Rafał Białek1, Kalyani Thakur2, Adrian Ruff3, Michael R Jones4, Wolfgang Schuhmann3, Charusheela Ramanan2, Krzysztof Gibasiewicz1. 1. Faculty of Physics, Adam Mickiewicz University, Poznań, ul. Uniwersytetu Poznańskiego 2, 61-614 Poznań, Poland. 2. Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany. 3. Analytical Chemistry-Center for Electrochemical Sciences, Faculty of Biochemistry and Chemistry, Faculty of Biochemistry and Chemistry, Ruhr-University Bochum, Universitätsstrasse 150, D-44780 Bochum, Germany. 4. School of Biochemistry, Biomedical Sciences Building, University of Bristol, University Walk, Bristol BS8 1TD, U.K.
Abstract
Biohybrid photoelectrochemical systems in photovoltaic or biosensor applications have gained considerable attention in recent years. While the photoactive proteins engaged in such systems usually maintain an internal charge separation quantum yield of nearly 100%, the subsequent steps of electron and hole transfer beyond the protein often limit the overall system efficiency and their kinetics remain largely uncharacterized. To reveal the dynamics of one of such charge-transfer reactions, we report on the reduction of Rhodobacter sphaeroides reaction centers (RCs) by Os-complex-modified redox polymers (P-Os) characterized using transient absorption spectroscopy. RCs and P-Os were mixed in buffered solution in different molar ratios in the presence of a water-soluble quinone as an electron acceptor. Electron transfer from P-Os to the photoexcited RCs could be described by a three-exponential function, the fastest lifetime of which was on the order of a few microseconds, which is a few orders of magnitude faster than the internal charge recombination of RCs with fully separated charge. This was similar to the lifetime for the reduction of RCs by their natural electron donor, cytochrome c2. The rate of electron donation increased with increasing ratio of polymer to protein concentrations. It is proposed that P-Os and RCs engage in electrostatic interactions to form complexes, the sizes of which depend on the polymer-to-protein ratio. Our findings throw light on the processes within hydrogel-based biophotovoltaic devices and will inform the future design of materials optimally suited for this application.
Biohybrid photoelectrochemical systems in photovoltaic or biosensor applications have gained considerable attention in recent years. While the photoactive proteins engaged in such systems usually maintain an internal charge separation quantum yield of nearly 100%, the subsequent steps of electron and hole transfer beyond the protein often limit the overall system efficiency and their kinetics remain largely uncharacterized. To reveal the dynamics of one of such charge-transfer reactions, we report on the reduction of Rhodobacter sphaeroides reaction centers (RCs) by Os-complex-modified redox polymers (P-Os) characterized using transient absorption spectroscopy. RCs and P-Os were mixed in buffered solution in different molar ratios in the presence of a water-soluble quinone as an electron acceptor. Electron transfer from P-Os to the photoexcited RCs could be described by a three-exponential function, the fastest lifetime of which was on the order of a few microseconds, which is a few orders of magnitude faster than the internal charge recombination of RCs with fully separated charge. This was similar to the lifetime for the reduction of RCs by their natural electron donor, cytochrome c2. The rate of electron donation increased with increasing ratio of polymer to protein concentrations. It is proposed that P-Os and RCs engage in electrostatic interactions to form complexes, the sizes of which depend on the polymer-to-protein ratio. Our findings throw light on the processes within hydrogel-based biophotovoltaic devices and will inform the future design of materials optimally suited for this application.
Research into biohybrid
solar energy conversion devices has expanded
significantly over the past couple of decades, with a wide variety
of device designs reported.[1−6] The biological component has usually been a photosynthetic protein
such as photosystem I, photosystem II, or the reaction center (RC)
from a purple photosynthetic bacterium; however, recently, there has
been an increase in the usage of whole living organisms such as cyanobacteria
immobilized directly on electrodes.[5] A
wide variety of nonbiological components have been used as electrode
substrates and electron acceptors or donors, including inorganic semiconductors,
metals,[7,8] conductive polymers, and redox polymers.
In addition to their sustainability, natural photosystems are attractive
materials for solar energy conversion because of the very high quantum
yields (event per photon absorbed) of both excitation energy transfer
among their light-harvesting pigments and photochemical charge separation
within the RC component. The benefit of high yield of charge separation
is sustained by the rapid reduction of the redox center carrying the
electron hole by an external donor, preventing wasteful charge recombination
within the RC.[9]A photoprotein that
has been used extensively for the fabrication
of biohybrid electrodes and devices is the RC from the purple bacterium Rhodobacter sphaeroides. This relatively simple RC
conducts charge separation with a quantum yield of nearly 100%.[10] This functionality is provided by a set of cofactors
buried inside an amino acid scaffold, namely, four bacteriochlorophylls
(BChl; two of them are coupled in a so-called special pair and form
the primary electron donor (P) and two are accessory BChls, BA and BB), two bacteriopheophytins (BPhe; HA and HB), two quinones (QA and QB), and one carotenoid (Car; see Figure A).[11] The absorption
spectrum of the RC is characterized by bands that are attributed to
different chromophores (Figure B). This allows for distinct spectral signatures in transient
absorption (TA) spectroscopy, facilitating the analysis of photophysical
pathways. The chromophores form two quasi-symmetric branches (A and
B), but only one (branch A) is active in an electron-transfer process
(Figure A). After
light absorption, the excitation energy within the RCs is typically
transferred to P, forming the excited state P*. This triggers charge
separation, resulting in the state P+HA–. In this situation, the next step depends on the state
of RCs, described in the literature as “open” or “closed”.[12] Open RCs are those with all cofactors in their
neutral state and thus able to conduct charge through the protein.
