Literature DB >> 33266157

Digital PCR: What Relevance to Plant Studies?

Caterina Morcia1, Roberta Ghizzoni1, Chiara Delogu2, Lorella Andreani2, Paola Carnevali3, Valeria Terzi1.   

Abstract

Digital PCR (dPCR) is a breakthrough technology that able to provide sensitive and absolute nucleic acid quantification. It is a third-generation technology in the field of nucleic acid amplification. A unique feature of the technique is that of dividing the sample into numerous separate compartments, in each of which an independent amplification reaction takes place. Several instrumental platforms have been developed for this purpose, and different statistical approaches are available for reading the digital output data. The dPCR assays developed so far in the plant science sector were identified in the literature, and the major applications, advantages, disadvantages, and applicative perspectives of the technique are presented and discussed in this review.

Entities:  

Keywords:  copy number variation; diagnostics; digital PCR; gene expression; genetic traceability; genetically modified organisms; species

Year:  2020        PMID: 33266157     DOI: 10.3390/biology9120433

Source DB:  PubMed          Journal:  Biology (Basel)        ISSN: 2079-7737


  6 in total

1.  Development of Droplet Digital PCR Assay for Detection of Seed-Borne Burkholderia glumae and B. gladioli Causing Bacterial Panicle Blight Disease of Rice.

Authors:  Jiannan Zhang; Jinyan Luo; Lei Chen; Temoor Ahmed; Saqer S Alotaibi; Yanli Wang; Guochang Sun; Bin Li; Qianli An
Journal:  Microorganisms       Date:  2022-06-15

2.  High-Throughput and Accurate Determination of Transgene Copy Number and Zygosity in Transgenic Maize: From DNA Extraction to Data Analysis.

Authors:  Fang Liu; Jinkui Cheng; Xuhua Liu; Xi-Qing Wang
Journal:  Int J Mol Sci       Date:  2021-11-19       Impact factor: 5.923

3.  A Duplex-Droplet Digital PCR Assay for Simultaneous Quantitative Detection of Monilinia fructicola and Monilinia laxa on Stone Fruits.

Authors:  Celeste Raguseo; Donato Gerin; Stefania Pollastro; Caterina Rotolo; Palma Rosa Rotondo; Francesco Faretra; Rita Milvia De Miccolis Angelini
Journal:  Front Microbiol       Date:  2021-11-29       Impact factor: 5.640

4.  Development of a Novel Primer-TaqMan Probe Set for Diagnosis and Quantification of Meloidogyne enterolobii in Soil Using qPCR and Droplet Digital PCR Assays.

Authors:  Yuan Chen; Haibo Long; Tuizi Feng; Yueling Pei; Yanfang Sun; Xinchun Zhang
Journal:  Int J Mol Sci       Date:  2022-09-23       Impact factor: 6.208

5.  Digital PCR for Genotype Quantification: A Case Study in a Pasta Production Chain.

Authors:  Caterina Morcia; Valeria Terzi; Roberta Ghizzoni; Chiara Vaiuso; Chiara Delogu; Lorella Andreani; Andrea Venturini; Paola Carnevali; Pier Paolo Pompa; Giorgio Tumino
Journal:  Biology (Basel)       Date:  2021-05-09

6.  Muscat Flavor in Grapevine: A Digital PCR Assay to Track Allelic Variation in VvDXS Gene.

Authors:  Caterina Morcia; Giorgio Tumino; Stefano Raimondi; Anna Schneider; Valeria Terzi
Journal:  Genes (Basel)       Date:  2021-05-16       Impact factor: 4.096

  6 in total

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