Literature DB >> 33253586

Proteome-Scale Analysis of Protein S-Acylation Comes of Age.

Yang Wang1, Wei Yang1,2.   

Abstract

Protein S-acylation (commonly known as palmitoylation) is a widespread reversible lipid modification, which plays critical roles in regulating protein localization, activity, stability, and complex formation. The deregulation of protein S-acylation contributes to many diseases such as cancer and neurodegenerative disorders. The past decade has witnessed substantial progress in proteomic analysis of protein S-acylation, which significantly advanced our understanding of S-acylation biology. In this review, we summarized the techniques for the enrichment of S-acylated proteins or peptides, critically reviewed proteomic studies of protein S-acylation at eight different levels, and proposed major challenges for the S-acylproteomics field. In summary, proteome-scale analysis of protein S-acylation comes of age and will play increasingly important roles in discovering new disease mechanisms, biomarkers, and therapeutic targets.

Entities:  

Keywords:  ABE; APT; MLCC; PAT; S-acylation; S-palmitoylation; click chemistry; palmitoylation; proteomics

Mesh:

Substances:

Year:  2020        PMID: 33253586      PMCID: PMC7775881          DOI: 10.1021/acs.jproteome.0c00409

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  87 in total

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Authors:  J A Duncan; A G Gilman
Journal:  J Biol Chem       Date:  1998-06-19       Impact factor: 5.157

2.  Huntingtin-interacting protein 14 is a type 1 diabetes candidate protein regulating insulin secretion and beta-cell apoptosis.

Authors:  Lukas Adrian Berchtold; Zenia Marian Størling; Fernanda Ortis; Kasper Lage; Claus Bang-Berthelsen; Regine Bergholdt; Jacob Hald; Caroline Anna Brorsson; Decio Laks Eizirik; Flemming Pociot; Søren Brunak; Joachim Størling
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-24       Impact factor: 11.205

Review 3.  Protein palmitoylation and cancer.

Authors:  Pin-Joe Ko; Scott J Dixon
Journal:  EMBO Rep       Date:  2018-09-19       Impact factor: 8.807

4.  Myristoylation of proteins in platelets occurs predominantly through thioester linkages.

Authors:  L Muszbek; M Laposata
Journal:  J Biol Chem       Date:  1993-04-15       Impact factor: 5.157

5.  DHHC5 protein palmitoylates flotillin-2 and is rapidly degraded on induction of neuronal differentiation in cultured cells.

Authors:  Yi Li; Brent R Martin; Benjamin F Cravatt; Sandra L Hofmann
Journal:  J Biol Chem       Date:  2011-11-11       Impact factor: 5.157

6.  Development of highly potent inhibitors of the Ras-targeting human acyl protein thioesterases based on substrate similarity design.

Authors:  Christian Hedberg; Frank J Dekker; Marion Rusch; Steffen Renner; Stefan Wetzel; Nachiket Vartak; Claas Gerding-Reimers; Robin S Bon; Philippe I H Bastiaens; Herbert Waldmann
Journal:  Angew Chem Int Ed Engl       Date:  2011-09-09       Impact factor: 15.336

7.  Site-Specific Proteomic Mapping Identifies Selectively Modified Regulatory Cysteine Residues in Functionally Distinct Protein Networks.

Authors:  Neal S Gould; Perry Evans; Pablo Martínez-Acedo; Stefano M Marino; Vadim N Gladyshev; Kate S Carroll; Harry Ischiropoulos
Journal:  Chem Biol       Date:  2015-07-09

8.  Hip14l-deficient mice develop neuropathological and behavioural features of Huntington disease.

Authors:  Liza M Sutton; Shaun S Sanders; Stefanie L Butland; Roshni R Singaraja; Sonia Franciosi; Amber L Southwell; Crystal N Doty; Mandi E Schmidt; Katherine K N Mui; Vlad Kovalik; Fiona B Young; Weining Zhang; Michael R Hayden
Journal:  Hum Mol Genet       Date:  2012-10-16       Impact factor: 6.150

