| Literature DB >> 33228581 |
Danyal Imani1, Mohammad Masoud Eslami2, Gholamreza Anani-Sarab3, Mansur Aliyu4, Bahman Razi2, Ramazan Rezaei5.
Abstract
BACKGROUND: Previous studies evaluated the association of IL-4 C33T polymorphism and risk of bronchial asthma but failed to establish a consistent conclusive association. In the present meta-analysis, we intend to define a more reliable estimate of the association in the presence of filling published literature.Entities:
Keywords: Asthma; IL-4; Interleukin- 4; Meta –analysis; Polymorphism
Mesh:
Substances:
Year: 2020 PMID: 33228581 PMCID: PMC7686752 DOI: 10.1186/s12881-020-01169-w
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Fig. 1Flow diagram of study selection process
Characteristics of studies included in meta-analysis of overall asthma
| Study author | Year | Country | continent | Ethnicity | Sex | Total cases/control | Age case/control | Genotyping method | Quality score |
|---|---|---|---|---|---|---|---|---|---|
| Suzuki et al. | 2000 | Japan | Asian | Caucasian | M = 50/60 F = 100/150 | 120 / 120 | Adult | PCR-RFLP | |
| Beghe et al. | 2003 | UK | European | Caucasian | M = 88/99 F = 93/89 | 187 / 182 | Adult | PCR-RFLP | |
| Basehore et al. | 2004 | USA | American (USA white) | Caucasian | M = 93/140 F = 98/147 | 233 / 245 | Adult | PCR | |
| Basehore et al. | 2004 | USA | American | American- African | M = 77/91 F = 121/148 | 168 / 269 | Adult | PCR | |
| Basehore et al. | 2004 | USA | American (USA Hispanic) | Caucasian (Hispanic) | M = 54/62 F = 41/89 | 116 / 130 | Adult | PCR | |
| Park et al. | 2004 | Korea | Asian | Caucasian | M = 248/302 F = 85/86 | 532 / 170 | Mixed | SnaP shot | |
| Donfack et al. | 2005 | USA | American | Caucasian | M = NR F=NR | 126 / 205 | Mixed | LAS | |
| Donfack et al. | 2005 | USA | American | American- African | M = NR F=NR | 205 / 183 | Mixed | LAS | |
| Garcia et al. | 2005 | Spain | European | Caucasian | M = NR F=NR | 133 / 79 | Mixed | TaqMan | |
| Battle et al. | 2007 | USA | American | American- African | M = 105/156 F = 67/109 | 261 / 176 | Mixed | PCR-RFLP | |
| Amirzargar et al. | 2009 | Iran | Asian | Caucasian | M = NR F=NR | 59 / 139 | Mixed | PCR-SSP | |
| Jiang et al. | 2009 | China | Asian | Caucasian | M = NR F = NR | 24 / 24 | Adult | PCR-RFLP | |
| Daley et al. | 2009 | Australia | Australian | Caucasian | M = NR F = NR | 643 / 751 | Mixed | Illumina Bead array system | |
| Haller et al. | 2009 | USA | American | American- African | M = NR F=NR | 72 / 70 | Adult | PCR-RFLP | |
| Wang et al. | 2009 | Taiwan | Asian | Caucasian | M = 299/147 F = 245/265 | 446 / 510 | Children | TaqMan | |
| Berce et al. | 2010 | Slovenia | European | Caucasian | M = NR F=NR | 106 / 89 | Children | PCR-RFLP | |
| Undarmaa et al. | 2010 | Japan | Asian | Caucasian | M = NR F=NR | 324 / 336 | Children | TaqMan-ASA | |
| Undarmaa et al. | 2010 | Japan | Asian | Caucasian | M = NR F=NR | 367 / 676 | Adult | TaqMan-ASA | |
