Literature DB >> 33229581

Local conformal autoencoder for standardized data coordinates.

Erez Peterfreund1, Ofir Lindenbaum2, Felix Dietrich3, Tom Bertalan4, Matan Gavish1, Ioannis G Kevrekidis4, Ronald R Coifman5.   

Abstract

We propose a local conformal autoencoder (LOCA) for standardized data coordinates. LOCA is a deep learning-based method for obtaining standardized data coordinates from scientific measurements. Data observations are modeled as samples from an unknown, nonlinear deformation of an underlying Riemannian manifold, which is parametrized by a few normalized, latent variables. We assume a repeated measurement sampling strategy, common in scientific measurements, and present a method for learning an embedding in [Formula: see text] that is isometric to the latent variables of the manifold. The coordinates recovered by our method are invariant to diffeomorphisms of the manifold, making it possible to match between different instrumental observations of the same phenomenon. Our embedding is obtained using LOCA, which is an algorithm that learns to rectify deformations by using a local z-scoring procedure, while preserving relevant geometric information. We demonstrate the isometric embedding properties of LOCA in various model settings and observe that it exhibits promising interpolation and extrapolation capabilities, superior to the current state of the art. Finally, we demonstrate LOCA's efficacy in single-site Wi-Fi localization data and for the reconstruction of three-dimensional curved surfaces from two-dimensional projections.
Copyright © 2020 the Author(s). Published by PNAS.

Entities:  

Keywords:  autoencoder; canonical coordinates; dimensionality reduction; manifold learning

Year:  2020        PMID: 33229581      PMCID: PMC7733838          DOI: 10.1073/pnas.2014627117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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