Literature DB >> 33280123

Reversing extinction trends: new uses of (old) herbarium specimens to accelerate conservation action on threatened species.

Giulia Albani Rocchetti1, Chelsey Geralda Armstrong2, Thomas Abeli3, Simone Orsenigo4, Caroline Jasper5, Simon Joly6,7, Anne Bruneau7, Maria Zytaruk8, Jana C Vamosi5.   

Abstract

Although often not collected specifically for the purposes of conservation, herbarium specimens offer sufficient information to reconstruct parameters that are needed to designate a species as 'at-risk' of extinction. While such designations should prompt quick and efficient legal action towards species recovery, such action often lags far behind and is mired in bureaucratic procedure. The increase in online digitization of natural history collections has now led to a surge in the number new studies on the uses of machine learning. These repositories of species occurrences are now equipped with advances that allow for the identification of rare species. The increase in attention devoted to estimating the scope and severity of the threats that lead to the decline of such species will increase our ability to mitigate these threats and reverse the declines, overcoming a current barrier to the recovery of many threatened plant species. Thus far, collected specimens have been used to fill gaps in systematics, range extent, and past genetic diversity. We find that they also offer material with which it is possible to foster species recovery, ecosystem restoration, and de-extinction, and these elements should be used in conjunction with machine learning and citizen science initiatives to mobilize as large a force as possible to counter current extinction trends.
© 2020 The Authors. New Phytologist © 2020 New Phytologist Foundation.

Keywords:  anthropogenic threats; ex situ conservation; in situ conservation; machine learning; range size; species at risk; species recovery

Mesh:

Year:  2021        PMID: 33280123     DOI: 10.1111/nph.17133

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  3 in total

1.  Tracking population genetic signatures of local extinction with herbarium specimens.

Authors:  Christoph Rosche; Annett Baasch; Karen Runge; Philipp Brade; Sabrina Träger; Christian Parisod; Isabell Hensen
Journal:  Ann Bot       Date:  2022-07-18       Impact factor: 5.040

Review 2.  Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes.

Authors:  Lotus A Lofgren; Jason E Stajich
Journal:  Curr Biol       Date:  2021-10-11       Impact factor: 10.900

3.  The Herbarium 2021 Half-Earth Challenge Dataset and Machine Learning Competition.

Authors:  Riccardo de Lutio; John Y Park; Kimberly A Watson; Stefano D'Aronco; Jan D Wegner; Jan J Wieringa; Melissa Tulig; Richard L Pyle; Timothy J Gallaher; Gillian Brown; Gordon Guymer; Andrew Franks; Dhahara Ranatunga; Yumiko Baba; Serge J Belongie; Fabián A Michelangeli; Barbara A Ambrose; Damon P Little
Journal:  Front Plant Sci       Date:  2022-02-01       Impact factor: 5.753

  3 in total

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