Literature DB >> 33273072

Selection enhances protein evolvability by increasing mutational robustness and foldability.

Jia Zheng1,2, Ning Guo3, Andreas Wagner4,2,5.   

Abstract

Natural selection can promote or hinder a population's evolvability-the ability to evolve new and adaptive phenotypes-but the underlying mechanisms are poorly understood. To examine how the strength of selection affects evolvability, we subjected populations of yellow fluorescent protein to directed evolution under different selection regimes and then evolved them toward the new phenotype of green fluorescence. Populations under strong selection for the yellow phenotype evolved the green phenotype most rapidly. They did so by accumulating mutations that increase both robustness to mutations and foldability. Under weak selection, neofunctionalizing mutations rose to higher frequency at first, but more frequent deleterious mutations undermined their eventual success. Our experiments show how selection can enhance evolvability by enhancing robustness and create the conditions necessary for evolutionary success.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

Year:  2020        PMID: 33273072     DOI: 10.1126/science.abb5962

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  15 in total

1.  Protective effect of the stressed supernatant from Lactococcus lactis subsp. lactis and its metabolic analysis.

Authors:  Yihui Gao; Jiaqing Zhu; Liang Zhao; Lianming Cui; Changcheng Zhao; Juanjuan Yi; Xin Liu; Qiaozhen Kang; Limin Hao; Laizheng Lu; Jike Lu
Journal:  Arch Microbiol       Date:  2022-06-25       Impact factor: 2.552

2.  Low protein expression enhances phenotypic evolvability by intensifying selection on folding stability.

Authors:  Shraddha Karve; Pouria Dasmeh; Jia Zheng; Andreas Wagner
Journal:  Nat Ecol Evol       Date:  2022-07-07       Impact factor: 19.100

3.  Heterogeneity of the GFP fitness landscape and data-driven protein design.

Authors:  Louisa Gonzalez Somermeyer; Aubin Fleiss; Alexander S Mishin; Nina G Bozhanova; Anna A Igolkina; Jens Meiler; Maria-Elisenda Alaball Pujol; Ekaterina V Putintseva; Karen S Sarkisyan; Fyodor A Kondrashov
Journal:  Elife       Date:  2022-05-05       Impact factor: 8.713

4.  Structural genomics approach to investigate deleterious impact of nsSNPs in conserved telomere maintenance component 1.

Authors:  Arunabh Choudhury; Taj Mohammad; Nikhil Samarth; Afzal Hussain; Md Tabish Rehman; Asimul Islam; Mohamed F Alajmi; Shailza Singh; Md Imtaiyaz Hassan
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

5.  An Emerging Link between Robustness and Evolvability in Directed Protein Evolution.

Authors:  Katherine T Grasso; Abhishek Chatterjee
Journal:  Biochemistry       Date:  2021-04-19       Impact factor: 3.321

6.  Kinase Function of Brassinosteroid Receptor Specified by Two Allosterically Regulated Subdomains.

Authors:  Khawar Ali; Wenjuan Li; Yaopeng Qin; Shanshan Wang; Lijie Feng; Qiang Wei; Qunwei Bai; Bowen Zheng; Guishuang Li; Hongyan Ren; Guang Wu
Journal:  Front Plant Sci       Date:  2022-01-13       Impact factor: 5.753

7.  AMaLa: Analysis of Directed Evolution Experiments via Annealed Mutational Approximated Landscape.

Authors:  Luca Sesta; Guido Uguzzoni; Jorge Fernandez-de-Cossio-Diaz; Andrea Pagnani
Journal:  Int J Mol Sci       Date:  2021-10-09       Impact factor: 5.923

Review 8.  CDK9 keeps RNA polymerase II on track.

Authors:  Sylvain Egloff
Journal:  Cell Mol Life Sci       Date:  2021-06-19       Impact factor: 9.261

9.  Mistranslation Reduces Mutation Load in Evolving Proteins through Negative Epistasis with DNA Mutations.

Authors:  Jia Zheng; Ning Guo; Andreas Wagner
Journal:  Mol Biol Evol       Date:  2021-10-27       Impact factor: 16.240

10.  Secretory quality control constrains functional selection-associated protein structure innovation.

Authors:  Bin Cheng; Jian-Min Lv; Yu-Lin Liang; Li Zhu; Xiao-Ping Huang; Hai-Yun Li; Lawrence A Potempa; Shang-Rong Ji; Yi Wu
Journal:  Commun Biol       Date:  2022-03-25
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