In closed RCs, the electron transfer is blocked beyond HA, either by reduction of QA or its removal. In the closed
state, the only possibility for the separated charges on P+ and HA– is to recombine. Usually, they
relax back to the ground state of P, but there is also a low probability
that a triplet excited state (TP) can be formed (with a
15% yield in wild-type purified RCs[13−15]), leading finally to
the formation and decay of a TCar state. On the other hand,
in open RCs, the electron from HA– is
transferred to QA within ∼200 ps, resulting in the
P+QA– state (which can recombine
to the ground neutral state PQA within ∼100 ms),
and next from QA– to QB within
∼100–1000 μs, resulting in the P+QB– state (which can recombine to the state
PQB within ∼1 s). If the QB site is not
occupied by a quinone in the purified RC, the final charge-separated
state is P+QA–.[12,16]
Figure 1
(A)
Schematic of a possible complex of an RC and P-Os chains with
an electron flow pathway. Os complexes are marked as blue dots in
the zoomed-out view. (B) Steady-state absorption spectra of P-Os and
RCs in a solution with band attributions. The 365 nm excitation wavelength
is marked by a purple line.
(A)
Schematic of a possible complex of an RC and P-Os chains with
an electron flow pathway. Os complexes are marked as blue dots in
the zoomed-out view. (B) Steady-state absorption spectra of P-Os and
RCs in a solution with band attributions. The 365 nm excitation wavelength
is marked by a purple line.The converted energy made available to Rba. sphaeroides through highly quantum-efficient charge separation within its RCs
is secured by transferring the separated electron and hole to external
acceptors and donors before they can recombine. The reduced quinone
dissociates from the QB pocket in RC and is replaced by
an oxidized quinone from an intramembrane pool, while the electron
hole is transferred from P+ to a water-soluble cytochrome c2 (cyt c2). This
latter reaction is possible due to the formation of a transient complex
between an RC and cyt c2 mediated largely
by electrostatic interactions.[17,18] Within this complex,
cyt c2 is oxidized on a ∼1 μs
time scale.[19−23] This is several orders of magnitude faster than internal P+(QAQB)− charge recombination
in open RCs (0.1–1 s), stabilizing a high yield of charge separation.Although a great deal is known about the kinetics, energetics,
and structural bases of individual steps of charge separation and
stabilization in Rba. sphaeroidesRCs
in solution, native membranes, and cells, very little detail is known
about how these proteins operate on electrodes or in device settings.
In general, only macroscopic parameters such as photocurrents and
photovoltages have tended to be reported for RC biohybrid systems,[1,2,24] and to date, only a few attempts
have been made to model the electron-transfer mechanism in such devices.[25−27] Precise modeling requires knowledge of the various parameters of
the system, some of which can be accessed by employing electrochemical[24] or steady-state spectroelectrochemical[28] methods. However, the electron-transfer rate
between the protein and the immediate external donor or acceptor has
not yet been studied in detail. Transient absorption (TA) spectroscopy
is the ideal tool for characterizing the rates of photoinduced electron-transfer
reactions and has already been extensively used for the study of photoinduced
charge separation and recombination dynamics in photosynthetic systems
as well as in synthetic materials for solar energy conversion.[29−35]Os-complex-modified redox polymers (P-Os) have been found
to effectively
wire photoactive proteins such as photosystem I,[36−38] photosystem
II,[36,39−41] and Rba.
