| Literature DB >> 33195967 |
Christian Alvin H Buhat1, Jessa Camille C Duero1, Edd Francis O Felix1, Jomar F Rabajante1,2, Jonathan B Mamplata1.
Abstract
Testing is crucial for early detection, isolation, and treatment of coronavirus disease (COVID-19)-infected individuals. However, in resource-constrained countries such as the Philippines, test kits have limited availability. As of 11 April 2020, there are 11 testing centers in the country that have been accredited by the Department of Health (DOH) to conduct testing. In this paper, we use nonlinear programming (NLP) to determine the optimal percentage allocation of COVID-19 test kits among accredited testing centers in the Philippines that gives an equitable chance to all infected individuals to be tested. Heterogeneity in testing accessibility, population density of municipalities, and the capacity of testing facilities are included in the model. Our results show that the range of optimal allocation per testing center are as follows: Research Institute for Tropical Medicine (4.17-6.34%), San Lazaro Hospital (14.65-24.03%), University of the Philippines-National Institutes of Health (16.25-44.80%), Lung Center of the Philippines (15.8-26.40%), Baguio General Hospital Medical Center (0.58-0.76%), The Medical City, Pasig City (5.96-25.51%), St. Luke's Medical Center, Quezon City (1.09-6.70%), Bicol Public Health Laboratory (0.06-0.08%), Western Visayas Medical Center (0.71-4.52%), Vicente Sotto Memorial Medical Center (1.02-2.61%), and Southern Philippines Medical Center (≈ 0.01%). Our results can serve as a guide to the authorities in distributing the COVID-19 test kits. These can also be used for proposing additional testing centers and utilizing the available test kits properly and equitably, which helps in "flattening" the epidemic curve. © Springer Nature Switzerland AG 2020.Entities:
Keywords: COVID-19; Coronavirus; Infectious diseases; Nonlinear programming; Optimal allocation; Test kits
Year: 2020 PMID: 33195967 PMCID: PMC7651813 DOI: 10.1007/s41666-020-00081-5
Source DB: PubMed Journal: J Healthc Inform Res ISSN: 2509-498X
Fig. 1Heat map of infections and locations of testing centers accredited by the World Health Organization as of 11 April 2020. The following are the accredited testing centers and are shown on the map: (1) Research Institute for Tropical Medicine (RITM); (2) San Lazaro Hospital; (3) University of the Philippines - National Institutes of Health (UP-NIH); (4) Lung Center of the Philippines; (5) Baguio General Hospital and Medical Center (BGHMC); (6) The Medical City, Pasig City (TMC); (7) St. Luke’s Medical Center, Quezon City; (8) Bicol Public Health Laboratory (BPHL); (9) Western Visayas Medical Center (WVMC); (10) Vicente Sotto Memorial Medical Center (VSMMC); (11) Southern Philippines Medical Center (SPMC
Proportion of test kits to be distributed in the different testing centers for k = 1.5614, k = 0.4136, and k = 0.0849 where “*” are assumed values for daily limit
| Testing center | Range | Daily limit | |||
|---|---|---|---|---|---|
| RITM | 6.34% | 4.17% | 6.26% | [4.17 | 900 |
| San Lazaro | 23.4% | 24.03% | 14.65% | [14.65 | 100 |
