| Literature DB >> 33244144 |
Mattia Bellan1,2, Giuseppe Patti1,2, Eyal Hayden1,2, Danila Azzolina1, Mario Pirisi1,2, Antonio Acquaviva1,2, Gianluca Aimaretti1,2, Paolo Aluffi Valletti1,2, Roberto Angilletta3, Roberto Arioli1,2, Gian Carlo Avanzi1,2, Gianluca Avino1,2, Piero Emilio Balbo2, Giulia Baldon1,2, Francesca Baorda1,4, Emanuela Barbero1,2, Alessio Baricich1,2, Michela Barini2, Francesco Barone-Adesi1, Sofia Battistini1,2, Michela Beltrame1,2, Matteo Bertoli1,2, Stephanie Bertolin1,2, Marinella Bertolotti3, Marta Betti3, Flavio Bobbio2, Paolo Boffano1,2, Lucio Boglione1,4, Silvio Borrè4, Matteo Brucoli1,2, Elisa Calzaducca1,2, Edoardo Cammarata1,2, Vincenzo Cantaluppi1,2, Roberto Cantello1,2, Andrea Capponi2, Alessandro Carriero1,2, Francesco Giuseppe Casciaro1,2, Luigi Mario Castello1,2, Federico Ceruti1,2, Guido Chichino3, Emilio Chirico1,2, Carlo Cisari1,2, Micol Giulia Cittone1,2, Crizia Colombo1,2, Cristoforo Comi1,4, Eleonora Croce1,4, Tommaso Daffara1,2, Pietro Danna1,2, Francesco Della Corte1,2, Simona De Vecchi1,2, Umberto Dianzani1,2, Davide Di Benedetto1,2, Elia Esposto1,2, Fabrizio Faggiano1, Zeno Falaschi1,2, Daniela Ferrante1, Alice Ferrero1,2, Ileana Gagliardi1,2, Gianluca Gaidano, Alessandra Galbiati1,2, Silvia Gallo1,4, Pietro Luigi Garavelli2, Clara Ada Gardino1,2, Massimiliano Garzaro1,2, Maria Luisa Gastaldello1,2, Francesco Gavelli1,2, Alessandra Gennari1,2, Greta Maria Giacomini1,2, Irene Giacone1,4, Valentina Giai Via1,2, Francesca Giolitti1,2, Laura Cristina Gironi1,2, Carla Gramaglia1,2, Leonardo Grisafi1,2, Ilaria Inserra1,2, Marco Invernizzi1,2, Marco Krengli1,2, Emanuela Labella1,2, Irene Cecilia Landi1,2, Raffaella Landi1,2, Ilaria Leone1,2, Veronica Lio1,2, Luca Lorenzini1,2, Antonio Maconi3, Mario Malerba1,4, Giulia Francesca Manfredi1,2, Maria Martelli1,2, Letizia Marzari1,2, Paolo Marzullo1,2, Marco Mennuni2, Claudia Montabone1,4, Umberto Morosini1,2, Marco Mussa3, Ilaria Nerici1,2, Alessandro Nuzzo1,2, Carlo Olivieri4, Samuel Alberto Padelli1,4, Massimiliano Panella1, Andrea Parisini3, Alessio Paschè1,2, Alberto Pau1,2, Anita Rebecca Pedrinelli1,2, Ilaria Percivale1,2, Roberta Re4, Cristina Rigamonti1,2, Eleonora Rizzi1,2, Andrea Rognoni2, Annalisa Roveta3, Luigia Salamina2, Matteo Santagostino2, Massimo Saraceno1,2, Paola Savoia1,2, Marco Sciarra3, Andrea Schimmenti3, Lorenza Scotti1, Enrico Spinoni1,2, Carlo Smirne1,2, Vanessa Tarantino1,2, Paolo Amedeo Tillio1,4, Rosanna Vaschetto1,2, Veronica Vassia1,2, Domenico Zagaria1,2, Elisa Zavattaro2, Patrizia Zeppegno1,2, Francesca Zottarelli1,2, Pier Paolo Sainaghi5,6.
Abstract
Clinical features and natural history of coronavirus disease 2019 (COVID-19) differ widely among different countries and during different phases of the pandemia. Here, we aimed to evaluate the case fatality rate (CFR) and to identify predictors of mortality in a cohort of COVID-19 patients admitted to three hospitals of Northern Italy between March 1 and April 28, 2020. All these patients had a confirmed diagnosis of SARS-CoV-2 infection by molecular methods. During the study period 504/1697 patients died; thus, overall CFR was 29.7%. We looked for predictors of mortality in a subgroup of 486 patients (239 males, 59%; median age 71 years) for whom sufficient clinical data were available at data cut-off. Among the demographic and clinical variables considered, age, a diagnosis of cancer, obesity and current smoking independently predicted mortality. When laboratory data were added to the model in a further subgroup of patients, age, the diagnosis of cancer, and the baseline PaO2/FiO2 ratio were identified as independent predictors of mortality. In conclusion, the CFR of hospitalized patients in Northern Italy during the ascending phase of the COVID-19 pandemic approached 30%. The identification of mortality predictors might contribute to better stratification of individual patient risk.Entities:
Mesh:
Year: 2020 PMID: 33244144 PMCID: PMC7692524 DOI: 10.1038/s41598-020-77698-4
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1The figure details the selection of the study population.
