Literature DB >> 33231748

Assessment of fungal diversity in soil rhizosphere associated with Rhazya stricta and some desert plants using metagenomics.

Samah O Noor1, Dhafer A Al-Zahrani1, Refaei M Hussein2,3, Mohammed N Baeshen4, Tarek A A Moussa5, Salah M Abo-Aba1,6, Ahmed M Al-Hejin1, Nabih A Baeshen1, John P Huelsenbeck7.   

Abstract

This study aimed to compare the fungal rhizosphere communities of Rhazya stricta, Enneapogon desvauxii, Citrullus colocynthis, Senna italica, and Zygophyllum simplex, and the gut mycobiota of Poekilocerus bufonius (Orthoptera, Pyrgomorphidae, "Usherhopper"). A total of 164,485 fungal reads were observed from the five plant rhizospheres and Usherhopper gut. The highest reads were in S. italica rhizosphere (29,883 reads). Species richness in the P. bufonius gut was the highest among the six samples. Ascomycota was dominant in all samples, with the highest reads in E. desvauxii (26,734 reads) rhizosphere. Sordariomycetes and Dothideomycetes were the dominant classes detected with the highest abundance in C. colocynthis and E. desvauxii rhizospheres. Aspergillus and Ceratobasidium were the most abundant genera in the R. stricta rhizosphere, Fusarium and Penicillium in the E. desvauxii rhizosphere and P. bufonius gut, Ceratobasidium and Myrothecium in the C. colocynthis rhizosphere, Aspergillus and Fusarium in the S. italica rhizosphere, and Cochliobolus in the Z. simplex rhizosphere. Aspergillus terreus was the most abundant species in the R. stricta and S. italica rhizospheres, Fusarium sp. in E. desvauxii rhizosphere, Ceratobasidium sp. in C. colocynthis rhizosphere, Cochliobolus sp. in Z. simplex rhizosphere, and Penicillium sp. in P. bufonius gut. The phylogenetic results revealed the unclassified species were related closely to Ascomycota and the species in E. desvauxii, S. italica and Z. simplex rhizospheres were closely related, where the species in the P. bufonius gut, were closely related to the species in the R. stricta, and C. colocynthis rhizospheres.

Entities:  

Keywords:  Fungi; Gut; Metagenomics; Rhazya stricta; Rhizosphere; Usherhopper

Year:  2020        PMID: 33231748     DOI: 10.1007/s00203-020-02119-z

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  37 in total

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Journal:  New Phytol       Date:  2010-04       Impact factor: 10.151

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6.  454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity.

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Journal:  New Phytol       Date:  2009-08-22       Impact factor: 10.151

7.  Monitoring impact of a pesticide treatment on bacterial soil communities by metabolic and genetic fingerprinting in addition to conventional testing procedures.

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Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

8.  The fungi: 1, 2, 3 ... 5.1 million species?

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Journal:  Am J Bot       Date:  2011-03-02       Impact factor: 3.844

Review 9.  Why bacteria matter in animal development and evolution.

Authors:  Sebastian Fraune; Thomas C G Bosch
Journal:  Bioessays       Date:  2010-07       Impact factor: 4.345

10.  Active and total microbial communities in forest soil are largely different and highly stratified during decomposition.

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Journal:  ISME J       Date:  2011-07-21       Impact factor: 10.302

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