Literature DB >> 33255267

Correlating Radiomic Features of Heterogeneity on CT with Circulating Tumor DNA in Metastatic Melanoma.

Andrew B Gill1,2,3, Leonardo Rundo1,2, Jonathan C M Wan4, Doreen Lau1,2, Jeries P Zawaideh1, Ramona Woitek1,2, Fulvio Zaccagna1, Lucian Beer1, Davina Gale2,4, Evis Sala1,2, Dominique-Laurent Couturier4, Pippa G Corrie5, Nitzan Rosenfeld2,4, Ferdia A Gallagher1,2,3.   

Abstract

Clinical imaging methods, such as computed tomography (CT), are used for routine tumor response monitoring. Imaging can also reveal intratumoral, intermetastatic, and interpatient heterogeneity, which can be quantified using radiomics. Circulating tumor DNA (ctDNA) in the plasma is a sensitive and specific biomarker for response monitoring. Here we evaluated the interrelationship between circulating tumor DNA mutant allele fraction (ctDNAmaf), obtained by targeted amplicon sequencing and shallow whole genome sequencing, and radiomic measurements of CT heterogeneity in patients with stage IV melanoma. ctDNAmaf and radiomic observations were obtained from 15 patients with a total of 70 CT examinations acquired as part of a prospective trial. 26 of 39 radiomic features showed a significant relationship with log(ctDNAmaf). Principal component analysis was used to define a radiomics signature that predicted ctDNAmaf independent of lesion volume. This radiomics signature and serum lactate dehydrogenase were independent predictors of ctDNAmaf. Together, these results suggest that radiomic features and ctDNAmaf may serve as complementary clinical tools for treatment monitoring.

Entities:  

Keywords:  circulating tumor DNA; liquid biopsy; radiomics; tumor heterogeneity; tumor imaging

Year:  2020        PMID: 33255267      PMCID: PMC7759931          DOI: 10.3390/cancers12123493

Source DB:  PubMed          Journal:  Cancers (Basel)        ISSN: 2072-6694            Impact factor:   6.639


  51 in total

1.  Noninvasive identification and monitoring of cancer mutations by targeted deep sequencing of plasma DNA.

Authors:  Tim Forshew; Muhammed Murtaza; Christine Parkinson; Davina Gale; Dana W Y Tsui; Fiona Kaper; Sarah-Jane Dawson; Anna M Piskorz; Mercedes Jimenez-Linan; David Bentley; James Hadfield; Andrew P May; Carlos Caldas; James D Brenton; Nitzan Rosenfeld
Journal:  Sci Transl Med       Date:  2012-05-30       Impact factor: 17.956

2.  ctDNA monitoring using patient-specific sequencing and integration of variant reads.

Authors:  Jonathan C M Wan; Katrin Heider; Davina Gale; Suzanne Murphy; Eyal Fisher; Florent Mouliere; Andrea Ruiz-Valdepenas; Angela Santonja; James Morris; Dineika Chandrananda; Andrea Marshall; Andrew B Gill; Pui Ying Chan; Emily Barker; Gemma Young; Wendy N Cooper; Irena Hudecova; Francesco Marass; Richard Mair; Kevin M Brindle; Grant D Stewart; Jean E Abraham; Carlos Caldas; Doris M Rassl; Robert C Rintoul; Constantine Alifrangis; Mark R Middleton; Ferdia A Gallagher; Christine Parkinson; Amer Durrani; Ultan McDermott; Christopher G Smith; Charles Massie; Pippa G Corrie; Nitzan Rosenfeld
Journal:  Sci Transl Med       Date:  2020-06-17       Impact factor: 17.956

Review 3.  Circulating-tumor DNA as an early detection and diagnostic tool.

Authors:  Timothy M Butler; Paul T Spellman; Joe Gray
Journal:  Curr Opin Genet Dev       Date:  2017-01-23       Impact factor: 5.578

4.  A concordance correlation coefficient to evaluate reproducibility.

Authors:  L I Lin
Journal:  Biometrics       Date:  1989-03       Impact factor: 2.571

5.  Metastatic melanoma: pretreatment contrast-enhanced CT texture parameters as predictive biomarkers of survival in patients treated with pembrolizumab.

