Literature DB >> 33200278

Streptomyces buecherae sp. nov., an actinomycete isolated from multiple bat species.

Paris S Hamm1,2, Christopher A Dunlap3, Michael W Mullowney4, Nicole A Caimi5, Neil L Kelleher4, Regan J Thomson4, Andrea Porras-Alfaro6,7, Diana E Northup5.   

Abstract

A putative novel clade within the genus Streptomyces was discovered following antifungal screening against Pseudogymnoascus destructans, the causative agent of white-nose syndrome, and described using multi-locus sequencing analysis. Swabs from both the cave myotis bat (Myotis velifer) and the Brazilian free-tailed bat (Tadarida brasiliensis) in southern New Mexico bore isolates AC536, AC541T and AC563, which were characterised using phylogenetic, morphological, and phenotypic analyses. Multi-locus sequence analysis positions AC541T with neighbors Streptomyces rubidus (NRRL B-24619T), Streptomyces guanduensis (NRRL B-24617T), and Streptomyces yeochonensis (NRRL B-24245T). A complete genome of the type strain was assembled to determine its taxonomy and secondary metabolite potential. ANI comparisons between all closely related types strains are shown to be well below the 95-96% species delineation. DNA-DNA relatedness between AC541T and its nearest neighbors ranged between 23.7 and 24.1% confirming novelty. Approximately 1.49 Mb or 17.76% of the whole genome is devoted to natural product biosynthesis. The DNA G + C content of the genomic DNA of the type strain is 73.13 mol %. Micromorphology depicts ovoid spores with smooth surfaces in flexuous chains. Strains presented an ivory to yellow hue on most ISP media except inorganic salts-starch agar (ISP4) and can grow on D-glucose, mannitol, and D-fructose, but exhibited little to no growth on L-arabinose, sucrose, D-xylose, inositol, L-rhamnose, D-raffinose, and cellulose. This clade possesses the capability to grow from 10 to 45 °C and 12.5% (w/v) NaCl. There was strain growth variation in pH, but all isolates thrive at alkaline levels. Based on our polyphasic study of AC541T, the strain warrants the assignment to a novel species, for which the name Streptomyces buecherae sp. nov. is proposed. The type strain is AC541T (= JCM 34263T, = ATCC TSD201T).

Entities:  

Keywords:  Antifungal; Bat; Biosynthetic gene clusters; Streptomyces; White-nose syndrome

Mesh:

Substances:

Year:  2020        PMID: 33200278      PMCID: PMC7830772          DOI: 10.1007/s10482-020-01493-4

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  14 in total

1.  Neutrotolerant acidophilic Streptomyces species isolated from acidic soils in China: Streptomyces guanduensis sp. nov., Streptomyces paucisporeus sp. nov., Streptomyces rubidus sp. nov. and Streptomyces yanglinensis sp. nov.

Authors:  Chunguang Xu; Liming Wang; Qingfeng Cui; Ying Huang; Zhiheng Liu; Guangyu Zheng; Michael Goodfellow
Journal:  Int J Syst Evol Microbiol       Date:  2006-05       Impact factor: 2.747

2.  Long-Term Persistence of Pseudogymnoascus destructans, the Causative Agent of White-Nose Syndrome, in the Absence of Bats.

Authors:  Joseph R Hoyt; Kate E Langwig; Joseph Okoniewski; Winifred F Frick; Ward B Stone; A Marm Kilpatrick
Journal:  Ecohealth       Date:  2014-09-27       Impact factor: 3.184

3.  Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis.

Authors:  David P Labeda; Christopher A Dunlap; Xiaoying Rong; Ying Huang; James R Doroghazi; Kou-San Ju; William W Metcalf
Journal:  Antonie Van Leeuwenhoek       Date:  2016-12-30       Impact factor: 2.271

4.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

5.  A large-scale evaluation of algorithms to calculate average nucleotide identity.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Jeongmin Lim; Soonjae Kwon; Jongsik Chun
Journal:  Antonie Van Leeuwenhoek       Date:  2017-02-15       Impact factor: 2.271

6.  Taxonomic evaluation of the Streptomyces hygroscopicus clade using multilocus sequence analysis and DNA-DNA hybridization, validating the MLSA scheme for systematics of the whole genus.

Authors:  Xiaoying Rong; Ying Huang
Journal:  Syst Appl Microbiol       Date:  2011-12-14       Impact factor: 4.022

7.  Shifting the genomic gold standard for the prokaryotic species definition.

Authors:  Michael Richter; Ramon Rosselló-Móra
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-23       Impact factor: 11.205

8.  Fungal disease and the developing story of bat white-nose syndrome.

Authors:  David S Blehert
Journal:  PLoS Pathog       Date:  2012-07-19       Impact factor: 6.823

9.  BIGSdb: Scalable analysis of bacterial genome variation at the population level.

Authors:  Keith A Jolley; Martin C J Maiden
Journal:  BMC Bioinformatics       Date:  2010-12-10       Impact factor: 3.169

Review 10.  Threats Posed by the Fungal Kingdom to Humans, Wildlife, and Agriculture.

Authors:  Matthew C Fisher; Sarah J Gurr; Christina A Cuomo; David S Blehert; Hailing Jin; Eva H Stukenbrock; Jason E Stajich; Regine Kahmann; Charles Boone; David W Denning; Neil A R Gow; Bruce S Klein; James W Kronstad; Donald C Sheppard; John W Taylor; Gerard D Wright; Joseph Heitman; Arturo Casadevall; Leah E Cowen
Journal:  mBio       Date:  2020-05-05       Impact factor: 7.786

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  1 in total

1.  Great diversity of KSα sequences from bat-associated microbiota suggests novel sources of uncharacterized natural products.

Authors:  Paris S Salazar-Hamm; Jennifer J Marshall Hathaway; Ara S Winter; Nicole A Caimi; Debbie C Buecher; Ernest W Valdez; Diana E Northup
Journal:  FEMS Microbes       Date:  2022-04-18
  1 in total

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