| Literature DB >> 33220708 |
Xuzi Cai1, Huijiao Fu1, Yan Wang1, Qiwen Liu1, Xuefeng Wang2.
Abstract
BACKGROUND: Genetic causes of premature ovarian insufficiency (POI) account for approximately 20 ~ 25% of patients. So far, only a few genes have been identified.Entities:
Keywords: GPSM1; Ovarian granulosa cell; Premature ovarian insufficiency; Whole-exome sequencing; cAMP-PKA-CREB pathway
Mesh:
Substances:
Year: 2020 PMID: 33220708 PMCID: PMC7680585 DOI: 10.1186/s13048-020-00740-6
Source DB: PubMed Journal: J Ovarian Res ISSN: 1757-2215 Impact factor: 4.234
Information about candidate gene (ND: no date)
| Gene | Chr | Transcription ID | exon | Nucleotide change | AA change | dbSNP | Frequency | Pathogenic predictions | Genotype | Number of variant samples | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1000 genomes | ExAC | Ployphen2 | SIFT | Mutation Taster | LRT | Mutation Assessor | |||||||||
| OR2T29 | Chr1 | NM_001004694 | 1 | c.26A > G | p.N9S | ND | ND | 0.00009122 | Benign | Deleterious | Probably harmless | Neutral | Medium | Heterozygous | 5 |
| ANKRD36C | Chr2 | NM_001310154 | 16 | c.1265 T > G | p. V422G | rs78715705 | ND | 0.0001 | ND | Deleterious | Probably harmless | ND | ND | Heterozygous | 4 |
| FRG1 | Chr4 | NM_004477 | 5 | c.330G > T | p. K110N | ND | ND | 0.009 | Probably damaging | Deleterious | Disease causing | Deleterious | Medium | Heterozygous | 5 |
| sPSPH | Chr7 | NM_004577 | 5 | c.268G > A | p. G90S | rs75395437 | 0.0002 | 0.0051 | Probably damaging | Deleterious | Disease causing | Deleterious | Medium | Heterozygous | 9 |
| PABPC3 | Chr13 | NM_030979 | 1 | c.541G > A | p. A181T | rs112107735 | 0.007189 | 0.0013 | Possible | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 8 |
| PABPC3 | Chr13 | NM_030980 | 1 | c.691A > G | p. K231E | rs78826513 | ND | 0.002 | Probably damaging | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 9 |
| PABPC3 | Chr13 | NM_030981 | 1 | c.832C > T | p. R278C | rs78552667 | ND | 0.0001 | Benign | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 9 |
| PABPC3 | Chr13 | NM_030982 | 1 | c.859A > G | p. R287G | rs201411821 | ND | 0.0002 | Benign | Deleterious | Disease causing | Unknown | High | Heterozygous | 9 |
| PABPC3 | Chr13 | NM_030983 | 1 | c.938C > T | p. A313V | rs76994938 | 0.000399 | 0.00001648 | Benign | Deleterious | Probably harmless | Unknown | Neutral | Heterozygous | 8 |
| PABPC3 | Chr13 | NM_030984 | 1 | c.95C > T | p. T319I | rs80261016 | ND | 0 | Possible | Deleterious | Disease causing | Unknown | Low | Heterozygous | 9 |
| LMO7 | Chr13 | NM_001306080 | 10 | c.1610G > A | p. R537K | rs142687160 | 0.009185 | 0.0037 | Benign | Deleterious | Disease causing | Deleterious | Neutral | Heterozygous | 5 |
| TPSAB1 | Chr16 | NM_003294 | 4 | c.422C > T | p. T141I | rs1064781 | ND | 0.0068 | Benign | Deleterious | Probably harmless | Neutral | Neutral | Heterozygous | 8 |