sphaeroidesRCs[28] to electrode
surfaces. An efficient electron transfer within these systems is possible
due to the proper redox potential of the P-Os. Moreover, when the
protein is immobilized in the polymer matrix it can stabilize the
protein complex and enhance its lifetime.[39,40] An intimate contact between the oppositely charged proteins and
polymers can be achieved using charged polymer matrices, favoring
a good electron exchange due to short electron pathways between an
enzyme and a redox polymer.[42−44] Moreover, in addition to ensuring
a good interaction with the enzyme, the positively or negatively charged
groups within the redox polymer enable good water solubility and a
high concentration of freely diffusing polymer chains in an aqueous
media. This effect is used for the production of redox polymer-based
aqueous flow batteries with high charge densities.[45] In this work, we have used a polymer with a mainly positive
charge at pH 8 (see Figure A), which in principle is well suited to interaction with
mainly negatively charged RCs. Moreover, Os-complex-modified redox
polymers show absorption properties that are outside the main absorption
region of the Rba. sphaeroidesRC,
and thus, they can be distinguished spectroscopically (Sokol et al.,
2018; Figure B).A combination of the P-Os polymer and Rba. sphaeroidesRCs in a biophotoelectrode architecture has already been shown to
give a relatively high internal quantum efficiency (∼50%) of
photon to electron conversion.[28] This number
implies a very good electrical contact between the P-Os and RCs immobilized
inside this polymer matrix. For the present contribution, the dynamics
and mechanism of the electron transfer between P-Os and bacterial
RCs that underlies the high observed efficiency are explored. Since
transient optical signals from the thin layer of a biophotoelectrode
are extremely low; instead, we have investigated mixtures of P-Os
and RCs suspended in the solution. TA spectroscopy has been used to
demonstrate effective electron transfer between RCs and P-Os in the
solution, the kinetics of which depend strongly on the molar concentration
ratio between the P-Os and RCs. Steady-state experiments have also
been conducted to understand the nature of the interaction between
the proteins and polymer chains at different molar ratios.
Experimental
Section
Purification of RCs
His10-tagged Rba. sphaeroidesRCs were purified as described in
detail previously[46,47] using N,N-dimethyldodecan-1-amine oxide (LDAO; Sigma-Aldrich) as
the solubilizing detergent and a combination of nickel affinity chromatography
and size exclusion chromatography. Purified RCs were stored at −60
°C in 20 mM Tris (pH 8.0)/0.1% LDAO.
Polymer Synthesis
Syntheses of positively charged redox-silent
polymer poly(vinyl imidazole-co-trimethyl aminoethyl
methacrylate) (dubbed PVI; see Figure S1) and Os-complex-based redox polymerpoly(vinyl imidazole-co-ally amine)-[Os(II)(bpy)2Cl]+ (dubbed
P-Os) were as described previously.[48,49]
Solution Preparation
Samples for TA measurements were
prepared in a quartz cuvette with a 2 mm optical path length (Gallab)
from stock solutions diluted in 20 mM Tris (pH 8.0)/0.1% LDAO directly
prior to the TA experiment. Stock solutions used were 10.0 ±
0.8 mg/mL polymer (either P-Os or PVI), 20.9 ± 1.4 mg/mL RCs,
15 mM 2,3-dimethoxy-5-methyl-p-benzoquinone (Q0; Sigma-Aldrich), and 1 M sodium ascorbate (Sigma-Aldrich).
Five experimental samples (named I–V) were prepared from stock
solutions of RCs, P-Os, and Q0, along with several control
samples, as detailed in Table . Where present, the concentration of Q0 was kept
constant at around 1.5 mM to enable efficient electron acceptance
from RCs.[28] More detailed information on
the sample composition and preparation is given in Section S2 of the SI.
Table 1
Sample Compositions
final concentration
sample (P-Os/RC)a
RCs (μM)
polymer chains (μM)
Os complexes
(μM)
Q0 (mM)
ascorbate
(mM)
I (3.1:1)
1.52 ± 0.10
4.7 ± 0.7
141 ± 17
1.48
II (1.23:1)
1.54 ± 0.10
1.9 ± 0.29
56 ± 7
1.48
III (0.64:1)
1.55 ± 0.10
0.99 ± 0.15
29.4 ± 3.6
1.49
IV (6.4:1)
0.75 ± 0.05
4.8 ± 0.7
142 ± 17
1.49
V (1.25:1)
3.76 ± 0.25
4.7 ± 0.7
139 ± 17
1.51
RCs only
3.43 ± 0.22
RCs + ascorbate
4.54 ± 0.30
9.7
RCs + P-Os
2.28 ± 0.15
3.9 ± 0.6
115 ± 14
RCs + PVI + Q0
1.52 ± 0.10
?b
1.48
P-Os
only
5.3 ± 0.8
158 ± 19
P-Os + Q0
4.04 ± 0.26
1.50
Q0 only
1.53
Values in parentheses
are the molar
ratios of P-Os to RCs.
Unknown
due to unknown polymer molecular
weight.
Values in parentheses
are the molar
ratios of P-Os to RCs.Unknown
due to unknown polymer molecular
weight.Solutions for steady-state
experiments with centrifugation were
prepared as for samples I–V for TA measurements but without Q0 (the same amount of
pure H2O was used instead).
Steady-State Experiments
Steady-state absorption measurements
were conducted using a Jasco V-770 spectrophotometer with an integrating
sphere (ILN-925) in the same cuvette as used for TA measurements.