| UP-NIH | 44.8% | 16.25% | 27.79% | [16.25 | 80 |
| Lung center | 15.8% | 20.29% | 26.4% | [15.80 | 100 |
| BGHMC | 0.76% | 0.64% | 0.58% | [0.58 | 150 |
| TMC | 5.96% | 25.51% | 15.65% | [5.96 | 100* |
| St. Luke’s | 1.09% | 1.9% | 6.7% | [1.09 | 100* |
| BPHL | 0.06% | 0.07% | 0.08% | [0.06 | 100* |
| WVMC | 0.77% | 4.52% | 0.71% | [0.71 | 80 |
| VSMMC | 1.02% | 2.61% | 1.17% | [1.02 | 240 |
| SPMC | 0.01% | 0.01% | 0.01% | [0.01 | 100 |
Fig. 2Proportion of test kits for various number of testing centers against different values of k. These testing centers are located in (1) Research Institute for Tropical Medicine (RITM); (2) San Lazaro Hospital; (3) University of the Philippines - National Institutes of Health; (4) Lung Center of the Philippines; (5) Baguio General Hospital and Medical Center; (6) The Medical City, Pasig City; (7) St. Luke’s Medical Center, Quezon City; (8) Bicol Public Health Laboratory; (9) Western Visayas Medical Center; (10) Vicente Sotto Memorial Medical Center; (11) Southern Philippines Medical Center; (12) Caloocan City; (13) Cavite; (14) Mandaluyong City; (15) Makati City; (16) Laguna; (17) Taguig City; (18) Pasay City; (19) Rizal; (20) Bulacan; (21) Las Piñas City; (22) Parañaque City; (23) Marikina City; (24) Malabon City; (25) Valenzuela City; (26) Navotas City; (27) Pangasinan; (28) Batangas; (29) Negros Occidental; (30) San Juan City
Fig. 3Locations of the 11 testing centers accredited by the World Health Organization as of 12 April 2020 and the 19 additional testing centers. The following are the testing centers and are shown in the map: (1) Research Institute for Tropical Medicine (RITM); (2) San Lazaro Hospital; (3) University of the Philippines - National Institutes of Health (UP-NIH); (4) Lung Center of the Philippines; (5) Baguio General Hospital and Medical Center (BGHMC); (6) The Medical City, Pasig City (TMC); (7) St. Luke’s Medical Center, Quezon City; (8) Bicol Public Health Laboratory (BPHL); (9) Western Visayas Medical Center (WVMC); (10) Vicente Sotto Memorial Medical Center (VSMMC); (11) Southern Philippines Medical Center (SPMC); (12) Caloocan City; (13) Cavite; (14) Mandaluyong City; (15) Makati City; (16) Laguna; (17) Taguig City; (18) Pasay City; (19) Rizal; (20) Bulacan; (21) Las Piñas City; (22) Parañaque City; (23) Marikina City; (24) Malabon City; (25) Valenzuela City; (26) Navotas City; (27) Pangasinan; (28) Batangas; (29) Negros Occidental; (30) San Juan City
Actual positivity rate of individuals tested in the Philippines as of April 11 [19], computed allocation of test kits from our NLP model with k = 1.5614, and date of accreditation of the testing center
| Actual (as of April 11) | Computed ( | Date accredited | |
|---|---|---|---|
| RITM | 89.48% | 6.34% | 3/17/2020 |
| San Lazaro | 1.16% | 23.40% | 3/27/2020 |
| UP-NIH | 2.42% | 44.80% | 3/27/2020 |
| Lung Center | 1.38% | 15.18% | 3/27/2020 |
| BGHMC | 0.71% | 0.76% | 3/27/2020 |
| TMC | 0.00% | 5.96% | 4/6/2020 |
| St. Luke’s | 1.38% | 1.09%6 | 4/5/2020 |
| BPHL | 0.08% | 0.06% | 4/5/2020 |
| WVMC | 0.73% | 0.77% | 3/31/2020 |
| VSMMC | 0.57% | 1.02% | 3/27/2020 |
