Literature DB >> 33247939

Pod indehiscence in common bean is associated with the fine regulation of PvMYB26.

Valerio Di Vittori1,2, Elena Bitocchi1, Monica Rodriguez3,4, Saleh Alseekh2,5, Elisa Bellucci1, Laura Nanni1, Tania Gioia6, Stefania Marzario6, Giuseppina Logozzo6, Marzia Rossato7, Concetta De Quattro7, Maria L Murgia3, Juan José Ferreira8, Ana Campa8, Chunming Xu9, Fabio Fiorani10, Arun Sampathkumar2, Anja Fröhlich2, Giovanna Attene3,4, Massimo Delledonne7, Björn Usadel10, Alisdair R Fernie2,5, Domenico Rau3, Roberto Papa1.   

Abstract

In legumes, pod shattering occurs when mature pods dehisce along the sutures, and detachment of the valves promotes seed dispersal. In Phaseolus vulgaris (L)., the major locus qPD5.1-Pv for pod indehiscence was identified recently. We developed a BC4/F4 introgression line population and narrowed the major locus down to a 22.5 kb region. Here, gene expression and a parallel histological analysis of dehiscent and indehiscent pods identified an AtMYB26 orthologue as the best candidate for loss of pod shattering, on a genomic region ~11 kb downstream of the highest associated peak. Based on mapping and expression data, we propose early and fine up-regulation of PvMYB26 in dehiscent pods. Detailed histological analysis establishes that pod indehiscence is associated with the lack of a functional abscission layer in the ventral sheath, and that the key anatomical modifications associated with pod shattering in common bean occur early during pod development. We finally propose that loss of pod shattering in legumes resulted from histological convergent evolution and that it is the result of selection at orthologous loci.
© The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Entities:  

Keywords:  zzm321990 MYB26zzm321990 ; zzm321990 Phaseolus vulgaris L; Common bean; convergent evolution; gene expression; genome-wide association study; introgression lines; pod anatomy; pod shattering

Mesh:

Year:  2021        PMID: 33247939      PMCID: PMC7921299          DOI: 10.1093/jxb/eraa553

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  43 in total

1.  Nucleotide diversity of a genomic sequence similar to SHATTERPROOF (PvSHP1) in domesticated and wild common bean (Phaseolus vulgaris L.).

Authors:  L Nanni; E Bitocchi; E Bellucci; M Rossi; D Rau; G Attene; P Gepts; R Papa
Journal:  Theor Appl Genet       Date:  2011-08-10       Impact factor: 5.699

2.  Analyzing real-time PCR data by the comparative C(T) method.

Authors:  Thomas D Schmittgen; Kenneth J Livak
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Journal:  Trends Plant Sci       Date:  2014-02-27       Impact factor: 18.313

4.  Identification and characterization of a homologue to the Arabidopsis INDEHISCENT gene in common Bean.

Authors:  Tania Gioia; Giuseppina Logozzo; James Kami; Pierluigi Spagnoletti Zeuli; Paul Gepts
Journal:  J Hered       Date:  2012-12-12       Impact factor: 2.645

5.  Draft genome assembly and annotation of Glycyrrhiza uralensis, a medicinal legume.

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Journal:  Plant J       Date:  2016-10-24       Impact factor: 6.417

6.  SHATTERPROOF MADS-box genes control seed dispersal in Arabidopsis.

Authors:  S J Liljegren; G S Ditta; Y Eshed; B Savidge; J L Bowman; M F Yanofsky
Journal:  Nature       Date:  2000-04-13       Impact factor: 49.962

7.  Molecular basis of a shattering resistance boosting global dissemination of soybean.

Authors:  Hideyuki Funatsuki; Masaya Suzuki; Aya Hirose; Hiroki Inaba; Tetsuya Yamada; Makita Hajika; Kunihiko Komatsu; Takeshi Katayama; Takashi Sayama; Masao Ishimoto; Kaien Fujino
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

8.  Control of fruit patterning in Arabidopsis by INDEHISCENT.

Authors:  Sarah J Liljegren; Adrienne H K Roeder; Sherry A Kempin; Kristina Gremski; Lars Østergaard; Sonia Guimil; Daengnoy K Reyes; Martin F Yanofsky
Journal:  Cell       Date:  2004-03-19       Impact factor: 41.582

Review 9.  Recent Advances in the Transcriptional Regulation of Secondary Cell Wall Biosynthesis in the Woody Plants.

Authors:  Jin Zhang; Meng Xie; Gerald A Tuskan; Wellington Muchero; Jin-Gui Chen
Journal:  Front Plant Sci       Date:  2018-10-23       Impact factor: 5.753

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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  1 in total

1.  Genome-Wide Association Study Reveals That PvGUX1_1 Is Associated with Pod Stringlessness in Snap Bean (Phaseolus vulgaris L.).

Authors:  Zhiyuan Liu; Shuo Gao; Helong Zhang; Zhaosheng Xu; Wei Qian
Journal:  Biology (Basel)       Date:  2022-04-18
  1 in total

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