Centrifugation was performed in 1.5 mL Eppendorf tubes in an Eppendorf
MiniSpin centrifuge at 8000 rpm for 10 min. Absorbance spectra of
polymer/protein mixtures were fitted with the sum of spectra of the
P-Os and RC components with correction for scattering[50] to deconvolve their contribution using a script written
in Python using the scipy.optimize module.[51]
Transient Absorption
TA experiments were conducted
using the EOS extension in a Helios Fire pump-probe apparatus (Ultrafast
Systems), paired with a regeneratively amplified 1030 nm laser (Light
Conversion, Pharos, 200 fs). The effective laser repetition rate was
set via an internal pulse picker. The pump (photoexcitation) pulse
was generated with an optical parametric amplifier (Light Conversion,
Orpheus-F). The broadband probe light was generated via a photonic
crystal fiber (instrument response function ( IRF) <1 ns). The
parameters were as follows (if not stated otherwise): excitation wavelength,
365 nm; repetition rate, 100 Hz (and thus the time window ∼10
ms), and the excitation energy per pulse was 0.35 μJ (see Figure S6 for the amplitude vs excitation energy
plot). Sample solutions were stirred with a magnetic stir bar at the
slowest possible speed to provide a fresh sample between laser pulses.The raw absorbance change data were fitted using Glotaran software
for global analysis.[52,53] The resulting fitting function
was the followingwhere ΔA(λ, t) is the
fit of absorbance change at wavelength λ
and time t, A(λ) is the ith preexponential factor,
τ is the ith lifetime
component, and n is the number of exponential components.
Thus, for each wavelength, the absorbance change kinetics were fitted
with the sum of exponential decay functions, but the lifetimes were
shared among all wavelengths. The analysis yielded a set of spectra
of preexponential factors, A(λ), associated with particular lifetimes. These spectra
are referred to as decay-associated difference spectra (DADS).
Results
and Discussion
Evidence of Electron Transfer from the Polymer
to Protein in
Solution
The application of TA spectroscopy on a millisecond
time scale to RCs in buffer without any additional components produced
a P+/P difference spectrum. This had distinctive negative
signals at around 870 and 600 nm attributable to the bleach of P ground-state
absorbance and electrochromic blue and red shifts at around 800 and
760 nm coming from the accessory BChls and BPhes, respectively (Figure S2). The apparent shortening of the lifetime
of the P+ state obtained in this paper (11 ms) in comparison
to lifetimes from the literature (∼100 ms in the absence and
∼1 s in the presence of QB[12]) was likely due to the depletion of RCs in the charge-separated
state in the small focal volume of the laser beam. This was caused
by stirring that moved photoexcited proteins out of the focal volume
(see Figure S3 for comparison).The
addition of sodium ascorbate to the solution of RCs causes their closing
by the formation of reduced QA (QA–). The occurrence of this was evidenced (Figure S5) by the appearance of faster decay components attributable
to P+HA– charge recombination
(on the order of ∼10 ns[54,55]) and TCar
formation and decay (nanoseconds and microseconds, respectively[56,57]).The addition of P-Os (reduced form, Os(II)-species) to the
solution
of RCs rather than ascorbate resulted in spectra and lifetimes (Figure S6) that were similar to those obtained
with ascorbate (Figure S5). As P-Os alone
did not show any TA signals in the studied time range (not shown),
we conclude that the P-Os is able to reduce P+ in the RC,
creating a closed state. This observation is novel, as so far this
kind of process was observed only in RC- or photosystem I-based biohybrid
electrodes but not in a mixture of proteins and polymers in solution.[28,36−38] It validates that P-Os and RCs are properly paired
for electron transfer between them, suggesting good pairing also while
immobilized on the electrode. However, it is important to note that
immobilization can change the properties of the material, such as
redox potentials;[28] thus, in situ methods
should be used on biohybrid devices for final verification. The fully
reduced initial state of the P-Os and a concentration of species were
favorable for the reduction of RCs by P-Os (there are at least 20
times more Os complexes than RCs in solutions; Table S3). However, this reduction leads to the closing of
RCs prior to the TA experiment so it is impossible to measure its
rate in the described type of experiment. An equivalent experiment
with the PVI backbone polymer, which acts as a redox-silent mimic
for P-Os, did not produce nanosecond/microsecond decay components
(Figure S4) and showed only RC charge recombination
occurring on the millisecond time scale as in the absence of ascorbate
(Figure S2).To measure the kinetics
of electron transfer from the P-Os to P+, it was necessary
to keep RCs in their open state to get
a long enough lifetime of the P+ state (∼100 ms
in open RCs vs ∼10 ns in closed RCs). To keep RCs in their
open state, the excess electrons have to be taken away from QA– by adding an external electron acceptor.
The addition of water-soluble ubiquinone (Q0) allowed the
following reaction to be monitoredThe water-soluble Q0 has already
proven its usefulness in biohybrid devices as an electron acceptor
from the Q-side of RCs, replacing naturally functioning ubiquinone-10
within the membrane.[58] Its usefulness comes
from the fact that quinone reduction is coupled with protonation;
thus, its reaction with a bare electrode is relatively inefficient,
while its interaction with RCs is fast due to its specific (enzymatic)
nature.[59]The presence of Q0 in the solution alone or with the
P-Os did not give any TA signals in the studied time range.
