Literature DB >> 33261493

Machine learning for vibrational spectroscopy via divide-and-conquer semiclassical initial value representation molecular dynamics with application to N-methylacetamide.

Michele Gandolfi1, Alessandro Rognoni1, Chiara Aieta1, Riccardo Conte1, Michele Ceotto1.   

Abstract

A machine learning algorithm for partitioning the nuclear vibrational space into subspaces is introduced. The subdivision criterion is based on Liouville's theorem, i.e., the best preservation of the unitary of the reduced dimensionality Jacobian determinant within each subspace along a probe full-dimensional classical trajectory. The algorithm is based on the idea of evolutionary selection, and it is implemented through a probability graph representation of the vibrational space partitioning. We interface this customized version of genetic algorithms with our divide-and-conquer semiclassical initial value representation method for the calculation of molecular power spectra. First, we benchmark the algorithm by calculating the vibrational power spectra of two model systems, for which the exact subspace division is known. Then, we apply it to the calculation of the power spectrum of methane. Exact calculations and full-dimensional semiclassical spectra of this small molecule are available and provide an additional test of the accuracy of the new approach. Finally, the algorithm is applied to the divide-and-conquer semiclassical calculation of the power spectrum of 12-atom trans-N-methylacetamide.

Entities:  

Year:  2020        PMID: 33261493     DOI: 10.1063/5.0031892

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  3 in total

1.  Quantum Anharmonic Calculations of Vibrational Spectra for Water Adsorbed on Titania Anatase(101) Surface: Dissociative versus Molecular Adsorption.

Authors:  Marco Cazzaniga; Marco Micciarelli; Fabio Gabas; Fabio Finocchi; Michele Ceotto
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2022-07-19       Impact factor: 4.177

2.  Quantum Calculations on a New CCSD(T) Machine-Learned Potential Energy Surface Reveal the Leaky Nature of Gas-Phase Trans and Gauche Ethanol Conformers.

Authors:  Apurba Nandi; Riccardo Conte; Chen Qu; Paul L Houston; Qi Yu; Joel M Bowman
Journal:  J Chem Theory Comput       Date:  2022-08-11       Impact factor: 6.578

3.  Quantum Vibrational Spectroscopy of Explicitly Solvated Thymidine in Semiclassical Approximation.

Authors:  Fabio Gabas; Riccardo Conte; Michele Ceotto
Journal:  J Phys Chem Lett       Date:  2022-02-03       Impact factor: 6.475

  3 in total

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