9.  Substrate recognition by the cell surface palmitoyl transferase DHHC5.

Authors:  Jacqueline Howie; Louise Reilly; Niall J Fraser; Julia M Vlachaki Walker; Krzysztof J Wypijewski; Michael L J Ashford; Sarah C Calaghan; Heather McClafferty; Lijun Tian; Michael J Shipston; Andrii Boguslavskyi; Michael J Shattock; William Fuller
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-24       Impact factor: 11.205

10.  A reference map of the human binary protein interactome.

Authors:  Katja Luck; Dae-Kyum Kim; Luke Lambourne; Kerstin Spirohn; Bridget E Begg; Wenting Bian; Ruth Brignall; Tiziana Cafarelli; Francisco J Campos-Laborie; Benoit Charloteaux; Dongsic Choi; Atina G Coté; Meaghan Daley; Steven Deimling; Alice Desbuleux; Amélie Dricot; Marinella Gebbia; Madeleine F Hardy; Nishka Kishore; Jennifer J Knapp; István A Kovács; Irma Lemmens; Miles W Mee; Joseph C Mellor; Carl Pollis; Carles Pons; Aaron D Richardson; Sadie Schlabach; Bridget Teeking; Anupama Yadav; Mariana Babor; Dawit Balcha; Omer Basha; Christian Bowman-Colin; Suet-Feung Chin; Soon Gang Choi; Claudia Colabella; Georges Coppin; Cassandra D'Amata; David De Ridder; Steffi De Rouck; Miquel Duran-Frigola; Hanane Ennajdaoui; Florian Goebels; Liana Goehring; Anjali Gopal; Ghazal Haddad; Elodie Hatchi; Mohamed Helmy; Yves Jacob; Yoseph Kassa; Serena Landini; Roujia Li; Natascha van Lieshout; Andrew MacWilliams; Dylan Markey; Joseph N Paulson; Sudharshan Rangarajan; John Rasla; Ashyad Rayhan; Thomas Rolland; Adriana San-Miguel; Yun Shen; Dayag Sheykhkarimli; Gloria M Sheynkman; Eyal Simonovsky; Murat Taşan; Alexander Tejeda; Vincent Tropepe; Jean-Claude Twizere; Yang Wang; Robert J Weatheritt; Jochen Weile; Yu Xia; Xinping Yang; Esti Yeger-Lotem; Quan Zhong; Patrick Aloy; Gary D Bader; Javier De Las Rivas; Suzanne Gaudet; Tong Hao; Janusz Rak; Jan Tavernier; David E Hill; Marc Vidal; Frederick P Roth; Michael A Calderwood
Journal:  Nature       Date:  2020-04-08       Impact factor: 49.962

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  4 in total

Review 1.  Emerging roles of protein palmitoylation and its modifying enzymes in cancer cell signal transduction and cancer therapy.

Authors:  Zhuang Liu; Mingming Xiao; Yaqi Mo; Han Wang; Yamei Han; Xu Zhao; Xue Yang; Zhenxing Liu; Bo Xu
Journal:  Int J Biol Sci       Date:  2022-05-09       Impact factor: 10.750

Review 2.  Regulation of Dynamic Protein S-Acylation.

Authors:  Jessica J Chen; Ying Fan; Darren Boehning
Journal:  Front Mol Biosci       Date:  2021-04-26

Review 3.  Protein Lipidation by Palmitate Controls Macrophage Function.

Authors:  Jeroen Guns; Sam Vanherle; Jerome J A Hendriks; Jeroen F J Bogie
Journal:  Cells       Date:  2022-02-06       Impact factor: 6.600

Review 4.  On the Road to Accurate Protein Biomarkers in Prostate Cancer Diagnosis and Prognosis: Current Status and Future Advances.

Authors:  Yiwu Yan; Su Yeon Yeon; Chen Qian; Sungyong You; Wei Yang
Journal:  Int J Mol Sci       Date:  2021-12-17       Impact factor: 5.923

  4 in total

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