Kinetics
of Electron Transfer from the Polymer to Protein
Mixtures
of RCs, P-Os, and Q0 were prepared at five
different molar ratios of P-Os/RC (Table ). For all samples, the difference spectrum
just after laser excitation resembled that of oxidized P (in the charge-separated
state P+(QAQB)−; Figure S2) and the spectrum then evolved
over time. To observe the kinetics of the P+ decay, band
integrals (kinetics of the raw TA signal integrated over selected
wavelength range) were calculated in the range 830–950 nm,
corresponding to the bleach of P ground-state absorption (Figure ). Band integrals
(BIs) were used instead of single wavelength kinetics to increase
the signal-to-noise ratio. For data that were not normalized (Figure A), the starting
amplitude of the signal depended on the concentration of RCs, while
the shape of the decay curve also depended on the concentration of
P-Os. After normalizing to the initial signal amplitude (Figure B), it was evident
that for all concentrations of P-Os the decay was faster than that
for a reference sample without P-Os electron donor. Moreover, a faster
rate of decay of P+ exhibited a direct correlation with
a higher concentration of P-Os and an opposite correlation with the
increasing concentration of RCs, suggesting that P+ decay
was caused due to its reduction by the P-Os.
Figure 2
(A) Band integral (BI)
kinetics for the first 1 ms. Band integrals
were constructed in the 830–950 nm range. (B) Same data normalized
to −1 at minimum. Values in the legend represent rounded molar
concentrations of RCs and P-Os (in μM unit; for exact values,
see Table ). Kinetics
reveal rates of electron transfer from the polymer to the protein.
(A) Band integral (BI)
kinetics for the first 1 ms. Band integrals
were constructed in the 830–950 nm range. (B) Same data normalized
to −1 at minimum. Values in the legend represent rounded molar
concentrations of RCs and P-Os (in μM unit; for exact values,
see Table ). Kinetics
reveal rates of electron transfer from the polymer to the protein.TA spectra averaged over a 4–6 ms delay
revealed which species
remained at the end of the period monitored (Figure , spectra at other delays are shown in Figures S8–S12). For most samples, the
main features were negative signals centered at ∼520 and ∼740
nm. These can be attributed to bleaches arising from the oxidation
of Os(II) to Os(III) in the P-Os.[28] The
exception was sample III, which had the lowest concentration of P-Os
and the lowest ratio of Os complexes per RC. The spectrum of this
sample showed a mixture of RC and P-Os signals (compare it to pure
RC signal in the sample with PVI, Figure ). The data confirmed the hypothesis that
there is electron transfer from the Os complexes in the polymer to
P+ in the RCs, showing that nearly 100% of photoexcited
RCs, which were in an open state before the excitation flash, could
be reduced provided that the relative concentration of Os complexes
was sufficiently high. If it was not, then P+ reduction
was inefficient, either because the electron transfer was not that
efficient under these conditions or it was slower than the time window.
Under the conditions of the TA experiment, the signal completely vanished
within 10 ms due to the excited species gradually escaping from the
observed focal volume of the sample, hampering the resolution of slow
reduction processes.
Figure 3
Averages of transient absorption spectra at delay times
of 4–6
ms. The averaged spectrum for the PVI sample (redox-silent polymer)
was scaled to match the sample III spectrum in the long-wavelength
region to show its polymer and RC (P/P+) contributions
in the latter spectrum. All of the remaining spectra are dominated
by the signal from the polymer. Averaging over the 4–6 ms window
was performed to improve the signal-to-noise ratio.
Averages of transient absorption spectra at delay times
of 4–6
ms. The averaged spectrum for the PVI sample (redox-silent polymer)
was scaled to match the sample III spectrum in the long-wavelength
region to show its polymer and RC (P/P+) contributions
in the latter spectrum. All of the remaining spectra are dominated
by the signal from the polymer. Averaging over the 4–6 ms window
was performed to improve the signal-to-noise ratio.
Kinetic Phases of Electron Transfer from the Polymer to Protein
Global analysis produced sets of DADS and associated lifetimes.
Shapes of DADS were similar for samples I, II, IV, and V, differing
mainly in amplitude. A representative set for sample I are shown in Figure , and the remainder
is shown in Figures S13–S16. The
best fit was obtained from a four-exponential model with all lifetimes
set to be free. The three fastest DADSs were similar in shape to one
another and corresponded well to the P/P+ difference spectrum.[28] The slowest DADS represented the escape of the
excited sample from the laser focal volume rather than the real decay
of an observed state. In general, this escape is not a simple exponential
function but a single exponential was sufficient to fit the data at
the present level of noise. Thus, the slowest component can be treated
as a nondecaying signal left after former reactions and showed mostly
photobleaching of ground-state P-Os absorbance, suggesting that the
three faster DADS should include features of the P-Os oxidation process.
