| Literature DB >> 33282346 |
Yuan Liu1, Ning Ding2, Shixiang Zhou3, Chen Chen1, Shan Huang1, Yanling Lv4, Damin Jiao5, Yishan Zheng6, Zhiliang Hu1, Chuanjun Xu7, Wei Chen8, Hui Dai9, Wenkui Sun2, Cong Cheng1, Ru Lv1, Jian Cheng1, Zi Ye1, Zhengjie Li1, Yongxiang Yi10, Hongxia Wei1.
Abstract
BACKGROUND: The epidemiological and clinical characteristics of patients with coronavirus disease 2019 (COVID-19) have been reported. However, the prevalence of retesting positive by RT-PCR for the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and the associated patient characteristics, remain unclear.Entities:
Keywords: Coronavirus disease 2019 (COVID-19); re-positive; severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
Year: 2020 PMID: 33282346 PMCID: PMC7711384 DOI: 10.21037/jtd.2020.04.17
Source DB: PubMed Journal: J Thorac Dis ISSN: 2072-1439 Impact factor: 3.005
Demographics and baseline characteristics
| All patients (n=90) | Retested RT-PCR, | Retested RT-PCR, | P value | |
|---|---|---|---|---|
| Age, years | 49 (33–60) | 49 (34–61) | 40 (20–59) | 0.286 |
| Sex, male, n (%) | 49 (54.4) | 45 (56.3) | 4 (40) | 0.503 |
| Weight (kg) | 64 (55–72.8) | 65 (58–75) | 54 (42.3–60.5) | 0.003 |
| Respiratory rate (bpm) | 20 (19–21) | 20 (19–21) | 20 (19–21) | 0.958 |
| SpO2 at admission (%) | 98 (97–99) | 98 (97–99) | 98 (98–99) | 0.092 |
| Heart rate at admission (bpm) | 94 (82–102) | 94 (83–103) | 87 (79–94) | 0.115 |
| SBP at admission (mmHg) | 129 (119–136) | 129 (120–137) | 125 (117–131) | 0.342 |
| DBP at admission (mmHg) | 83 (75–89) | 82 (75–90) | 85 (75–89) | 0.893 |
| Smoking, n (%) | 7 (7.8) | 6 (7.8) | 1 (10) | 0.588 |
| Basic diseases | ||||
| Respiratory system disease, n (%) | 17 (18.9) | 17 (21.3) | 0 | 0.680 |
| Cardiovascular and cerebrovascular diseases, n (%) | 14 (15.6) | 14 (17.5) | 0 | 0.351 |
| Digestive system disease, n (%) | 8 (8.9) | 7 (8.8) | 1 (10) | 1 |
| Diabetes, n (%) | 5 (5.6) | 5 (6.3) | 0 | 1 |
| Malignant tumour, n (%) | 3 (3.3) | 3 (3.8) | 0 | 1 |
| Nervous system disease, n (%) | 8 (8.9) | 7 (8.8) | 1 (10) | 1 |
| Hematological system disease, n (%) | 2 (2.2) | 1 (1.3) | 1 (10) | 0.211 |
| Surgery history, n (%) | 16 (17.8) | 15 (18.8) | 1 (10) | 0.684 |
| Incubation period (days) | 7 (4–12) | 7 (4–12) | 7 (6–13) | 0.410 |
| Maximum body temperature (°C) | 38.2 (37.8–38.9) | 38.2 (37.8–38.9) | 38 (37.7–38.8) | 0.657 |
| Cycle threshold of RNAaemia | 30 (26–34) | 30 (26–34) | 32 (26–34) | 0.846 |
| Duration of RT-PCR positive (days) | 10 (5–13) | 10 (5–14) | 10 (4–12) | 0.714 |
Data given as median (interquartile range, IQR) or percent of patients. Wilcoxon tests (continuous variables) and Fisher exact tests (categorical variables) were used to compare between retested RT-PCR positive and negative. SpO2, saturation of pulse oxygen; SBP, systolic blood pressure; DBP, diastolic blood pressure.