| Wu et al. | 2010 | China | Asian | Caucasian | M = 138/114 F = 118/109 | 252 / 227 | Children | PCR-RFLP | |
| Michel et al. | 2010 | Germany | European | Caucasian | M = NR F=NR | 703 / 658 | Children | Illumina Sentrix Bead chip | |
| Huang et al. | 2011 | China | Asian | Caucasian | M = 51/49 F = 70/52 | 100 / 122 | Children | PCR-RFLP | |
| Yang et al. | 2011 | China | Asian | Caucasian | M = 101/101 F = 155/50 | 202 / 205 | Adult | MALDI-TOF | |
| Chen et al. | 2011 | China | Asian | Caucasian | M = NR F=NR | 202 / 191 | Children | MALDI-TOF | |
| Micheal et al. | 2013 | Pakistan | Asian | Caucasian | M = NR F=NR | 108 / 120 | Mixed | PCR-RFLP | |
| Miyake et al. | 2013 | Japan | Asian | Caucasian | M = 0/89 F = 0/1281 | 89 / 1281 | Adult | TaqMan | |
| Davoodi et al. | 2013 | India | Asian | Caucasian | M = 45/55 F = 21/29 | 100 / 50 | Adult | Mass Array | |
| Wang et al. | 2015 | China | Asian | Caucasian | M = NR F=NR | 392 / 849 | Children | Mass Array | |
| Li et al. | 2016 | China | Asian | Caucasian | M = 134/183 F = 151/200 | 317 / 351 | Children | PCR-RFLP |
NR not reported, M male, F female
Distribution of genotype and allele among asthma patients and controls
| Study author | Asthma cases | Healthy control | P-HWE | MAF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CC | CT | TT | C | T | CC | CT | TT | C | T | |||
| Suzuki et al. | 11 | 56 | 53 | 78 | 162 | 10 | 59 | 51 | 79 | 161 | 0/21 | 0/67 |
| Beghe et al. | 140 | 41 | 6 | 321 | 53 | 132 | 48 | 2 | 312 | 52 | 0/29 | 0/142 |
| Basehore et al. | 153 | 72 | 8 | 378 | 88 | 185 | 56 | 4 | 426 | 64 | 0/91 | 0/13 |
| Basehore et al. | 51 | 83 | 34 | 185 | 151 | 87 | 132 | 50 | 306 | 232 | 0/99 | 0/431 |
| Basehore et al. | 48 | 53 | 15 | 149 | 83 | 60 | 57 | 13 | 177 | 83 | 0/92 | 0/319 |
| Park et al. | 19 | 164 | 349 | 202 | 862 | 7 | 57 | 106 | 71 | 269 | 0/84 | 0/791 |
| Donfack et al. | 83 | 37 | 6 | 203 | 49 | 150 | 50 | 5 | 350 | 60 | 0/73 | 0/146 |
| Donfack et al. | 68 | 107 | 30 | 243 | 167 | 70 | 86 | 27 | 226 | 140 | 0/94 | 0/382 |
| Garcia et al. | 93 | 39 | 1 | 225 | 41 | 64 | 15 | 0 | 143 | 15 | 0/35 | 0/094 |
| Battle et al. | 85 | 128 | 48 | 298 | 224 | 57 | 87 | 32 | 201 | 151 | 0/9 | 0/428 |
| Amirzargar et al. | 2 | 56 | 1 | 60 | 58 | 61 | 78 | 0 | 200 | 78 | < 0.001 | 0/28 |
| Jiang et al. | 0 | 9 | 15 | 9 | 39 | 2 | 10 | 12 | 14 | 34 | 0/96 | 0/708 |
| Daley et al. | 481 | 150 | 12 | 1112 | 174 | 555 | 181 | 15 | 1291 | 211 | 0/95 | 0/14 |
| Haller et al. | 21 | 36 | 15 | 78 | 66 | 27 | 33 | 10 | 87 | 53 | 0/98 | 0/378 |
| Wang et al. | 22 | 147 | 277 | 191 | 701 | 16 | 186 | 308 | 218 | 802 | 0/05 | 0/786 |
| Berce et al. | 67 | 31 | 8 | 165 | 47 | 51 | 35 | 3 | 137 | 41 | 0/3 | 0/23 |
| Undarmaa et al. | 27 | 142 | 155 | 196 | 452 | 37 | 144 | 155 | 218 | 454 | 0/68 | 0/675 |
| Undarmaa et al. | 28 | 154 | 185 | 210 | 524 | 64 | 286 | 326 | 414 | 938 | 0/91 | 0/693 |
| Wu et al. | 6 | 83 | 163 | 95 | 409 | 11 | 87 | 129 | 109 | 345 | 0/44 | 0/759 |