For sample III (Figure S14), this fitting
procedure did not give a fully acceptable result, as the two slowest
components clearly compensated one another. However, when fewer exponential
components were used, the fitting seemed to omit the P-Os signal completely
(not shown). The compensation for the two slowest DADS suggests that
the lifetime of the electron transfer, in this case, was very similar
to that of the photoexcited part of the sample escaping the focal
volume (i.e., ∼4–5 ms). Thus, for this sample, the amplitudes
of the two slowest DADS were not suitable for further analysis.
Figure 4
DADS for sample
I and associated lifetimes. Individual spectra
contain contributions from the protein and/or polymer.
DADS for sample
I and associated lifetimes. Individual spectra
contain contributions from the protein and/or polymer.To look for a contribution of P-Os oxidation in the first
three
DADS, the P/P+ differential spectrum in the form of the
DADS from the RC-only sample (Figure S2) was subtracted from all of them. This P/P+ differential
spectrum was scaled in amplitude such that the signal in the resulting
difference spectra in the range 780–900 nm was as close to
zero as possible (for verification of this, see Figures S21–S25). It was achieved using a script written
in Python using the scipy.optimize module.[51] The resulting “ΔDADS” for sample I is shown
in Figure , and for
the remainder, see Figures S17–S20. The fastest ΔDADS had a maximum at around 600 nm and was
slightly negative at 500 nm. It resembled the shape of the difference
spectrum expected for Car triplet decay (see Figure S5 for comparison) with the possible addition of some oxidation
of P-Os, causing a shallowing of the ∼500 nm valley visible
in Figure S5. The reason why a TCar state was observed is likely to be because the added Q0 might not be fully efficient in accepting electrons from the Q-side
of RCs between laser shots, leading to the formation of TCar in closed RCs in the state PQA–.
Moreover, it is conceivable that access of Q0 to the Q-side
of the protein in some RCs may have been locked by the adsorbed polymer
(see below). Accordingly, the fastest ΔDADS is attributed to
a mixture of TCar decay (expected lifetime ∼2.5–4
μs)[56,57] and P-Os → P+ electron
transfer. However, the main amplitude of this decay lies in the >750
nm region, where the signal comes almost exclusively from P/P+, and thus, P-Os → P+ electron transfer
has the dominating contribution to this lifetime. Taking into account
equivalent details for the remaining samples (Figures S17–S20), it is concluded that the fastest
electron transfer from P-Os to P+ occurred on the time
scale of 0.5–5 μs. The next two ΔDADS with lifetimes
of 20 and 245 μs in Figure had a prominent positive amplitude at around 515 nm
attributable to the formation of the oxidized state of P-Os. The slowest
ΔDADS, attributed to the sample escaping the focal volume, matched
the spectral signature of loss of oxidized P-Os, also consistent with
electron transfer from P-Os to P+, occurring over a microsecond
time scale.
Figure 5
ΔDADS for sample I obtained by subtracting RC contributions
from the DADS in Figure . Subtraction was performed primarily to reveal the formation of
the oxidized form of the polymer.
ΔDADS for sample I obtained by subtracting RC contributions
from the DADS in Figure . Subtraction was performed primarily to reveal the formation of
the oxidized form of the polymer.
Mechanism of Electron Transfer from the Polymer to Protein
The sample compositions allowed exploration of the dependence of
the electron-transfer rates on the concentrations of both RCs and
P-Os (Figure ). At
a fixed concentration of P-Os (Figure A), a higher concentration of RCs resulted in a lower
rate constant (slower electron transfer). At a fixed concentration
of RCs (Figure B),
a higher concentration of P-Os gives an opposite effect with a higher
rate constant (faster electron transfer). As shown in Figure C, the rate of all three components
of the electron transfer accelerated as the ratio of P-Os/RC increased.
Figure 6
Dependence
of electron-transfer rate constants (reciprocals of
lifetimes) on (A) concentrations of RCs for a constant concentration
of P-Os, (B) concentration of P-Os for a constant concentration of
RCs, and (C) molar ratio of P-Os chains to RCs. Note that all rate
constants increase with increasing ratio of the polymer to protein
concentrations.
Dependence
of electron-transfer rate constants (reciprocals of
lifetimes) on (A) concentrations of RCs for a constant concentration
of P-Os, (B) concentration of P-Os for a constant concentration of
RCs, and (C) molar ratio of P-Os chains to RCs. Note that all rate
constants increase with increasing ratio of the polymer to protein
concentrations.Analysis of the amplitudes associated
with the DADS (Figure A) showed that there was an
increase in the relative contribution of the two faster components
with increasing P-Os/RCs molar ratio, thus accelerating the overall
process. There are two possible descriptions of this behavior.
Figure 7
(A) Relative
contributions of the three DADS components from TA
experiments to the overall process as a function of the molar ratio
of P-Os/RC. (B) Relative amount of RCs in the precipitate and supernatant,
determined from steady-state absorption measurements on centrifuged
samples, as a function of the molar ratio of P-Os/RC. (C). Relative
amount of P-Os in the precipitate and supernatant, determined from
steady-state absorption measurements on centrifuged samples, as a
function of the molar ratio of P-Os/RC. (D, E) Schemes of complex
formation for lower and upper limits of polymer-to-protein ratios
(see the text for details). Note that the higher the polymer-to-protein
ratio, the stronger the effect of complexes formation (B–E).