Signs and symptoms pre- and post-admission
| All patients (n=90) | Retested RT-PCR, | Retested RT-PCR, | P value | |
|---|---|---|---|---|
| Signs and symptoms pre-admission, n (%) | ||||
| Fever | 66 (73.3) | 62 (77.5) | 4 (40) | 0.020 |
| Dry cough | 34 (37.8) | 31 (38.8) | 3 (30) | 0.737 |
| Cough and expectoration, n (%) | 18 (20.0) | 15 (18.8) | 3 (30) | 0.412 |
| Shortness of breath | 17 (18.9) | 16 (20.0) | 1 (10) | 0.680 |
| Headache | 7 (7.8) | 6 (7.5) | 1 (10) | 0.575 |
| Sore throat | 8 (8.9) | 7 (8.8) | 1 (10) | 1 |
| Rhinorrhoea | 12 (13.3) | 11 (13.8) | 1 (10) | 1 |
| Stuffy nose | 6 (6.7) | 6 (7.5) | 0 | 1 |
| Chest pain | 3 (3.3) | 2 (2.5) | 1 (10) | 0.301 |
| Weak | 18 (20.0) | 18 (22.5) | 0 | 0.202 |
| Dizzy | 2 (2.2) | 2 (2.5) | 0 | 1 |
| Muscle ache | 15 (16.7) | 15 (18.8) | 0 | 0.203 |
| Nausea and vomiting | 4 (4.4) | 4 (5.0) | 0 | 1 |
| Poor food intake | 5 (5.6) | 5 (6.3) | 0 | 1 |
| Back and low back pain | 3 (3.3) | 3 (3.8) | 0 | 1 |
| Abdominal pain and diarrhea, n (%) | 8 (8.9) | 7 (8.8) | 1 (10) | 1 |
| New onset signs and symptoms post-admission, n (%) | ||||
| Fever | 8 (8.9) | 5 (6.3) | 3 (30) | 0.042 |
| Cough | 15 (16.7) | 14 (17.5) | 1 (10) | 1 |
| Shortness of breath | 18 (20.0) | 16 (20.0) | 2 (20) | 1 |
| Headache | 3 (3.3) | 3 (3.8) | 0 | 1 |
| Chest pain | 1 (1.1) | 1 (1.3) | 0 | 1 |
| Weak | 9 (10.0) | 9 (11.3) | 0 | 0.59 |
| Dizzy | 7 (7.8) | 6 (7.5) | 1 (10) | 0.575 |
| Muscle ache | 1 (1.1) | 1 (1.3) | 0 | 1 |
| Abdominal pain and diarrhea, n (%) | 36 (40.0) | 34 (42.5) | 2 (20) | 0.305 |
| Nausea and vomiting | 20 (22.2) | 18 (22.2) | 2 (20) | 1 |
| Poor food intake | 11 (12.2) | 10 (12.5) | 1 (10) | 1 |
| Rashes | 10 (11.1) | 10 (12.5) | 0 | |
| Abdominal distension | 4 (4.4) | 4 (5.0) | 0 | 1 |
| Abnormal liver function, n (%) | 7 (7.8) | 7 (8.8) | 0 | 1 |
| Palpitate | 3 (3.3) | 2 (2.5) | 1 (10) | 0.301 |
| Insomnia | 4 (4.4) | 4 (5.0) | 0 | 1 |
| Night sweats | 3 (3.3) | 3 (3.8) | 0 | 1 |
| Chest CT show bilateral pneumonia, n (%) | 59 (65.6) | 57 (71.3) | 2 (20) | 0.003 |
Data given as percent of patients. Fisher exact tests were used to compare between retested RT-PCR positive and negative.
