Literature DB >> 33263925

Ingredients for robustness.

Nihat Ay1,2,3.   

Abstract

A core property of robust systems is given by the invariance of their function against the removal of some of their structural components. This intuition has been formalised in the context of input-output maps, thereby introducing the notion of exclusion independence. We review work on how this formalisation allows us to derive characterisation theorems that provide a basis for the design of robust systems.

Entities:  

Keywords:  Interaction order; Knockouts; Neutrality; Robustness

Year:  2020        PMID: 33263925      PMCID: PMC7719111          DOI: 10.1007/s12064-020-00332-4

Source DB:  PubMed          Journal:  Theory Biosci        ISSN: 1431-7613            Impact factor:   1.919


  8 in total

Review 1.  Perspective: Evolution and detection of genetic robustness.

Authors:  J Arjan G M de Visser; Joachim Hermisson; Günter P Wagner; Lauren Ancel Meyers; Homayoun Bagheri-Chaichian; Jeffrey L Blanchard; Lin Chao; James M Cheverud; Santiago F Elena; Walter Fontana; Greg Gibson; Thomas F Hansen; David Krakauer; Richard C Lewontin; Charles Ofria; Sean H Rice; George von Dassow; Andreas Wagner; Michael C Whitlock
Journal:  Evolution       Date:  2003-09       Impact factor: 3.694

2.  Policing stabilizes construction of social niches in primates.

Authors:  Jessica C Flack; Michelle Girvan; Frans B M de Waal; David C Krakauer
Journal:  Nature       Date:  2006-01-26       Impact factor: 49.962

3.  Robustness and complexity co-constructed in multimodal signalling networks.

Authors:  Nihat Ay; Jessica Flack; David C Krakauer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-03-29       Impact factor: 6.237

4.  Geometric robustness theory and biological networks.

Authors:  Nihat Ay; David C Krakauer
Journal:  Theory Biosci       Date:  2006-08-02       Impact factor: 1.919

5.  Diversity, dilemmas, and monopolies of niche construction.

Authors:  David C Krakauer; Karen M Page; Douglas H Erwin
Journal:  Am Nat       Date:  2009-01       Impact factor: 3.926

6.  Robustness, canalyzing functions and systems design.

Authors:  Johannes Rauh; Nihat Ay
Journal:  Theory Biosci       Date:  2013-09-18       Impact factor: 1.919

7.  From sequences to shapes and back: a case study in RNA secondary structures.

Authors:  P Schuster; W Fontana; P F Stadler; I L Hofacker
Journal:  Proc Biol Sci       Date:  1994-03-22       Impact factor: 5.349

8.  Robustness of Boolean dynamics under knockouts.

Authors:  Gunnar Boldhaus; Nils Bertschinger; Johannes Rauh; Eckehard Olbrich; Konstantin Klemm
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2010-08-18
  8 in total
  1 in total

1.  The historical nature of biological complexity and the ineffectiveness of the mathematical approach to it.

Authors:  Saverio Forestiero
Journal:  Theory Biosci       Date:  2022-05-18       Impact factor: 1.315

  1 in total

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