| Michel et al. | 458 | 210 | 35 | 1126 | 280 | 474 | 173 | 11 | 1121 | 195 | 0/28 | 0/148 |
| Huang et al. | 1 | 23 | 76 | 25 | 175 | 3 | 49 | 70 | 55 | 189 | 0/09 | 0/774 |
| Yang et al. | 14 | 56 | 132 | 84 | 320 | 7 | 67 | 131 | 81 | 329 | 0/65 | 0/802 |
| Chen et al. | 6 | 72 | 124 | 84 | 320 | 6 | 62 | 123 | 74 | 308 | 0/58 | 0/806 |
| Micheal et al. | 77 | 31 | 0 | 185 | 31 | 93 | 27 | 0 | 213 | 27 | 0/16 | 0/112 |
| Miyake et al. | 12 | 33 | 44 | 57 | 121 | 160 | 604 | 517 | 924 | 1638 | 0/42 | 0/639 |
| Davoodi et al. | 65 | 31 | 4 | 161 | 39 | 36 | 14 | 0 | 86 | 14 | 0/24 | 0/14 |
| Wang et al. | 49 | 176 | 167 | 274 | 510 | 102 | 410 | 337 | 614 | 1084 | 0/18 | 0/638 |
| Li et al. | 147 | 170 | 0 | 464 | 170 | 170 | 181 | 0 | 521 | 181 | < 0.001 | 0/257 |
P-HWE, p-value for Hardy–Weinberg equilibrium; MAF, minor allele frequency of control group
Fig. 2Pooled odds ratio (OR) and 95% confidence interval of individual studies and pooled data for the association between IL-4 C33T gene polymorphism and asthma risk in overall populations for a dominant model, b recessive model
Main results of pooled ORs in meta-analysis of IL-4 (C33T) gene polymorphisms
| Subgroup | Sample size | Test of association | Test of heterogeneity | Test of publication bias (Begg’s test) | Test of publication bias (Egger’s test) | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Genetic model | Case/Control | OR | 95% CI ( | I2 (%) | P | z | P | t | P | |
| Dominant model | 6587 / 8404 | 20.9 | 0.16 | 0.77 | 0.44 | 0.90 | 0.37 | |||
| Recessive model | 6587 / 8404 | 0 | 0.56 | 2.68 | 0.001 | 2.88 | 0.001 | |||
| Allelic model | 6587 / 8404 | 27.8 | 0.08 | 2.53 | 0.01 | 2.39 | 0.02 | |||
| CC vs. TT | 6587 / 8404 | 0 | 0.58 | 1.78 | 0.07 | 1.57 | 0.13 | |||
| CT vs. TT | 6587 / 8404 | 20.5 | 0.17 | 0.23 | 0.81 | 0.56 | 0.58 | |||
| Dominant model | 1678 / 3252 | 1.16 | 0.97–1.40 (0.10) | 0 | 0.54 | −0.98 | 0.32 | −1.43 | 0.19 | |
| Recessive model | 1678 / 3252 | 1.17 | 0.99–1.39 (0.06) | 0 | 0.93 | 2.41 | 0.01 | 3.57 | 0.007 | |
| Allelic model | 1678 / 3252 | 0 | 0.75 | 1.01 | 0.31 | 1.44 | 0.18 | |||
| CC vs. TT | 1678 / 3252 | 1.22 | 0.93–1.61 (0.15) | 0 | 0.72 | 0.83 | 0.40 | 0.64 | 0.54 | |
| CT vs. TT | 1678 / 3252 | 1.09 | 0.90–1.32 (0.91) | 0.2 | 0.43 | −1.16 | 0.24 | −1.72 | 0.12 | |
| Dominant model | 2067 / 1823 | 1.14 | 0.96–1.34 (0.13) | 55.8 | 0.02 | 2.23 | 0.02 | 3.47 | 0.01 | |
| Recessive model | 2067 / 1823 | 1.08 | 0.84–1.40 (0.53) | 0 | 0.89 | −0.49 | 0.62 | 0.47 | 0.67 | |
| Allelic model | 2067 / 1823 | 56.9 | 0.02 | 2.72 | 0.007 | 3.11 | 0.02 | |||
| CC vs. TT | 2067 / 1823 | 1.10 | 0.77–1.57 (0.60) | 0 | 0.88 | 1.47 | 0.14 | 2.01 | 0.13 | |
| CT vs. TT | 2067 / 1823 | 1.13 | 0.95–1.35 (0.15) | 53.7 | 0.03 | 2.47 | 0.01 | 3.38 | 0.01 | |
| Dominant model | 2842 / 3333 | 1.15 | 0.99–1.34 (0.07) | 12.4 | 0.33 | −0.42 | 0.67 | −0.48 | 0.64 | |
| Recessive model | 2842 / 3333 | 54 | 0.03 | 1.24 | 0.21 | 2.34 | 0.05 | |||