Treatment of patients with COVID-19
| Treatment | All patients (n=90) | Retested RT-PCR, | Retested RT-PCR, | P value |
|---|---|---|---|---|
| Antibiotic, n (%) | 25 (27.8) | 24 (30.0) | 1 (12.5) | 0.431 |
| Glucocorticoids, n (%) | 33 (36.7) | 31 (38.8) | 2 (25.0) | 0.705 |
| Immunoglobulin, n (%) | 44 (48.9) | 41 (51.3) | 3 (37.5) | 0.713 |
| Albumin, n (%) | 12 (13.3) | 12 (15.0) | 0 | 0.592 |
| Thymosin, n (%) | 14 (15.6) | 14 (17.5) | 0 | 0.346 |
| Anti-virus, n (%) | ||||
| Arbidol hydrochloride | 43 (47.8) | 41 (51.3) | 2 (25.0) | 0.267 |
| Lopinavir/ritonavir | 70 (77.8) | 63 (78.8) | 7 (87.5) | 1 |
| Darunavir/cobicistat | 31 (34.4) | 28 (35.0) | 3 (37.5) | 1 |
| Ribavirin | 8 (8.9) | 7 (8.8) | 1 (12.5) | 0.549 |
| Interferon | 84 (93.3) | 76 (95.0) | 8 (80.0) | 1 |
Data given as percent of patients. Fisher exact tests were used to compare between retested RT-PCR positive and negative. COVID-19, coronavirus disease 2019; RT-PCR, real-time reverse-transcriptase-polymerasechain-reaction.
Laboratory findings of patients with COVID-19
| Laboratory findings | All patients (n=90) | Retested RT-PCR, | Retested RT-PCR, | P value |
|---|---|---|---|---|
| PaO2/FiO2 ratio | 452.4 (357.5-527.0) | 438.1 (357.1–530.1) | 495.2 (454.8–552.4) | 0.271 |
| Arterial pH | 7.41 (7.38–7.43) | 7.42 (7.38–7.43) | 7.39 (7.36–7.42) | 0.211 |
| PaCO2 (mmHg) | 38 (36–42) | 38 (36–43) | 35 (32–43) | 0.307 |
| PaO2 (mmHg) | 103 (86–118) | 102 (84–119) | 104 (96–116) | 0.605 |
| Arterial Lactic acid (mmol/L) | 1.31 (0.94–1.75) | 1.26 (0.91–1.64) | 1.73 (1.09–2.96) | 0.238 |
| Hs-CRP (mg/L) | 8.6 (1.6–20) | 10.0 (2.5–20) | 2.2 (0.8–4.3) | 0.003 |
| WBC (109/L) | 4.36 (3.6–5.26) | 4.3 (3.44–5.19) | 4.73 (4.08–7.22) | 0.050 |
| Absolute value of neutrophils (109/L) | 2.61 (1.90–3.14) | 2.53 (1.88–3.15) | 2.64 (2.19–3.28) | 0.663 |
| Absolute value of Lymphocyte (109/L) | 1.25 (0.95–1.67) | 1.24 (0.94–1.6) | 1.5 (0.93–2.46) | 0.363 |
| Hemoglobin (mg/L) | 132 (121–144) | 133 (121–145) | 124 (115–146) | 0.370 |
| Platelet count (109/L) | 181 (150–217) | 180 (146–215) | 199 (165–312) | 0.140 |
| Albumin (g/L) | 44.0 (41.6–46.0) | 44.0 (41.2–46.3) | 44.1 (42.2–45.2) | 0.908 |
| Total bilirubin (umol/L) | 10.6 (8.0–14.2) | 10.8 (8.5–14.8) | 8.2 (5.7–11.3) | 0.063 |
| AST (IU/L) | 21.9 (18.4–33.2) | 21.9 (18.4–35.1) | 21.8 (16.5–27.3) | 0.555 |
| ALT (U/L) | 20.5 (13.9–31.0) | 20.6 (14.3–31.1) | 15.5 (11.9–30.7) | 0.304 |
| BUN (mmol/L) | 3.4 (2.6–4.1) | 3.4 (2.7–4.1) | 3.3 (2.3–4.1) | 0.599 |
| Creatinine (μmol/L) | 60 (47–70) | 61.5 (48–70) | 49 (41–63) | 0.135 |
| Venous blood Lactic acid (mmol/L) | 2.9 (2.6–3.2) | 2.9 (2.6–3.2) | 2.7 (2.0–3.1) | 0.169 |
| Adenosine deaminase (U/L) | 7 (6–9) | 7 (6–9) | 6.5 (4–8.5) | 0.191 |
| Creatine phosphokinase (U/L) | 62 (44–107) | 57 (42–101.5) | 94.5 (74–161.3) | 0.009 |
| CK-MB (ng/mL) | 1.3 (1.3–3.1) | 1.3 (1.3–3.0) | 1.9 (1.3–3.6) | 0.602 |
