Literature DB >> 33231642

Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology.

Judith A Blake1, Richard Baldarelli1, James A Kadin1, Joel E Richardson1, Cynthia L Smith1, Carol J Bult1.   

Abstract

The Mouse Genome Database (MGD; http://www.informatics.jax.org) is the community model organism knowledgebase for the laboratory mouse, a widely used animal model for comparative studies of the genetic and genomic basis for human health and disease. MGD is the authoritative source for biological reference data related to mouse genes, gene functions, phenotypes and mouse models of human disease. MGD is the primary source for official gene, allele, and mouse strain nomenclature based on the guidelines set by the International Committee on Standardized Nomenclature for Mice. MGD's biocuration scientists curate information from the biomedical literature and from large and small datasets contributed directly by investigators. In this report we describe significant enhancements to the content and interfaces at MGD, including (i) improvements in the Multi Genome Viewer for exploring the genomes of multiple mouse strains, (ii) inclusion of many more mouse strains and new mouse strain pages with extended query options and (iii) integration of extensive data about mouse strain variants. We also describe improvements to the efficiency of literature curation processes and the implementation of an information portal focused on mouse models and genes for the study of COVID-19.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Year:  2021        PMID: 33231642     DOI: 10.1093/nar/gkaa1083

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  Advancing our understanding of genetic risk factors and potential personalized strategies for pelvic organ prolapse.

Authors:  Reedik Mägi; Triin Laisk; Natàlia Pujol-Gualdo; Kristi Läll; Maarja Lepamets; Henna-Riikka Rossi; Riikka K Arffman; Terhi T Piltonen
Journal:  Nat Commun       Date:  2022-06-23       Impact factor: 17.694

2.  The 2021 Nucleic Acids Research database issue and the online molecular biology database collection.

Authors:  Daniel J Rigden; Xosé M Fernández
Journal:  Nucleic Acids Res       Date:  2021-01-08       Impact factor: 16.971

3.  Transmission distortion and genetic incompatibilities between alleles in a multigenerational mouse advanced intercross line.

Authors:  Danny Arends; Stefan Kärst; Sebastian Heise; Paula Korkuc; Deike Hesse; Gudrun A Brockmann
Journal:  Genetics       Date:  2022-01-04       Impact factor: 4.402

4.  Dimensional reduction of phenotypes from 53 000 mouse models reveals a diverse landscape of gene function.

Authors:  Tomasz Konopka; Letizia Vestito; Damian Smedley
Journal:  Bioinform Adv       Date:  2021-10-11

5.  Resilience in Long-Term Viral Infection: Genetic Determinants and Interactions.

Authors:  Candice Brinkmeyer-Langford; Katia Amstalden; Kranti Konganti; Andrew Hillhouse; Koedi Lawley; Aracely Perez-Gomez; Colin R Young; C Jane Welsh; David W Threadgill
Journal:  Int J Mol Sci       Date:  2021-10-21       Impact factor: 5.923

6.  Multiple genome viewer (MGV): a new tool for visualization and comparison of multiple annotated genomes.

Authors:  Joel E Richardson; Richard M Baldarelli; Carol J Bult
Journal:  Mamm Genome       Date:  2021-08-27       Impact factor: 2.957

7.  Revised eutherian gene collections.

Authors:  Marko Premzl
Journal:  BMC Genom Data       Date:  2022-07-23

8.  Delayed puberty, gonadotropin abnormalities and subfertility in male Padi2/Padi4 double knockout mice.

Authors:  Kelly L Sams; Chinatsu Mukai; Brooke A Marks; Chitvan Mittal; Elena Alina Demeter; Sophie Nelissen; Jennifer K Grenier; Ann E Tate; Faraz Ahmed; Scott A Coonrod
Journal:  Reprod Biol Endocrinol       Date:  2022-10-12       Impact factor: 4.982

9.  Mouse Genome Informatics (MGI): latest news from MGD and GXD.

Authors:  Martin Ringwald; Joel E Richardson; Richard M Baldarelli; Judith A Blake; James A Kadin; Cynthia Smith; Carol J Bult
Journal:  Mamm Genome       Date:  2021-10-26       Impact factor: 2.957

  9 in total

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