Figure 2Histogram frequency plot for days until death from hospitalization (panel A) or symptoms onset (panel B).
Figure 3In-hospital survival curve. The median in-hospital survival time is equal to 8 days (95% CI 7; 11).
Clinical features of the study population.
| Total (N. 407) | Discharged (N. 285) | Dead (N. 122) | ||
|---|---|---|---|---|
| 71 [58–80] | 65 [54–77] | 77 [72–85] | < 0.001 | |
| 239 (59)/168 (41) | 165 (58)/120 (42) | 74 (61)/48 (39) | 0.58 | |
| Arterial Hypertension (y/n) | 221 (58)/163 (42) | 138 (51)/133 (49) | 83 (73)/30 (27) | < 0.001 |
| Diabetes (y/n) | 89 (24)/280 (76) | 58 (22)/201 (78) | 31 (28)/79 (72) | 0.23 |
| Smoking (y/n) | 54 (17)/258 (83) | 30 (14)/191 (86) | 24 (26) /67 (74) | 0.007 |
| Ischemic cardiopathy (y/n) | 60 (16)/306 (84) | 32 (12)/225 (88) | 28 (26)/81 (74) | 0.002 |
| Obesity (y/n) | 60 (23)/200 (77) | 39 (20)/153 (80) | 21 (31)/47 (69) | 0.08 |
| COPD (y/n) | 37 (10)/329 (90) | 23 (9)/238 (91) | 14 (13)/91 (87) | 0.19 |
| Active Malignancy (y/n) | 33 (11)/277 (89) | 15 (7)/209 (93) | 18 (21)/68 (79) | < 0.001 |
| Chronic liver disease (y/n) | 13 (4)/351 (96) | 6 (2)/251 (98) | 7 (7)/100 (93) | 0.05 |
| Autoimmune disease (y/n) | 11 (3)/352 (97) | 6 (2)/251 (98) | 5 (5)/101 (95) | 0.23 |
| Atrial fibrillation (y/n) | 45 (14)/283 (86) | 26 (11)/212 (89) | 19 (21)/71 (79) | 0.02 |
| Interstitial lung disease (y/n) | 10 (3)/318 (97) | 6 (3)/231 (97) | 4 (4)/87 (96) | 0.38 |
| Dementia (y/n) | 56 (17)/273 (83) | 27 (11)/211 (89) | 29 (32)/62 (68) | < 0.001 |
| Chronic kidney disease (y/n) | 50 (15)/279 (85) | 22 (9)/215 (91) | 28 (30)/64 (70) | < 0.001 |
| Cough (y/n) | 209 (55)/168 (45) | 160 (59)/109 (41) | 49 (45)/59 (55) | 0.013 |
| Fever (y/n) | 234 (61)/149 (39) | 161 (60)/107 (40) | 73 (63)/42 (73) | 0.53 |
| Myalgia/fatigue (y/n) | 112 (31)/254 (69) | 85 (33)/175 (67) | 27 (25)/79 (75) | 0.17 |
| Headache (y/n) | 20 (6)/339 (94) | 15 (6)/239 (94) | 4 (4)/101 (96) | 0.67 |
| Hemoptysis (y/n) | 5 (1)/356 (99) | 3 (1)/253 (99) | 2 (2)/103 (98) | 0.59 |
| Diarrhea (y/n) | 55 (15)/306 (85) | 44 (17)/212 (83) | 11 (10)/94 (90) | 0.11 |
| Dyspnea (y/n) | 216 (56)/170 (44) | 131 (48)/141 (52) | 85 (75)/29 (25) | < 0.001 |
| Chest pain (y/n) | 20 (6)/341 (94) | 18 (7)/238 (93) | 2 (2)/103 (98) | 0.06 |
| Sore throat (y/n) | 9 (3)/306 (97) | 7 (3)/221 (97) | 2 (2)/85 (98) | 0.71 |
| Anosmia (y/n) | 17 (5)/296 (95) | 14 (6)/212 (94) | 3 (3)/84 (97) | 0.34 |
| Upper airway congestion (y/n) | 9 (3)/305 (97) | 7 (3)/219 (97) | 2 (2)/86 (98) | 0.69 |
| Body temperature (°C) | 37.5 [36.5–38.0] | 37.4 [36.5–38.0] | 37.6 [36.5–38.0] | 0.3 |
| Heart rate (per min) | 85 [75–98] | 84 [74–95] | 86 [76–100] | 0.12 |
| Respiratory rate (per min) | 20 [18–28] | 19 [16–23] | 26 [22–34] | < 0.001 |
| Systolic blood pressure (mmHg) | 124 [115–140] | 125 [115–140] | 120 [110–140] | 0.47 |
| Diastolic blood pressure (mmHg) | 70 [68–80] | 74 [70–80] | 70 [62–80] | 0.02 |
The main general features of study population are reported. Comparison between survivors and dead have been performed by a non-parametric Wilcoxon test or by the Chi-square test, as opportune. For abbreviation: M, males; F, females; y, yes; n, no; COPD, chronic obstructive pulmonary disease.
