Literature DB >> 33252190

GRIN database: A unified and manually curated repertoire of GRIN variants.

Adrián García-Recio1,2, Ana Santos-Gómez1,3, David Soto3,4, Natalia Julia-Palacios5, Àngels García-Cazorla5, Xavier Altafaj1,3, Mireia Olivella6,7.   

Abstract

Glutamatergic neurotransmission is crucial for brain development, wiring neuronal function, and synaptic plasticity mechanisms. Recent genetic studies showed the existence of autosomal dominant de novo GRIN gene variants associated with GRIN-related disorders (GRDs), a rare pediatric neurological disorder caused by N-methyl- d-aspartate receptor (NMDAR) dysfunction. Notwithstanding, GRIN variants identification is exponentially growing and their clinical, genetic, and functional annotations remain highly fragmented, representing a bottleneck in GRD patient's stratification. To shorten the gap between GRIN variant identification and patient stratification, we present the GRIN database (GRINdb), a publicly available, nonredundant, updated, and curated database gathering all available genetic, functional, and clinical data from more than 4000 GRIN variants. The manually curated GRINdb outputs on a web server, allowing query and retrieval of reported GRIN variants, and thus representing a fast and reliable bioinformatics resource for molecular clinical advice. Furthermore, the comprehensive mapping of GRIN variants' genetic and clinical information along NMDAR structure revealed important differences in GRIN variants' pathogenicity and clinical phenotypes, shedding light on GRIN-specific fingerprints. Overall, the GRINdb and web server is a resource for molecular stratification of GRIN variants, delivering clinical and investigational insights into GRDs. GRINdb is accessible at http://lmc.uab.es/grindb.
© 2020 Wiley Periodicals LLC.

Entities:  

Keywords:  NMDA receptors; disease-associated mutations; epilepsy; intellectual disability

Mesh:

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Year:  2020        PMID: 33252190     DOI: 10.1002/humu.24141

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  5 in total

1.  Complex functional phenotypes of NMDA receptor disease variants.

Authors:  Gary J Iacobucci; Beiying Liu; Han Wen; Brittany Sincox; Wenjun Zheng; Gabriela K Popescu
Journal:  Mol Psychiatry       Date:  2022-09-18       Impact factor: 13.437

Review 2.  The diverse and complex modes of action of anti-NMDA receptor autoantibodies.

Authors:  Lonnie P Wollmuth; Kelvin Chan; Laurent Groc
Journal:  Neuropharmacology       Date:  2021-05-31       Impact factor: 5.250

3.  Paradigmatic De Novo GRIN1 Variants Recapitulate Pathophysiological Mechanisms Underlying GRIN1-Related Disorder Clinical Spectrum.

Authors:  Ana Santos-Gómez; Federico Miguez-Cabello; Natalia Juliá-Palacios; Deyanira García-Navas; Víctor Soto-Insuga; Juan J García-Peñas; Patricia Fuentes; Salvador Ibáñez-Micó; Laura Cuesta; Ramón Cancho; Patricia Andreo-Lillo; Gema Gutiérrez-Aguilar; Olga Alonso-Luengo; Ignacio Málaga; Antonio Hedrera-Fernández; Àngels García-Cazorla; David Soto; Mireia Olivella; Xavier Altafaj
Journal:  Int J Mol Sci       Date:  2021-11-23       Impact factor: 5.923

Review 4.  Protein quality control of N-methyl-D-aspartate receptors.

Authors:  Taylor M Benske; Ting-Wei Mu; Ya-Juan Wang
Journal:  Front Cell Neurosci       Date:  2022-07-22       Impact factor: 6.147

5.  Evidence for the Association between the Intronic Haplotypes of Ionotropic Glutamate Receptors and First-Episode Schizophrenia.

Authors:  Katerina Hirschfeldova; Jiri Cerny; Paulina Bozikova; Viktor Kuchtiak; Tobias Rausch; Vladimir Benes; Filip Spaniel; David Gregus; Jiri Horacek; Ladislav Vyklicky; Ales Balik
Journal:  J Pers Med       Date:  2021-11-25
  5 in total

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