(A) Relative
contributions of the three DADS components from TA
experiments to the overall process as a function of the molar ratio
of P-Os/RC. (B) Relative amount of RCs in the precipitate and supernatant,
determined from steady-state absorption measurements on centrifuged
samples, as a function of the molar ratio of P-Os/RC. (C). Relative
amount of P-Os in the precipitate and supernatant, determined from
steady-state absorption measurements on centrifuged samples, as a
function of the molar ratio of P-Os/RC. (D, E) Schemes of complex
formation for lower and upper limits of polymer-to-protein ratios
(see the text for details). Note that the higher the polymer-to-protein
ratio, the stronger the effect of complexes formation (B–E).
Collisional Model
The simplest description of the electron-transfer
reaction would be collisional interactions of RCs with aggregates
of P-Os of different sizes or structures, producing different electron-transfer
rates. For this type of interaction, the kinetics of electron transfer
would be governed by eq During the reaction, the concentration of
P-Os(II) remained almost constant (the amplitude of the slowest DADS
was no more than 0.5% of the amplitude of the steady-state absorbance
of P-Os). Thus, this reaction can be treated as a pseudo-first-order
with the apparent first-order rate constant (kapp) given by eq .Although this would explain the dependence
of the electron-transfer rate on the concentration of P-Os, it does
not explain its dependence on the concentration of RCs. This indicates
that there must be interactions other than collisions occurring, such
as the creation of quasi-stable complexes between RCs and P-Os in
solution.
Complexing Model
Electron donation
to P+ in RCs in solution has been studied in depth for
the natural electron
donor, cyt c2, and has been reported to
be biexponential.[19−23,60] To account for this, a model
incorporating the creation of semistable complexes has been proposed.[19,22] The faster component (lifetime ∼1 μs) was attributed
to the electron-transfer rate within an RC/cyt c2 complex, while the slower component was attributed to the
diffusion-limited creation of complexes convolved with direct electron
transfer. The finding that the faster component of reduction of P+ by cyt c2 was independent of
concentration is in contrast with our findings for the RC/P-Os system.
Moreover, it was reported that the rate of P+ reduction
increased with increasing cyt c2 concentration
and increased with the concentration of RCs, which is opposite to
the effect observed in the present paper.[22,23,60] Thus, the model constructed for cyt c2 cannot be directly used in the system with
P-Os and RCs. However, it is interesting to note that the fastest
lifetime for electron transfer between RCs and P-Os is of the same
order as that for RCs and cyt c2. This
informed the hypothesis that RCs create complexes with P-Os and at
least some of them are as efficient in electron donation as natural
cytochrome c2. The similar behavior of
all lifetimes (Figure ) suggests that they arise from complexes with different compositions
that produce different electron-transfer rates.To examine whether
complexes form between RCs and P-Os, mixtures were centrifuged at
8000 rpm for 10 min, a treatment that resulted in part of both the
RC and P-Os population being spun down from the solution. This indicated
that, in all samples, there had been the formation of complexes large
enough to be centrifuged out. The fraction of both RCs and P-Os to
be pelleted increased as the molar ratio of P-Os/RC increased (Figure B,C), suggesting
that more or larger complexes had been formed. The finding that higher
concentration ratios also produced a decrease in the contribution
of the slowest component of the electron transfer (Figure A) suggests that such conditions
produce more complexes with a favorable orientation of P-Os and RCs.There remains a question about the nature of complexes formed between
RCs and the P-Os. The interaction between the RC and cyt c2 is primarily electrostatic with the cytochrome being
positively charged and its binding site on the RC negatively charged[17,18] under native pH conditions (pH 8; Figure ). The charge of the P-Os is determined by
the states of its component groups in its structure (Figure A). Os complexes remain positively
charged independently of the pH of the solution. However, it has been
reported that at pH 8 most of the imidazole and primary amino groups
remain in an unprotonated, uncharged state.[37] Thus, P-Os is mainly positively charged at pH 8 due to the presence
of positively charged Os complexes. It is known that P-Os has a tendency
to form loosely bound agglomerates in solution at pH 6.5, with the
smallest particles being on the order of 16 nm in radius.[40] It was also reported that for pH ≥7,
films made of P-Os collapse.[37] Thus, in
the conditions studied in this paper, P-Os entities exist most probably
as particles with a hydrodynamic radius of no longer than 16 nm, or
loosely bound agglomerates of such particles, and are positively charged.
This would be consistent with net anionic RCs and cationic P-Os particles
forming complexes through electrostatic interactions.
Figure 8
Distribution of the surface
charge on RCs at pH 8.0. The simulation
was done using PDB2PQR and APBS software with the 1PCR structure from
PDB[61] at default settings.[62,63] Negatively charged surfaces preferentially interact with the polymer.
