Literature DB >> 33210104

Label-free SERS detection of proteins based on machine learning classification of chemo-structural determinants.

Andrea Barucci1, Cristiano D'Andrea, Edoardo Farnesi, Martina Banchelli, Chiara Amicucci, Marella de Angelis, Byungil Hwang, Paolo Matteini.   

Abstract

Establishing standardized methods for a consistent analysis of spectral data remains a largely underexplored aspect in surface-enhanced Raman spectroscopy (SERS), particularly applied to biological and biomedical research. Here we propose an effective machine learning classification of protein species with closely resembled spectral profiles by a mixed data processing based on principal component analysis (PCA) applied to multipeak fitting on SERS spectra. This strategy simultaneously assures a successful discrimination of proteins and a thorough characterization of the chemostructural differences among them, ultimately opening up new routes for SERS evolution toward sensing applications and diagnostics of interest in life sciences.

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Year:  2020        PMID: 33210104     DOI: 10.1039/d0an02137g

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  6 in total

1.  Ion-exchanged glass microrods as hybrid SERS/fluorescence substrates for molecular beacon-based DNA detection.

Authors:  Simone Berneschi; Cristiano D'Andrea; Francesco Baldini; Martina Banchelli; Marella de Angelis; Stefano Pelli; Roberto Pini; Diego Pugliese; Nadia G Boetti; Davide Janner; Daniel Milanese; Ambra Giannetti; Paolo Matteini
Journal:  Anal Bioanal Chem       Date:  2021-07-19       Impact factor: 4.142

Review 2.  Prospects of Surface-Enhanced Raman Spectroscopy for Biomarker Monitoring toward Precision Medicine.

Authors:  Javier Plou; Pablo S Valera; Isabel García; Carlos D L de Albuquerque; Arkaitz Carracedo; Luis M Liz-Marzán
Journal:  ACS Photonics       Date:  2022-02-02       Impact factor: 7.529

3.  Large-area and low-cost SERS substrates based on a gold-coated nanostructured surface fabricated on a wafer-scale.

Authors:  Abhijit Das; Nitin Gupta; Ajay Kumar Agrawal; Anuj Dhawan
Journal:  RSC Adv       Date:  2022-03-28       Impact factor: 3.361

Review 4.  Surface enhanced Raman scattering for probing cellular biochemistry.

Authors:  Cecilia Spedalieri; Janina Kneipp
Journal:  Nanoscale       Date:  2022-04-07       Impact factor: 7.790

5.  Human Angiotensin I-Converting Enzyme Produced by Different Cells: Classification of the SERS Spectra with Linear Discriminant Analysis.

Authors:  Irina Boginskaya; Robert Safiullin; Victoria Tikhomirova; Olga Kryukova; Natalia Nechaeva; Naida Bulaeva; Elena Golukhova; Ilya Ryzhikov; Olga Kost; Konstantin Afanasev; Ilya Kurochkin
Journal:  Biomedicines       Date:  2022-06-12

6.  Cost Effective Silver Nanowire-Decorated Graphene Paper for Drop-On SERS Biodetection.

Authors:  Chiara Amicucci; Cristiano D'Andrea; Marella de Angelis; Martina Banchelli; Roberto Pini; Paolo Matteini
Journal:  Nanomaterials (Basel)       Date:  2021-06-04       Impact factor: 5.076

  6 in total

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