| Allelic model | 2842 / 3333 | 44.6 | 0.07 | 0.42 | 0.67 | 0.47 | 0.65 | |||
| CC vs. TT | 2842 / 3333 | 1.27 | 0.97–1.65 (0.08) | 42.3 | 0.09 | 0.99 | 0.32 | 0.97 | 0.36 | |
| CT vs. TT | 2842 / 3333 | 1.08 | 0.92–1.26 (0.33) | 4.5 | 0.39 | −0.42 | 0.67 | −0.64 | 0.54 | |
| Dominant model | 3634 / 5371 | 1.10 | 0.93–1.130 (0.25) | 29.3 | 0.13 | 0.81 | 0.41 | 1.44 | 0.17 | |
| Recessive model | 3634 / 5371 | 0 | 0.56 | 0.85 | 0.39 | 1.24 | 0.24 | |||
| Allelic model | 3634 / 5371 | 34.9 | 0.08 | 2.31 | 0.02 | 2.70 | 0.01 | |||
| CC vs. TT | 3634 / 5371 | 1.08 | 0.87–1.33 (0.49) | 0 | 0.77 | 0 | 1 | 0.09 | 0.93 | |
| CT vs. TT | 3634 / 5371 | 1.02 | 0.89–1.18 (0.76) | 29.6 | 0.12 | 0.45 | 0.65 | 0.93 | 0.36 | |
| Dominant model | 1129 / 1008 | 48.3 | 0.12 | −0.68 | 0.49 | −0.64 | 0.58 | |||
| Recessive model | 1129 / 1008 | 0 | 0.95 | −0.52 | 0.60 | −0.85 | 0.55 | |||
| Allelic model | 1129 / 1008 | 31.2 | 0.22 | 0 | 1 | −0.68 | 0.56 | |||
| CC vs. TT | 1129 / 1008 | 0 | 0.87 | −0.52 | 0.60 | −1.20 | 0.44 | |||
| CT vs. TT | 1129 / 1008 | 1.13 | 0.92–1.38 (0.24) | 52.8 | 0.09 | −0.68 | 0.49 | −0.59 | 0.61 | |
| Dominant model | 1181 / 1278 | 0 | 0.76 | 0.45 | 0.65 | 0.54 | 0.61 | |||
| Recessive model | 1181 / 1278 | 1.16 | 0.88–1.52 (0.29) | 0 | 0.89 | 2.55 | 0.01 | 6.60 | 0.06 | |
| Allelic model | 1181 / 1278 | 0 | 0.55 | 1.65 | 0.09 | 2.71 | 0.04 | |||
| CC vs. TT | 1181 / 1278 | 1.26 | 0.93–1.71 (0.14) | 0 | 0.84 | 2.25 | 0.02 | 3.17 | 0.05 | |
| CT vs. TT | 1181 / 1278 | 0 | 0.85 | 0.45 | 0.65 | 0.18 | 0.86 | |||
| Dominant model | 5881 / 7710 | 30.7 | 0.08 | 0.78 | 0.43 | 0.69 | 0.50 | |||
| Recessive model | 5881 / 7710 | 6.7 | 0.3 | 1.98 | 0.04 | 2.44 | 0.02 | |||
| Allelic model | 5881 / 7710 | 35.7 | 0.04 | 1.87 | 0.06 | 1.79 | 0.08 | |||
| CC vs. TT | 5881 / 7710 | 4.6 | 0.4 | 1.14 | 0.25 | 0.72 | 0.48 | |||
| CT vs. TT | 5881 / 7710 | 1.1 | 0.98–1.22 (0.09) | 30.6 | 0.08 | −0.68 | 0.49 | −0.59 | 0.61 | |
| Dominant model | 706 / 698 | 1.14 | 0.89–1.45 (0.29) | 0 | 0.76 | 0.45 | 0.65 | 0.54 | 0.61 | |
| Recessive model | 706 / 698 | 1.08 | 0.80–1.46 (0.6) | 0 | 0.87 | 2.55 | 0.01 | 6.60 | 0.06 | |
| Allelic model | 706 / 698 | 1.08 | 0.93–1.27 (0.32) | 0 | 0.74 | 1.65 | 0.09 | 2.71 | 0.04 | |
| CC vs. TT | 706 / 698 | 1.16 | 0.82–1.62 (0.4) | 0 | 0.79 | 2.25 | 0.02 | 3.17 | 0.05 | |
| CT vs. TT | 706 / 698 | 1.13 | 0.87–1.45 (0.35) | 0 | 0.8 | 0.45 | 0.65 | 0.18 | 0.86 | |
Fig. 3Pooled odds ratio (OR) and 95% confidence interval of individual studies and pooled data for the association between IL-4 C33T gene polymorphism and asthma risk in different subgroup analysis: a allelic model, b recessive model, c dominant model
Fig. 4Begg’s funnel plot for publication bias test. Dominant model IL-4 C33T. Each point represents a separate study for the indicated association
Fig. 5Sensitivity analysis in present meta-analysis investigates the single nucleotide polymorphisms of IL-4 C33T contribute to risk for asthma