| Myoglobin (ng/mL) | 15 (15–41) | 15 (15–41) | 15 (15–40) | 0.892 |
| Troponin I (ng/mL) | 0.05 (0.02–0.1) | 0.05 (0.02–0.1) | 0.05 (0.01–0.14) | 0.984 |
| Lactate dehydrogenase (IU/L) | 203.5 (159.3–259.5) | 208.5 (157–264) | 189 (160–239) | 0.571 |
| Prothrombin time (s) | 12.1 (11.5–13.3) | 12.2 (11.5–13.3) | 11.9 (11.4–12.6) | 0.367 |
| D-dimer (mg/L) | 0.22 (0.14–0.36) | 0.23 (0.15–0.36) | 0.19 (0.08–0.56) | 0.747 |
| Fibrinogen degradation products (μg/mL) | 2.95 (1.5–6.18) | 3.11 (1.51–6.31) | 2.02 (0.89–4.28) | 0.174 |
| IL-6 (pg/mL) | 0.01 (0.01–0.03) | 0.01 (0.01–0.03) | 0 (0–0.01) | 0.014 |
| ESR (mm/H) | 16 (6–28) | 18 (7–32) | 6 (4–12) | 0.013 |
| PCT (ng/mL) | 1.2 (0.02–1.82) | 1.1 (0.02–1.83) | 1.3 (0.14–2.15) | 0.969 |
| Percentage of total CD3+ T cells (%) | 68.5 (59.1–78.0) | 68.5 (59.0–78.1) | 68.5 (58.1–74.9) | 0.778 |
| CD4+/CD45+ | 37 (29–41.8) | 37 (30–42) | 29 (26.5–37.5) | 0.121 |
| CD4+ T cells (/μL) | 497 (363–713) | 493 (363–713) | 520 (289–717) | 0.896 |
| CD45 cells (/μL) | 1,390 (996–1,837) | 1,397 (984–1,803) | 1,358 (1,027–2,347) | 0.588 |
| TH/TS | 1.50 (0.98–2.03) | 1.51 (0.99–2.04) | 1.31 (0.68–2.06) | 0.358 |
| Percentage of CD16/56+NK cells (%) | 15.14 (9.32–27.87) | 14.96 (9.3–28.05) | 16.85 (8.82–30.63) | 0.849 |
| CD16/56+NK (/μL) | 195 (136–371) | 192.5 (131–396) | 251 (140–319) | 0.747 |
| CD19+B (/μL) | 151 (107–211) | 149 (107–204) | 192 (118–230) | 0.334 |
Data given as median (interquartile range) of patients. Wilcoxon tests were used to compare between retested RT-PCR positive and negative. COVID-19, coronavirus disease 2019; PaO2, partial pressure of oxygen; FiO2, fraction of inspiration oxygen; pH, hydrogen ion concentration; PaCO2, partial pressure of carbon dioxide; hs-CRP, hypersensitive c-reactive protein; WBC, white blood cells; ALT, alanine aminotransferase; AST, aspartate aminotransferase; BUN, blood urea nitrogen; CK-MB, Creatine Kinase; IL-6, interleukin-6; ESR, erythrocyte sediment rate; PCT, procalcitonin; CD, cluster differentiation; TH, helper T; TS, suppressor T.
Risk factors for re-positive
| Adjusted β | P value | 95% confidence interval | ||
|---|---|---|---|---|
| Lower | Upper | |||
| Hs-CRP | 0.8 | 0.049 | 0.640 | 0.999 |
| WBC | 1.96 | 0.025 | 1.088 | 3.528 |
A binary logistic regression model (backward) was used to select the independent predictors of re-positive from eight key clinical parameters (pre-admission fever, post-admission fever, bilateral lung infection, hs-CRP, WBC, creatine phosphokinase, IL-6 and ESR). Abbreviations are defined in .
Figure 1ROC curves for predictive models of RT-PCR re-positive testing based on hs-CRP + WBC together (A) and calibration curve for the hs-CRP + WBC model (B). ROC, receiver operator characteristic; AUC, area under the ROC curve; hs-CRP, hypersensitive c-reactive protein; WBC, white blood cells. RT-PCR, real-time reverse-transcriptase-polymerasechain-reaction.