Figure 4Random forest variable importance plot. The variables have been ranked in order of relevance in predicting in-hospital mortality. The importance measure considered for the analysis is the mean decrease in accuracy computed via Random Forest Classification Algorithm. The Random forest model accuracy is equal to 82.5% achieved with 1000 trees and 3 mtry.
Multivariable models.
| Variable | OR | SE | |
|---|---|---|---|
| Age (58–80) | 6.1226 | 0.38552 | < 0.001 |
| Active malignacy | 4.6777 | 0.59049 | 0.009 |
| Obesity | 3.3966 | 0.43958 | 0.005 |
| Smoking | 2.7208 | 0.46454 | 0.031 |
| PF (285–137) | 5.78 | 0.58486 | 0.003 |
| Neutrophils (3.4–7.2) | 1.0612 | 0.2744 | 0.829 |
| Creatinine (0.73–1.14) | 1.1881 | 0.15147 | 0.255 |
| Neutrophils (3.4–7.2) | 1.209 | 0.33061 | 0.566 |
| PF (285–137) | 8.03 | 0.84283 | 0.013 |
| Smoking | 3.7057 | 0.97641 | 0.18 |
| Age (58–80) | 7.0326 | 0.92655 | 0.035 |
| Dementia | 1.4516 | 0.8434 | 0.659 |
| Active malignancy | 17.688 | 1.2803 | 0.025 |
Multivariable logistic regression estimates according to prediction Sets. Odds ratio (OR) with standard error (SE) and p values (p) have been reported. The .632 bootstrap (1000 resamples) Harrell-C statistics corrected for over-optimism is also reported.
Laboratory characteristics of the study population.
| Total (N. 256) | Discharged (N. 161) | Dead (N. 55) | ||
|---|---|---|---|---|
| White blood cells (103/ul) | 6.5 [5.1–9.5] | 6.3 [5.1–9.1] | 7.5 [5.4–11.7] | 0.07 |
| Neutrophils (103/ul) | 4.6 [3.4–7.3] | 4.5 [3.4–6.3] | 6.4 [3.7–9.4] | 0.01 |
| Lymphocytes (103/ul) | 1.1 [0.8–1.5] | 1.2 [0.9–1.6] | 0.9 [0.6–1.3] | < 0.001 |
| Hemoglobin (gr/dl) | 13.6 [12.1–14.8] | 13.9 [12.5–14.8] | 13.3 [11.4–14.5] | 0.14 |
| Platelets (103/ul) | 188 [153–238] | 197 [157–246] | 159 [120–234] | 0.01 |
| Creatinine (mg/dl) | 0.88 [0.73–1.14] | 0.84 [0.72–1.06] | 1.12 [0.86–1.77] | < 0.001 |
| eGFR (ml/min) | 83 [68–104] | 90 [73–107] | 70 [44–80] | < 0.001 |
| ALT (UI/l) | 31 [20–49] | 32 [21–50] | 30 [18–41] | 0.19 |
| LDH (UI/l) | 623 [518–856] | 601 [492–725] | 706 [596–1168] | 0.03 |
| Potassium (mEq/l) | 4.0 [3.7–4.4] | 4.0 [3.7–4.4] | 4.1 [3.8–4.7] | 0.09 |
| C-reactive protein (mg/dl) | 7.1 [2.5–14.6] | 4.5 [1.8–9.8] | 14.4 [8.3–16.4] | 0.01 |
| D-dimer (µg/ml) | 956 [541–1639] | 919 [521–1593] | 1356 [878–1688] | 0.11 |
| P/F ratio | 223 [138–285] | 246 [184–300] | 126 [100–202] | < 0.001 |
eGFR estimated glomerular filtration rate, ALT alanine aminotransferases, LDH lactate dehydrogenases, P/F PaO2/FiO2 ratio, COPD chronic obstructive pulmonary disease.
Area under curve (AUC) estimation for the multivariable significant continuous death predictors.
| AUC | 95% CI lower | 95% CI upper | |
|---|---|---|---|
| Age | 0.75 | 0.71 | 0.80 |
| PF | 0.78 | 0.69 | 0.87 |