Distribution of the surface
charge on RCs at pH 8.0. The simulation
was done using PDB2PQR and APBS software with the 1PCR structure from
PDB[61] at default settings.[62,63] Negatively charged surfaces preferentially interact with the polymer.For cyt c2, an additional
factor contributing
to the formation of a complex with RCs in the proper mutual orientation
is the shape of the protein. The cytochrome binds in a highly specific
manner to a site on the periplasmic side (P-side) of the RC that has
a complementary shape and charge. For a polymer, this shape factor
is more random, and it is conceivable that P-Os could attach to any
part of the RC protein on either the P-side or Q-side that has a suitable
surface charge (Figure ). The most optimal interaction would be one where a P-Os attached
to the P-side of the RC with one of its Os complexes as close as possible
to the P bacteriochlorophylls on the surface of the protein. The least
optimal attachment would be at the Q-side, producing very slow electron
transfer that would compete poorly with charge recombination internal
to the RC. In addition, binding of P-Os to the Q-side could conceivably
hamper access of the Q0 electron acceptor to the QB pocket. Enhanced recombination would be observable on the
studied time scale as triplet state formation (see section Kinetic Phases of Electron Transfer from the Polymer
to Protein). When the polymer-to-protein molar ratio is close
to or even smaller than 1:1, the electron transfer is the slowest
(see Figure C). This
ratio means that there is one polymer chain per protein on average
and, as it can be attached at random sites of RCs, the observed electron
transfer might be expected to be relatively slow. For higher polymer-to-protein
ratios, there might be more than one polymer chain attached to the
RC, increasing the probability of one occupying an optimal position
that leads to better wiring between the polymer and RC and thus increases
the observed electron-transfer rate. This scenario is depicted schematically
in Figure D. On the
other hand, we speculate that with increasing number of polymer chains
per protein, the probability of formation of large aggregates increases,
with polymers acting like an electrostatic “glue” (Figure E). This would explain
why in centrifugation experiments the amount of precipitate containing
both polymers and proteins increases with increasing molar ratio of
P-Os/RC (Figure B,C).
Mechanistic Significance and Conclusions
The TA data
demonstrate that P-Os and RCs interact strongly in solution despite
being sparsely dispersed compared to those in a hydrogel on an electrode
surface. The P-Os polymer is capable of reducing photoinduced P+ with time constants distributed over a range of a few microseconds
to around 1 ms. The fastest electron transfer from P-Os to P+ occurred on the time scale of 0.5–5 μs, values that
are similar to the ∼1 μs lifetime of the natural electron
transfer between complexed RC and cyt c2.[19−23] This demonstrates that P-Os in the proper conformation can perform
as efficiently as a natural donor in terms of the electron-transfer
rate. The exact value of the time constant depended on the concentration
ratio between P-Os and RCs, being the fastest for the highest ratios.
The data allowed derivation of a hypothesis that P-Os and RCs create
complexes in solution through electrostatic interactions, and it is
suggested that the lifetime of electron transfer for a single complex
depends mostly on its detailed conformation and, in particular, precisely
where on the protein surface the polymer binds.Irrespective
of sample composition, all three lifetimes for electron transfer from
the polymer to protein were orders of magnitude faster than naturally
occurring charge recombination of the P+(QAQB)− state (0.1–1 s), and so it was
at least 100 times more probable for this electron transfer to occur
rather than charge recombination. This promising finding is one of
the explanations for the relatively high (∼50%) internal quantum
efficiency of a biophotoelectrode consisting of RCs and P-Os reported
previously.[28]These results explain
the relatively high efficiencies of photoelectrodes
based on redox hydrogels and RCs in comparison to other architectures
with RCs. They show that surface properties (e.g., electrostatic)
that govern the interactions between natural and synthetic components
in a biohybrid material are at least as important as the proper matching
of redox levels. Moreover, the TA technique presented in this study
may in principle be used to monitor electron-transfer rates in situ
in an operational device. Such an approach enables a better understanding
of the electron-transfer process by obtaining exact values of reaction
rate constants, which are necessary for precise modeling and identifying
possible bottlenecks limiting the performance of the devices.
Authors: Vincent M Friebe; David J K Swainsbury; Paul K Fyfe; Wessel van der Heijden; Michael R Jones; Raoul N Frese Journal: Biochim Biophys Acta Date: 2016-09-28
Authors: Sabine Alsaoub; Adrian Ruff; Felipe Conzuelo; Edgar Ventosa; Roland Ludwig; Sergey Shleev; Wolfgang Schuhmann Journal: Chempluschem Date: 2017-03-31 Impact factor: 2.863
Authors: László Nagy; Melinda Magyar; Tibor Szabó; Kata Hajdu; Livia Giotta; Márta Dorogi; Francesco Milano Journal: Curr Protein Pept Sci Date: 2014 Impact factor: 3.272