Literature DB >> 33269998

Poseidonibacter parvus sp. nov., isolated from a squid.

Min Ji Kim1, Min-Gyung Baek1, Su-Kyoung Shin2, Hana Yi3,1.   

Abstract

A Gram-stain-negative, aerobic, short rod-shaped, motile, brownish-coloured bacterium, termed strain LPB0137T, was isolated from a squid. Its cells could grow weakly on marine agar 2216 with 0.04 % 2,3,5-triphenyl tetrazolium chloride (TTC). Each cell of strain LPB0137T has a circular chromosome with a length of 2.87 Mb and 27.7 mol% DNA G+C content. The genome includes 2698 protein-coding genes and six rRNA operons. In 16S rRNA gene sequence trees, strain LPB0137T formed a robust monophyletic clade with Poseidonibacter antarcticus SM1702T with a sequence similarity of 98.3 %. However, the average nucleotide identity and in silico DNA-DNA hybridization values between the two type strains were low (83.9 and 28.1 %, respectively). The overall phenotypic and genomic features of strain LPB0137T supported its assignment to the genus Poseidonibacter. However, the relatively low gene and genome sequence similarity between this strain and other type strains of the genus Poseidonibacter and several enzymatic characteristics indicated the taxonomic novelty of the isolated strain as a new member of the genus Poseidonibacter. Therefore, based on the phylogenetic and phenotypic characteristics of LPB0137T, we proposed a novel species of the genus Poseidonibacter for it, with the name Poseidonibacter parvus sp. nov. The type strain of this new species is thus LPB0137T (=KACC 18888T=JCM 31548T).

Entities:  

Keywords:  Arcobacter; Arcobacter peruensis; Poseidonibacter parvus; squid

Year:  2020        PMID: 33269998     DOI: 10.1099/ijsem.0.004590

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

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Authors:  Dadong Dai; Yangjie Li; Wenxuan He; Fang Qin; Jinshui Zheng; Ming Sun; Dechao Zhang
Journal:  Antonie Van Leeuwenhoek       Date:  2021-02-06       Impact factor: 2.271

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Authors:  Siming Li; Tim Young; Stephen Archer; Kevin Lee; Shaneel Sharma; Andrea C Alfaro
Journal:  Curr Microbiol       Date:  2022-01-29       Impact factor: 2.188

  2 in total

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