| Literature DB >> 33195078 |
Vincenzo Barone1, Giorgia Ceselin1, Marco Fusè1, Nicola Tasinato1.
Abstract
Accuracy and interpretability are often seen as the devil and holy grail in computational spectroscopy and their reconciliation remains a primary research goal. In the last few decades, density functional theory has revolutionized the situation, paving the way to reliable yet effective models for medium size molecules, which could also be profitably used by non-specialists. In this contribution we will compare the results of some widely used hybrid and double hybrid functionals with the aim of defining the most suitable recipe for all the spectroscopic parameters of interest in rotational and vibrational spectroscopy, going beyond the rigid rotor/harmonic oscillator model. We will show that last-generation hybrid and double hybrid functionals in conjunction with partially augmented double- and triple-zeta basis sets can offer, in the framework of second order vibrational perturbation theory, a general, robust, and user-friendly tool with unprecedented accuracy for medium-size semi-rigid molecules.Entities:
Keywords: astrochemical molecules; atmospheric molecules; benchmark; density functional theory; quantum chemistry; rotational spectroscopy; vibrational spectroscopy
Year: 2020 PMID: 33195078 PMCID: PMC7645164 DOI: 10.3389/fchem.2020.584203
Source DB: PubMed Journal: Front Chem ISSN: 2296-2646 Impact factor: 5.221
Figure 1Molecules in the benchmark set.
Figure 2Mean deviation (MD) and mean absolute deviation (MAD) from semi-experimental equilibrium structural parameters for (A) bond lengths and (B) bond angles.
Figure 3Mean percentage deviation (MD%) and mean absolute percentage deviation (MAD%) from experimental (A) ground state rotational constants and (B) quartic centrifugal distortion constants.
Figure 4Mean deviation (MD) and mean absolute deviation (MAD) from reference CCSD(T)-based theoretical values for (A) harmonic vibrational frequencies, (B) harmonic infrared intensities.
Figure 5Mean deviation (MD) and mean absolute deviation (MAD) from experimental fundamental frequencies. MADs for the ωB97 family are out of range.
Figure 6Mean deviation (MD) and mean absolute deviation (MAD) from experimental integrated absorption cross sections for selected model chemistries.
Figure 7Structures of (A) SO2⋯ (CH3)2S complex, (B) dimethyl sulfide, and (C) cyc-(CH)C3H2 cation.
Equilibrium structure of the SO2⋯ S(CH3) 1:1 complex.
| 2.947 | 2.8672 | 2.8676 | 2.9257 | 2.9288 | |
| 1.446 | 1.4966 | 1.4579 | 1.4532 | 1.4499 | |
| 1.790 | 1.8244 | 1.7954 | 1.8040 | 1.8029 | |
| 1.089 | 1.0941 | 1.0949 | 1.0883 | 1.0911 | |
| 1.086 | 1.0915 | 1.0936 | 1.0864 | 1.0895 | |
| 1.087 | 1.0922 | 1.0926 | 1.0870 | 1.0901 | |
| ∠(O1S1S2) | 95.0 | 96.10 | 95.62 | 95.20 | 94.92 |
| ∠(C1S2S1) | 91.7 | 91.20 | 91.88 | 91.27 | 91.52 |
| ∠(H1C1S2) | 110.6 | 110.08 | 110.72 | 110.67 | 110.60 |
| ∠(H2C1S2) | 107.3 | 106.91 | 107.01 | 107.14 | 107.25 |
| ∠(H3C1S2) | 109.8 | 109.48 | 109.98 | 109.97 | 109.93 |
| δ(O2S1S2O1) | −118.2 | −115.92 | −117.51 | −117.84 | −117.86 |
| δ(C1S2S1O1) | 9.8 | 7.70 | 8.46 | 8.84 | 9.10 |
| δ(H1C1C2S1) | 27.2 | 21.71 | 26.60 | 26.06 | 27.91 |
| δ(H2C1S2S1) | −91.6 | −96.87 | −91.94 | −92.56 | −90.77 |
| δ(H3C1S2S1) | 149.5 | 144.27 | 149.41 | 148.63 | 150.37 |
Bond lengths in Å, angles in deg. For atom labeling see Figure 7.