| TBC1D26 | Chr17 | NM_178571 | 5 | c.167A > C | p. E56A | rs3852810 | ND | 0.0099 | Possible | Deleterious | Probably harmless | Unknown | Medium | Heterozygous | 4 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.809 T > C | p.M270T | rs200177867 | ND | 0.00006856 | Probably damaging | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 5 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.810G > A | p.M270I | rs201532581 | ND | 0.00006856 | Probably damaging | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 5 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.812G > T | p. G271V | rs199741851 | ND | 0.00006855 | Probably damaging | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 5 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.850G > A | p. G284S | rs77830704 | ND | 0.0003 | Probably damaging | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 5 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.860G > A | p. R287Q | rs78386506 | ND | 0.0002 | Possible | Deleterious | Disease causing | Unknown | Medium | Heterozygous | 5 |
| CNN2 | Chr19 | NM_001303501 | 7 | c.875C > A | p. P292H | rs75676484 | ND | 0.00008565 | Probably damaging | Deleterious | Disease causing | Deleterious | Medium | Heterozygous | 5 |
| DKKL1 | Chr19 | NM_001197301 | 2 | c.72 T > G | p. L25R | rs2303757 | 0.004193 | 0.0021 | Possible | Deleterious | Harmless | Neutral | Neutral | Heterozygous | 5 |
| SCUBE1 | Chr22 | NM_173050 | 10 | c.1169C > G | p. P390R | rs185039637 | 0.001997 | 0.0011 | Possible | Deleterious | Disease causing | Deleterious | Low | Heterozygous | 3 |
| GPSM1 | Chr9 | NM_001145638 | 14 | c.1840C > A | p. Q614K | rs539775258 | 0.0002 | 0.000008446 | Probably damaging | Deleterious | Disease causing | Deleterious | Medium | Heterozygous | 3 |
Fig. 1Hotspot and conservation sites of GPSM1 Q614K. a. Functional domain information of Glu614Lys (Q614K) in protein GPSM1. b. Conservation analysis of GPSM1 Q614K among different species
Fig. 2The expression of GPSM1 in ovaries before and after multi-follicle development. A. Morphological changes of rat ovaries: a. Ovaries from NS-treated immature rats were light pink and normal in size; b. Ovaries from PMSG-primed immature rats were significantly enlarged, with hyperemia and mulberry-like changes. B. The weight of the bilateral rat ovaries after treatment in the experimental group (PMSG group, n = 3) was significantly increased compared to the control group (NS group, n = 3) (**P < 0.01). C and D. The expression of GPSM1 detected by RT-PCR and western blot was up-regulated in the PMSG group (n = 3) compared to the NS group (n = 3) (**P < 0.01)
Fig. 3The effect of silencing GPSM1 on GCs. A. The expression of GPSM1 in rat ovaries detected by immunohistochemistry. B and C. Silencing of Gpsm1 expression in GCs using siRNAs. RT-PCR (B) and western blot (C) analyses showed that Gpsm1-targeting siRNA-3 provided optimal depletion of GPSM1 in GCs compared to the siRNA-negative control (NC-siRNA) and blank control (**P < 0.01). D. Gpsm1-knockdown decreased the proliferation rate of GCs significantly 48 h, 72 h, 96 h, and 120 h after transfection with siRNA. GCs transfected with NC-siRNA or Gpsm1-siRNA were subjected to CCK8 analysis (**P < 0.01). E and F. Gpsm1-knockdown increased the apoptosis rate of GCs. GCs transfected with NC-siRNA or Gpsm1-siRNA were subjected to Annexin V-FITC/PI double staining and flow cytometric analysis (**P < 0.01)
Fig. 4Silencing of Gpsm1 alters the expression of the cAMP-CREB-PKA signaling molecules in GCs. After GCs were transfected with NC-siRNA and Gpsm1-siRNA, RT-PCR (a) and western blot (b) analyses were performed to measure the levels of GPSM1 and intracellular signaling molecules. The average results from three independent experiments are shown (**P < 0.01)