics of protein folding. The next logical step involves the interactions between proteins. We review quantitative, wet-experiment based efforts aimed at understanding how and why high concentrations of small molecules, synthetic polymers, biologically relevant cosolutes and the interior of living cells affect the energetics of protein-protein interactions. We then address popular theories used to explain the effects and suggest expeditious paths for a more methodical integration of experiment and simulation.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Year:  2020        PMID: 33285342     DOI: 10.1016/j.sbi.2020.10.024

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  7 in total

1.  The intracellular environment affects protein-protein interactions.

Authors:  Shannon L Speer; Wenwen Zheng; Xin Jiang; I-Te Chu; Alex J Guseman; Maili Liu; Gary J Pielak; Conggang Li
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

2.  Hydration-mediated G-protein-coupled receptor activation.

Authors:  Steven D E Fried; Kushani S K Hewage; Anna R Eitel; Andrey V Struts; Nipuna Weerasinghe; Suchithranga M D C Perera; Michael F Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-18       Impact factor: 12.779

Review 3.  Progress on Crowding Effect in Cell-like Structures.

Authors:  Chao Li; Xiangxiang Zhang; Mingdong Dong; Xiaojun Han
Journal:  Membranes (Basel)       Date:  2022-06-03

4.  Quantification of Entropic Excluded Volume Effects Driving Crowding-Induced Collapse and Folding of a Disordered Protein.

Authors:  Divya Rajendran; Shrutarshi Mitra; Hiroyuki Oikawa; Kulkarni Madhurima; Ashok Sekhar; Satoshi Takahashi; Athi N Naganathan
Journal:  J Phys Chem Lett       Date:  2022-03-31       Impact factor: 6.888

5.  Preferential Interactions of a Crowder Protein with the Specific Binding Site of a Native Protein Complex.

Authors:  Xu Dong; Ling-Yun Qin; Zhou Gong; Sanbo Qin; Huan-Xiang Zhou; Chun Tang
Journal:  J Phys Chem Lett       Date:  2022-01-19       Impact factor: 6.475

6.  Label-Free Single-Molecule Pulldown for the Detection of Released Cellular Protein Complexes.

Authors:  Guangzhong Ma; Pengfei Zhang; Xinyu Zhou; Zijian Wan; Shaopeng Wang
Journal:  ACS Cent Sci       Date:  2022-08-18       Impact factor: 18.728

7.  Crowding Effects on the Structure and Dynamics of the Intrinsically Disordered Nuclear Chromatin Protein NUPR1.

Authors:  Alessio Bonucci; Martina Palomino-Schätzlein; Paula Malo de Molina; Arantxa Arbe; Roberta Pierattelli; Bruno Rizzuti; Juan L Iovanna; José L Neira
Journal:  Front Mol Biosci       Date:  2021-07-05
  7 in total

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