Semi-experimental equilibrium structure from Obenchain et al. (2018).
Employed in conjunction with the SNSD basis set.
Employed in conjunction with the jul-cc-pV(D+d)Z basis set.
Employed in conjunction with the may′-cc-pVTZ basis set. From Obenchain et al. (2018).
Employed in conjunction with the jun-cc-pV(T+d)Z basis set.
Equilibrium structure of hydrogen disulfide.
| 2.0596 | 2.0609 | 2.0513 (3;7) | |
| 1.3493 | 1.3422 | 1.3401 (14;32) | |
| ∠(HSS) | 98.35 | 98.24 | 98.07 (2;3) |
| δ(HSSH) | 90.73 | 90.63 | 90.72 (2;5) |
Bond lengths in Å, angles in deg.
Semi-experimental structure from Ye et al. (2020). Values in parentheses are the standard deviation (first value) and the confidence interval at a 95% confidence level (second value).
Harmonic frequencies (in cm−1) and intensities (in km mol−1) for cyc-CHC3 computed at different levels of theory.
| ω1 | a1 | 3,366 | 175.49 | 3,396 | 182.12 | 3,387 | 159.25 | 3,379 | 148.18 | 3370.2 | 121 |
| ω2 | a1 | 3,310 | 68.88 | 3,350 | 67.03 | 3,335 | 70.79 | 3,333 | 66.88 | 3325.9 | 76 |
| ω3 | a1 | 1,973 | 52.29 | 2,000 | 56.93 | 1,993 | 75.71 | 2,004 | 98.48 | 1977.3 | 186 |
| ω4 | a1 | 1,673 | 51.24 | 1,692 | 48.78 | 1,695 | 54.20 | 1,697 | 65.58 | 1681.3 | 67 |
| ω5 | a1 | 917 | 2.85 | 913 | 3.63 | 920 | 4.40 | 912 | 6.20 | 908.2 | 7 |
| ω6 | a1 | 798 | 22.40 | 825 | 19.42 | 772 | 33.55 | 766 | 42.04 | 768.6 | 63 |
| ω7 | a2 | 758 | 0.00 | 747 | 0.00 | 749 | 0.00 | 735 | 0.00 | 713.1 | 0 |
| ω8 | b1 | 731 | 65.29 | 723 | 63.95 | 735 | 65.00 | 731 | 64.92 | 711.5 | 77 |
| ω9 | b1 | 450 | 103.33 | 436 | 94.32 | 503 | 92.13 | 517 | 89.33 | 509.3 | 12 |
| ω10 | b1 | 361 | 3.08 | 323 | 13.42 | 382 | 3.55 | 376 | 4.96 | 355.9 | 0 |
| ω11 | b2 | 3,245 | 196.22 | 3,281 | 202.93 | 3,268 | 210.18 | 3,265 | 208.15 | 3260.5 | 234 |
| ω12 | b2 | 995 | 6.38 | 989 | 5.47 | 998 | 7.00 | 994 | 6.38 | 985.5 | 8 |
| ω13 | b2 | 944 | 0.69 | 933 | 0.45 | 937 | 0.04 | 935 | 0.11 | 920.6 | 3 |
| ω14 | b2 | 627 | 28.13 | 680 | 32.53 | 571 | 25.14 | 578 | 26.50 | 580.4 | 22 |
| ω15 | b2 | 200 | 24.47 | 190 | 23.01 | 170 | 26.96 | 160 | 27.56 | 155.7 | 46 |
Taken from Westbook et al. (.