| SPMC | 2.09% | 0.01% | 3/27/2020 |
Proportion of test kits to be distributed in 21 testing centers
| Testing center | Range | Daily limit | |||
|---|---|---|---|---|---|
| RITM | 1.3% | 1.4% | 1.39% | [1.30 | 900 |
| San Lazaro | 5.39% | 10.67% | 6.55% | [5.39 | 100 |
| UP-NIH | 4.32% | 16.44% | 14.38% | [4.32 | 80 |
| Lung Center | 8.51% | 9.85% | 10.02% | [8.51 | 100 |
| BGHMC | 0.46% | 0.44% | 0.42% | [0.42 | 150 |
| TMC | 2.39% | 2.75% | 5.88% | [2.39 | 100* |
| St. Luke’s, QC | 0.53% | 0.56% | 3.23% | [0.53 | 100* |
| BPHL | 0.05% | 0.05% | 0.06% | [0.05 | 100* |
| WVMC | 0.57% | 0.55% | 0.61% | [0.55 | 80 |
| VSMMC | 0.01% | 0.01% | 0.01% | [0.01 | 240 |
| SPMC | 7.31% | 7.79% | 9.2% | [7.31 | 100 |
| Caloocan City | 6.91% | 2.05% | 4.31% | [2.05 | 100* |
| Cavite | 3.99% | 6.83% | 5.37% | [3.99 | 100* |
| Mandaluyong City | 6.33% | 3.59% | 4.64% | [3.59 | 100* |
| Makati City | 11.06% | 10.26% | 5.79% | [5.79 | 100* |
| Laguna | 8.66% | 2.67% | 8.19% | [2.67 | 100* |
| Taguig City | 8.72% | 9.04% | 8.23% | [8.23 | 100* |
| Pasay City | 6.67% | 6.94% | 0.21% | [0.21 | 100* |
| Rizal | 9.78% | 4.23% | 4.47% | [4.23 | 100* |
| Bulacan | 4.81% | 1.64% | 3.44% | [1.64 | 100* |
| Las Piñas City | 2.23% | 2.23% | 3.61% | [2.23 | 100* |
* - Assumed maximum tested individuals per day
Proportion of test kits to be distributed in 30 testing centers
| Testing center | Range | Daily limit | |||
|---|---|---|---|---|---|
| Research institute for tropical medicine (RITM) | 1.32% | 1.21% | 1.51% | [1.21 | 900 |
| San Lazaro Hospital | 2.81% | 6.99% | 3.51% | [2.81 | 100 |
| UP-NIH | 5.41% | 6.76% | 7.19% | [5.41 | 80 |
| Lung Center of the Philippines | 6.3% | 3.47% | 4.75% | [3.47 | 100 |
| BGHMC | 0.43% | 0.43% | 0.43% | [0.43 | 150 |
| TMC | 2.79% | 3.64% | 4.02% | [2.79 | 100* |
| St. Luke’s Medical Center, Quezon City | 0.37% | 0.41% | 1.1% | [0.37 | 100* |
| BPHL | 0.05% | 0.05% | 0.06% | [0.05 | 100* |
| WVMC | 0.57% | 0.61% | 0.62% | [0.57 | 80 |
| VSMMC | 0.01% | 0.01% | 0.01% | [0.01 | 240 |
| SPMC | 2.41% | 2.4% | 5.27% | [2.40 | 100 |
| Caloocan City | 4.9% | 6.12% | 3.02% | [3.02 | 100* |
| Cavite | 3.32% | 3.2% | 3.38% | [3.20 | 100* |
| Mandaluyong City | 4.13% | 2.72% | 5.74% | [2.72 | 100* |
| Makati City | 6.56% | 3.09% | 1.74% | [1.74 | 100* |
| Laguna | 4.65% | 2.86% | 5.32% | [2.86 | 100* |
| Taguig City | 3.27% | 1.6% | 3.59% | [1.60 | 100* |
| Pasay City | 2.93% | 5.01% | 0.3% | [0.30 | 100* |
| Rizal | 4.01% | 3.91% | 3.67% | [3.67 | 100* |
| Bulacan | 5.53% | 2.98% | 3.45% | [2.98 | 100* |
| Las Piñas City | 6.27% | 1.76% | 6.98% | [1.76 | 100* |
| Parañaque City | 2.02% | 6.07% | 4.74% | [2.02 | 100* |
| Marikina City | 4.50% | 4.96% | 4.51% | [4.50 | 100* |
| Malabon City | 2.11% | 3.33% | 1.22% | [1.22 | 100* |
| Valenzuela City | 3.51% | 3.51% | 3.56% | [3.51 | 100* |
| Navotas City | 7.06% | 8.68% | 4.67% | [4.67 | 100* |
| Pangasinan | 5.72% | 5.31% | 3.42% | [3.42 | 100* |
| Batangas | 3.27% | 3.17% | 4.94% | [3.17 | 100* |
| Negros Occidental | 3.64% | 5.41% | 4.51% | [3.64 | 100* |
| San Juan City | 0.13% | 0.32% | 2.79% | [0.13 | 100* |
* - Assumed maximum tested individuals per day