| Literature DB >> 33194406 |
Jian-Mei Wang1, Jing Bai1, Fang-Yuan Zheng1, Yao Ling1, Xiang Li1, Jing Wang1, Yong-Chao Zhi1, Xin-Jiang Li1.
Abstract
BACKGROUND: Grasshoppers are typical phytophagous pests, and they have large appetites with high utilization of plants fibers, the digestion of which may depend on the microorganisms in their intestines. Grasshoppers have the potential to be utilized in bioreactors, which could improve straw utilization efficiency in the future. In this study, we describe the gut microbiome in three species of grasshoppers, Oedaleus decorus asiaticus, Aiolopus tamulus and Shirakiacris shirakii, by constructing a 16S rDNA gene library and analyzed the digestibility of cellulose and hemicellulose in the grasshoppers by using moss black phenol colorimetry and anthrone colorimetry.Entities:
Keywords: Cellulose digestibility; Diversity; Grasshopper; Gut microbiome; Orthoptera
Year: 2020 PMID: 33194406 PMCID: PMC7649011 DOI: 10.7717/peerj.10194
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Information on the studied samples.
| Species | Sample code | No. of specimens | Locality | Collection date |
|---|---|---|---|---|
| At1 | 10 | Baoding, China | 15 July 2018 | |
| At2 | 10 | Baoding, China | 15 July 2018 | |
| At3 | 11 | Baoding, China | 1 October 2018 | |
| Od1 | 10 | Baoding, China | 1 October 2018 | |
| Od2 | 10 | Baoding, China | 1 October 2018 | |
| Od3 | 12 | Baoding, China | 15 July 2018 | |
| Ss1 | 10 | Baoding, China | 1 October 2018 | |
| Ss2 | 10 | Baoding, China | 1 October 2018 | |
| Ss3 | 10 | Baoding, China | 1 October 2018 |
Sequence and proportion results of each sample and bacterial identification results.
| Sample | Clean tags | Effective tags | Proportion (%) | Identification result |
|---|---|---|---|---|
| At1 | 53704 | 53325 | 99.29 | 4 Phyla, 7 classes, 11 orders, 18 families, 26 genera |
| At2 | 51643 | 51479 | 99.68 | 5 Phyla, 9 classes, 13 orders, 24 families, 31 genera |
| At3 | 61063 | 61018 | 99.93 | 5 Phyla, 10 classes, 17orders, 28 families, 28 genera |
| Od1 | 61047 | 61024 | 99.96 | 6 Phyla, 9 classes, 12 orders, 18 families, 21 genera |
| Od2 | 72346 | 72296 | 99.93 | 6 Phyla, 9 classes, 16 orders, 23 families, 27 genera |
| Od3 | 53117 | 52034 | 97.96 | 5 Phyla, 7 classes, 11 orders, 17 families, 22 genera |
| Ss1 | 52796 | 52631 | 99.68 | 5 Phyla, 9 classes, 16 orders, 28 families, 32 genera |
| Ss2 | 53296 | 53144 | 99.71 | 5 Phyla, 8 classes, 15 orders, 25 families, 31 genera |
| Ss3 | 53097 | 52485 | 98.85 | 5 Phyla, 8 classes, 13 orders, 24 families, 30 genera |
| Total | 512109 | 509436 | 99.48 | 7 Phyla, 12 classes, 20 orders, 42 families, 54 genera |
Figure 1The results of OTU-Venn analysis.
(A) OTU Venn diagram among different species. (B) Composition of common OTUs at the family level.
Figure 2The results of α-diversity analysis.
(A) Rarefaction curves of 9 samples of grasshopper intestinal contents. (B) Species discovery curve. (A single blue box in this figure represents the total number of species detected in randomly selected samples. The cumulative curve is composed of the totality of blue boxes, which represents the rate of new species appearing under continuous sampling; a single purple box in this figure represents the number of common species detected in a given number of samples. The set of purple boxes form the common quantity curve, which represents the rate of common species detected under continuous sampling). (C) Chao1 index of the three species grasshoppers. (D) ACE index of the three species grasshoppers. (E) Simpson index of three species grasshoppers. (F) Shannon index of the three species grasshoppers.
Statistical results of the diversity index of the intestinal content samples of grasshoppers.
| Simple ID | OTU | ACE | Chao1 | Simpson | Shannon | Coverage |
|---|---|---|---|---|---|---|
| At1 | 37 | 41.5776 | 40.0000 | 0.3996 | 1.1721 | 0.9999 |
| At2 | 47 | 48.7316 | 48.2000 | 0.5780 | 0.9800 | 0.9999 |
| At3 | 41 | 48.9659 | 52.2500 | 0.9249 | 0.2079 | 0.9998 |
| Od1 | 31 | 41.2173 | 38.2000 | 0.9211 | 0.2320 | 0.9998 |
| Od2 | 40 | 49.3557 | 47.2000 | 0.7624 | 0.5464 | 0.9999 |
| Od3 | 33 | 39.0695 | 37.6667 | 0.4783 | 1.0977 | 0.9998 |
| Ss1 | 50 | 51.9067 | 50.8571 | 0.8528 | 0.4748 | 0.9999 |
| Ss2 | 46 | 52.1871 | 51.6000 | 0.8964 | 0.3283 | 0.9998 |
| Ss3 | 44 | 62.0907 | 54.1111 | 0.7679 | 0.5609 | 0.9997 |
Figure 3The results of β-diversity analysis.
(A) UPGMA cluster analysis of the three species grasshoppers. (B) NMDS analysis based on the binary-jaccard distance. (C) Heatmap of each sample at the OTU classification level (Blue indicate similarity and red indicate distance).
Figure 4Diversity of the bacterial microbiota in the three species grasshoppers guts at the phylum(A)/genus (B) level.
Digestibility of cellulose and hemicellulose in wheat seedlings in three species grasshoppers.
| Sample | Digestibility rate of cellulose | Digestibility rate of hemicellulose |
|---|---|---|
| 43.95 ± 2.02a | 17.21 ± 2.98b | |
| 38.01 ± 3.96a | 24.99 ± 4.80b | |
| 44.12 ± 3.60a | 47.65 ± 3.37a |
Note:
The data in the table are expressed as the mean standard error, and the data in the same column with different lowercase letters show significant difference (P < 0.05).
Figure 5LEfSe analysis identifies biomarkers that cause differences between groups.
(A) Taxonomic cladogram obtained from LEfSe analysis of 16S sequences and the brightness of each dot is proportional to its effect size. (B) Only taxa meeting an LDA significant threshold >2 are shown.
Figure 6Heatmap of the correlation between digestibility and bacterial abundance.
*There is a significant correlation of 5% between digestibility and bacteria. **There is a significant correlation of 1% between digestibility and bacteria. ***There is a significant correlation of 0.1% between digestibility and bacteria.