Literature DB >> 33253918

Uncertainty quantification in drug design.

Lewis H Mervin1, Simon Johansson2, Elizaveta Semenova3, Kathryn A Giblin4, Ola Engkvist5.   

Abstract

Machine learning and artificial intelligence are increasingly being applied to the drug-design process as a result of the development of novel algorithms, growing access, the falling cost of computation and the development of novel technologies for generating chemically and biologically relevant data. There has been recent progress in fields such as molecular de novo generation, synthetic route prediction and, to some extent, property predictions. Despite this, most research in these fields has focused on improving the accuracy of the technologies, rather than on quantifying the uncertainty in the predictions. Uncertainty quantification will become a key component in autonomous decision making and will be crucial for integrating machine learning and chemistry automation to create an autonomous design-make-test-analyse cycle. This review covers the empirical, frequentist and Bayesian approaches to uncertainty quantification, and outlines how they can be used for drug design. We also outline the impact of uncertainty quantification on decision making.
Copyright © 2020 Elsevier Ltd. All rights reserved.

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Year:  2020        PMID: 33253918     DOI: 10.1016/j.drudis.2020.11.027

Source DB:  PubMed          Journal:  Drug Discov Today        ISSN: 1359-6446            Impact factor:   7.851


  4 in total

Review 1.  Impact of Artificial Intelligence on Compound Discovery, Design, and Synthesis.

Authors:  Filip Miljković; Raquel Rodríguez-Pérez; Jürgen Bajorath
Journal:  ACS Omega       Date:  2021-11-29

Review 2.  Uncertainty quantification: Can we trust artificial intelligence in drug discovery?

Authors:  Jie Yu; Dingyan Wang; Mingyue Zheng
Journal:  iScience       Date:  2022-07-21

3.  Framework for Testing Robustness of Machine Learning-Based Classifiers.

Authors:  Joshua Chuah; Uwe Kruger; Ge Wang; Pingkun Yan; Juergen Hahn
Journal:  J Pers Med       Date:  2022-08-14

4.  A universal similarity based approach for predictive uncertainty quantification in materials science.

Authors:  Vadim Korolev; Iurii Nevolin; Pavel Protsenko
Journal:  Sci Rep       Date:  2022-09-02       Impact factor: 4.996

  4 in total

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