Literature DB >> 33257231

Genome-wide analysis of JMJ-C histone demethylase family involved in salt-tolerance in Gossypium hirsutum L.

Zhimao Sun1, Xiaoyan Wang2, Kaikai Qiao3, Shuli Fan4, Qifeng Ma5.   

Abstract

The jumonji C (JMJ-C) domain-containing protein is a histone demethylase and is involved in plant stress. However, the function of the JMJ-C gene family in cotton is still not confirmed. Herein, 25, 26, 52, and 53 members belonging to the JMJ-C gene family were identified in Gossypium raimondii, Gossypium arboreum, Gossypium hirsutum, and Gossypium barbadense, respectively. Based on phylogenetic relationships and conserved domains, the JMJ-C genes were categorized into five subfamilies, KDM3, KDM4, KDM5, JMJC, and JMJD6. The chromosomal location, gene structure, motif compositions, and cis-elements have been displayed. The collinear investigation showed that whole-genome duplication event is the mainly power to drive JMJ-C gene family expansion. Transcriptome and qRT-PCR analysis revealed that eight GhJMJs were induced by salt and PEG treatment. Further assays confirmed that GhJMJ34/40 greatly improved salt and osmotic tolerance in Saccharomyces cerevisiae. These results help clarify JMJ-C protein functions in preparation for further study.
Copyright © 2020 Elsevier Masson SAS. All rights reserved.

Entities:  

Keywords:  Expression pattern; Gossypium; Histone demethylation; Jumonji-C (JMJ-C); Salinity stress

Year:  2020        PMID： 33257231     DOI： 10.1016/j.plaphy.2020.11.029

Source DB:  PubMed          Journal:  Plant Physiol Biochem        ISSN： 0981-9428            Impact factor:   4.270


  7 in total

1.  Genome-wide identification of the jumonji C domain- containing histone demethylase gene family in wheat and their expression analysis under drought stress.

Authors:  Xinhua Wang; Cuili Pan; Jiaohui Long; Shuangyu Bai; Mingming Yao; Jiajing Chen; Gang Sun; Yalei Fan; Zhangjun Wang; Fenglou Liu; Caixia Liu; Qingfeng Li
Journal:  Front Plant Sci       Date:  2022-08-25       Impact factor: 6.627

2.  GhBOP1 as a Key Factor of Ribosomal Biogenesis: Development of Wrinkled Leaves in Upland Cotton.

Authors:  Yanwen Wang; Zhimao Sun; Long Wang; Lingling Chen; Lina Ma; Jiaoyan Lv; Kaikai Qiao; Shuli Fan; Qifeng Ma
Journal:  Int J Mol Sci       Date:  2022-09-01       Impact factor: 6.208

3.  Genome-wide Characterization of the JmjC Domain-Containing Histone Demethylase Gene Family Reveals GhJMJ24 and GhJMJ49 Involving in Somatic Embryogenesis Process in Cotton.

Authors:  Yan Li; Shouhong Zhu; Jinbo Yao; Shengtao Fang; Tengyu Li; Bei Li; Xinyu Wang; Mingyang Wang; Lanxin Wu; Jingwen Pan; Xuemei Feng; Wei Chen; Yongshan Zhang
Journal:  Front Mol Biosci       Date:  2022-04-27

4.  Genome-wide identification of Gramineae histone modification genes and their potential roles in regulating wheat and maize growth and stress responses.

Authors:  Liwei Zheng; Shengjie Ma; Dandan Shen; Hong Fu; Yue Wang; Ying Liu; Kamran Shah; Caipeng Yue; Jinyong Huang
Journal:  BMC Plant Biol       Date:  2021-11-20       Impact factor: 4.215

5.  Evolutionary History and Functional Diversification of the JmjC Domain-Containing Histone Demethylase Gene Family in Plants.

Authors:  Shifeng Ma; Zhiqiang Zhang; Yingqiang Long; Wenqi Huo; Yuzhi Zhang; Xiaoqing Yang; Jie Zhang; Xinyang Li; Qiying Du; Wei Liu; Daigang Yang; Xiongfeng Ma
Journal:  Plants (Basel)       Date:  2022-04-12

Review 6.  Methylation hallmarks on the histone tail as a linker of osmotic stress and gene transcription.

Authors:  Mu Xiao; Jinbiao Wang; Fang Xu
Journal:  Front Plant Sci       Date:  2022-08-10       Impact factor: 6.627

7.  Evaluating Variation in Germination and Growth of Landraces of Barley (Hordeum vulgare L.) Under Salinity Stress.

Authors:  Jonathan E Cope; Gareth J Norton; Timothy S George; Adrian C Newton
Journal:  Front Plant Sci       Date:  2022-06-16       Impact factor: 6.627
  7 in total

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