Authors:  Carole Durot; Sébastien Mulé; Philippe Soyer; Aude Marchal; Florent Grange; Christine Hoeffel
Journal:  Eur Radiol       Date:  2019-01-15       Impact factor: 5.315

Review 6.  Translational implications of tumor heterogeneity.

Authors:  Mariam Jamal-Hanjani; Sergio A Quezada; James Larkin; Charles Swanton
Journal:  Clin Cancer Res       Date:  2015-03-15       Impact factor: 12.531

7.  Serum markers lactate dehydrogenase and S100B predict independently disease outcome in melanoma patients with distant metastasis.

Authors:  B Weide; M Elsässer; P Büttner; A Pflugfelder; U Leiter; T K Eigentler; J Bauer; M Witte; F Meier; C Garbe
Journal:  Br J Cancer       Date:  2012-07-10       Impact factor: 7.640

Review 8.  Radiomics and liquid biopsy in oncology: the holons of systems medicine.

Authors:  Emanuele Neri; Marzia Del Re; Fabiola Paiar; Paola Erba; Paola Cocuzza; Daniele Regge; Romano Danesi
Journal:  Insights Imaging       Date:  2018-11-14

9.  Reliability of Radiomic Features Across Multiple Abdominal CT Image Acquisition Settings: A Pilot Study Using ACR CT Phantom.

Authors:  Lin Lu; Yongguang Liang; Lawrence H Schwartz; Binsheng Zhao
Journal:  Tomography       Date:  2019-03

10.  Tumor mutation burden and circulating tumor DNA in combined CTLA-4 and PD-1 antibody therapy in metastatic melanoma - results of a prospective biomarker study.

Authors:  Andrea Forschner; Florian Battke; Dirk Hadaschik; Martin Schulze; Stephanie Weißgraeber; Chung-Ting Han; Maria Kopp; Maximilian Frick; Bernhard Klumpp; Nicola Tietze; Teresa Amaral; Peter Martus; Tobias Sinnberg; Thomas Eigentler; Ulrike Keim; Claus Garbe; Dennis Döcker; Saskia Biskup
Journal:  J Immunother Cancer       Date:  2019-07-12       Impact factor: 13.751

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  3 in total

1.  Positron Emission Tomography-Based Short-Term Efficacy Evaluation and Prediction in Patients With Non-Small Cell Lung Cancer Treated With Hypo-Fractionated Radiotherapy.

Authors:  Yi-Qing Jiang; Qin Gao; Han Chen; Xiang-Xiang Shi; Jing-Bo Wu; Yue Chen; Yan Zhang; Hao-Wen Pang; Sheng Lin
Journal:  Front Oncol       Date:  2021-02-25       Impact factor: 6.244

2.  Delta Radiomics Analysis for Local Control Prediction in Pancreatic Cancer Patients Treated Using Magnetic Resonance Guided Radiotherapy.

Authors:  Davide Cusumano; Luca Boldrini; Poonam Yadav; Calogero Casà; Sangjune Laurence Lee; Angela Romano; Antonio Piras; Giuditta Chiloiro; Lorenzo Placidi; Francesco Catucci; Claudio Votta; Gian Carlo Mattiucci; Luca Indovina; Maria Antonietta Gambacorta; Michael Bassetti; Vincenzo Valentini
Journal:  Diagnostics (Basel)       Date:  2021-01-05

3.  Multiparametric MRI of early tumor response to immune checkpoint blockade in metastatic melanoma.

Authors:  Doreen Lau; Mary A McLean; Andrew N Priest; Andrew B Gill; Francis Scott; Ilse Patterson; Bruno Carmo; Frank Riemer; Joshua D Kaggie; Amy Frary; Doreen Milne; Catherine Booth; Arthur Lewis; Michal Sulikowski; Lee Brown; Jean-Martin Lapointe; Luigi Aloj; Martin J Graves; Kevin M Brindle; Pippa G Corrie; Ferdia A Gallagher
Journal:  J Immunother Cancer       Date:  2021-09       Impact factor: 13.751

  3 in total

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