Anharmonic frequencies (in cm−1) and intensities (in km mol−1) for cyc-CHC3 obtained at different levels of theory.
| ν1 | a1 | 3,242 | 89.15 | 3,256 | 213.92 | 3,261 | 188.89 | 3,252 | 159.06 | 3,262 | 188.96 | 3,243 | 217.46 | 3,254 | 202.75 | 3237.1 |
| ν2 | a1 | 3,173 | 47.80 | 3,204 | 25.91 | 3,195 | 32.81 | 3,195 | 43.11 | 3,194 | 27.39 | 3,181 | 17.69 | 3,193 | 27.27 | 3182.2 |
| ν3 | a1 | 1,948 | 32.75 | 1,977 | 43.62 | 1,975 | 58.99 | 1,984 | 77.84 | 1,973 | 66.32 | 1,984 | 43.62 | 1,987 | 33.98 | 1947.8 |
| ν4 | a1 | 1,647 | 45.54 | 1,664 | 41.55 | 1,666 | 33.30 | 1,665 | 57.64 | 1,672 | 41.27 | 1,671 | 45.65 | 1,673 | 47.57 | 1641.9 |
| ν5 | 903 | 3.50 | 897 | 5.08 | 902 | 0.81 | 902 | 3.55 | 901 | 1.92 | 873 | 0.31 | 895 | 1.50 | 884.4 | |
| ν6 | a1 | 761 | 22.08 | 804 | 25.51 | 744 | 6.46 | 766 | 14.54 | 751 | 22.70 | 719 | 5.33 | 746 | 14.77 | 760.2 |
| ν7 | a2 | 743 | 0.00 | 738 | 0.00 | 736 | 0.00 | 723 | 0.00 | 735 | 0.00 | 723 | 0.00 | 720 | 0 | 713 |
| ν8 | b1 | 717 | 67.04 | 713 | 66.81 | 722 | 68.65 | 719 | 68.28 | 723 | 67.48 | 720 | 67.62 | 719 | 67.62 | 729 |
| ν9 | b1 | 410 | 65.38 | 481 | 96.72 | 496 | 90.31 | 511 | 87.86 | 473 | 100.36 | 515 | 92.55 | 487 | 95.23 | 480.8 |
| ν10 | b1 | 315 | 35.31 | 303 | 8.67 | 380 | 4.26 | 372 | 5.64 | 343 | 0.08 | 388 | 12.01 | 336 | 13.79 | 154.3 |
| ν11 | b2 | 3,117 | 192.57 | 3,146 | 199.69 | 3,141 | 207.44 | 3,140 | 205.27 | 3,141 | 206.76 | 3,129 | 200.04 | 3,138 | 193.33 | 3130.1 |
| ν12 | b2 | 964 | 5.79 | 962 | 7.78 | 974 | 8.12 | 968 | 7.34 | 970 | 8.83 | 966 | 8.11 | 965 | 9.21 | 970.1 |
| ν13 | b2 | 909 | 0.02 | 903 | 0.03 | 901 | 0.91 | 921 | 0.48 | 896 | 1.23 | 907 | 0.03 | 908 | 0.02 | 894 |
| ν14 | b2 | 594 | 25.65 | 653 | 30.44 | 531 | 21.92 | 539 | 22.88 | 525 | 22.11 | 530 | 29.72 | 532 | 25.18 | 547.4 |
| ν15 | b2 | 199 | 23.79 | 189 | 22.13 | 172 | 26.35 | 163 | 26.95 | 172 | 26.33 | 160 | 22.46 | 162 | 23.91 | 175.9 |
Taken from Westbook et al. (2020).
Figure 8Anharmonic infrared spectrum of cyc-CHC3 simulated by using different levels of theory (computed spectral transitions have been convoluted with a Lorentzian function with an half-width at half-maximum of 2 cm−1). B2: full B2PLYP/jun-cc-pVTZ anharmonic force field; B2/B3: B2PLYP/jun-cc-pVTZ harmonic force field and B3LYP/SNSD anharmonic effects; rev-DSD: full rev-DSDPBEP86/jun-cc-pVTZ anharmonic force field; rev-DSD/PW6: rev-DSDPBEP86/jun-cc-pVTZ harmonic force field and PW6B95/jul-cc-pVDZ anharmonic effects. Some traces have been displaced fpr clarity.