Literature DB >> 33215685

Simultaneous spatial smoothing and outlier detection using penalized regression, with application to childhood obesity surveillance from electronic health records.

Young-Geun Choi1, Lawrence P Hanrahan2, Derek Norton3, Ying-Qi Zhao4.   

Abstract

Electronic health records (EHRs) have become a platform for data-driven granular-level surveillance in recent years. In this paper, we make use of EHRs for early prevention of childhood obesity. The proposed method simultaneously provides smooth disease mapping and outlier information for obesity prevalence that are useful for raising public awareness and facilitating targeted intervention. More precisely, we consider a penalized multilevel generalized linear model. We decompose regional contribution into smooth and sparse signals, which are automatically identified by a combination of fusion and sparse penalties imposed on the likelihood function. In addition, we weigh the proposed likelihood to account for the missingness and potential nonrepresentativeness arising from the EHR data. We develop a novel alternating minimization algorithm, which is computationally efficient, easy to implement, and guarantees convergence. Simulation studies demonstrate superior performance of the proposed method. Finally, we apply our method to the University of Wisconsin Population Health Information Exchange database.
© 2020 The International Biometric Society.

Entities:  

Keywords:  childhood obesity surveillance; disease mapping; electronic health records; fusion penalty; outlier detection; sparse penalty

Mesh:

Year:  2020        PMID: 33215685      PMCID: PMC9138186          DOI: 10.1111/biom.13404

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   1.701


  13 in total

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4.  Detecting disease outbreaks using local spatiotemporal methods.

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6.  Post-Selection Inference for 1-Penalized Likelihood Models.

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Journal:  Can J Stat       Date:  2017-03-06       Impact factor: 0.875

7.  Electronic health records and community health surveillance of childhood obesity.

Authors:  Tracy L Flood; Ying-Qi Zhao; Emily J Tomayko; Aman Tandias; Aaron L Carrel; Lawrence P Hanrahan
Journal:  Am J Prev Med       Date:  2015-02       Impact factor: 5.043

8.  Space-Time Smoothing of Complex Survey Data: Small Area Estimation for Child Mortality.

Authors:  Laina D Mercer; Jon Wakefield; Athena Pantazis; Angelina M Lutambi; Honorati Masanja; Samuel Clark
Journal:  Ann Appl Stat       Date:  2015-12       Impact factor: 2.083

9.  Finding big shots: small-area mapping and spatial modelling of obesity among Swiss male conscripts.

Authors:  Radoslaw Panczak; Leonhard Held; André Moser; Philip A Jones; Frank J Rühli; Kaspar Staub
Journal:  BMC Obes       Date:  2016-02-18

10.  Characterizing and Managing Missing Structured Data in Electronic Health Records: Data Analysis.

Authors:  Brett K Beaulieu-Jones; Daniel R Lavage; John W Snyder; Jason H Moore; Sarah A Pendergrass; Christopher R Bauer
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  1 in total

1.  Integrating functional data analysis with case-based reasoning for hypertension prognosis and diagnosis based on real-world electronic health records.

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  1 in total

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