| Literature DB >> 33192552 |
Mazarine Desplanque1,2, Marie-Amandine Bonte1, Bernard Gressier1,2, David Devos1,3, Marie-Christine Chartier-Harlin1, Karim Belarbi1,2.
Abstract
Glucocerebrosides are sphingolipid components of cell membranes that intervene in numerous cell biological processes and signaling pathways and that deregulation is implicated in human diseases such as Gaucher disease and Parkinson's disease. In the present study, we conducted a systematic review using document co-citation analysis, clustering and visualization tools to explore the trends and knowledge structure of glucocerebrosides research as indexed in the Science Citation Index Expanded database (1956-present). A co-citation network of 5,324 publications related to glucocerebrosides was constructed. The analysis of emerging categories and keywords suggested a growth of research related to neurosciences over the last decade. We identified ten major areas of research (e.g., clusters) that developed over time, from the oldest (i.e., on glucocerebrosidase protein or molecular analysis of the GBA gene) to the most recent ones (i.e., on drug resistance in cancer, pharmacological chaperones, or Parkinson's disease). We provided for each cluster the most cited publications and a description of their intellectual content. We moreover identified emerging trends in glucocerebrosides research by detecting the surges in the rate of publication citations in the most recent years. In conclusion, this study helps to apprehend the most significant lines of research on glucocerebrosides. This should strengthen the connections between scientific communities studying glycosphingolipids to facilitate advances, especially for the most recent researches on cancer drug resistance and Parkinson's disease.Entities:
Keywords: Parkinson Disease; cancer drug resistance; gangliosides; gaucher disease; glucocerebrosides; glucosylceramides; lipids; sphingolipids
Year: 2020 PMID: 33192552 PMCID: PMC7658098 DOI: 10.3389/fphys.2020.558090
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Figure 1Structure and metabolism of glucocerebrosides. (A) Glucocerebrosides are composed of a sphingosine, a fatty acid chain (these two forming a ceramide) and a single glucose residue. The fatty acid attached to the sphingosine may vary in chain length and in degree of unsaturation; (B) Glucocerebrosides are synthesized in the Golgi apparatus by the rate-limiting enzyme glucocerebroside synthase (UGCG; located on locus 9q31; also named glucosylceramide synthase) that uses UDP-glucose as the glycosyl donor. The catabolism of glucocerebrosides is primarily initiated in the lysosomes by the action of the lysosomal glucocerebrosidase (encoded by the GBA gene located on locus 1q21). Glucocerebrosides can serve as precursors for the production of more complex glycosphingolipids such as lactosylceramide and gangliosides by sequential addition of sugars and other chemical groups.
Figure 2Major categories involved in glucocerebrosides research. In this representation, nodes represent categories and edges represent instances of co-occurrence. A larger radius corresponds to a higher occurrence (log transformed). The thickness of the edges is proportional to the co-occurrence strength. Categories with burst at a certain time are represented with a red ring. Clinical neurology and Neuroscience, with some of its citation rings in red, belong to categories in which the number of articles has increased rapidly.
Web of Science categories with strong occurrence burst in descending order of burst strength.
| Biochemistry & Molecular biology | 1534 | 63.10 (1965-1992) | |
| Neurosciences | 362 | 37.46 (2015-2019) | |
| Biophysics | 317 | 36.79 (1973-1993) | |
| Clinical neurology | 436 | 25.45 (2012-2019) | |
| Hematology | 380 | 21.93 (1993-2001) |
Red line segments indicate the time slices in which categories bursts, that is, rapid increases of citation counts, are detected.
Top 5 keywords with the strongest occurrence burst.
| Parkinson's disease | 66.09 (2013-2019) | |
| Glucocerebrosidase mutation | 40.84 (2012-2019) | |
| Human glucocerebrosidase gene | 37.59 (1991-2002) | |
| Alpha synuclein | 35.03 (2014-2019) | |
| Macrophage targeted glucocerebrosidase | 25.46 (1994-2004) |
Red line segments indicate the time slices in which keywords bursts are detected.
Figure 3Co-citation network analysis. Co-citation map of references from publications on glucocerebrosides research published between 1956 and 2019. In this representation, nodes represent cited references and edges represent instances of co-citation. A larger radius corresponds to a higher citation in the co-citation network. The thickness of the edges is proportional to the co-citation strength. The color of the lines indicates the time period in which the co-citations first occurred. Nodes with a betweenness centrality >0.1 (e.g., nodes linked with over 10% of the nodes in the whole network) are represented with a purple circle.
Major clusters of co-cited references.
| #0 | Parkinson's disease | 122 | 2011 |
| #1 | Gaucher disease | 117 | 1999 |
| #2 | Replacement therapy | 94 | 1999 |
| #3 | Human spleen | 93 | 1976 |
| #4 | Molecular analysis | 68 | 1991 |
| #5 | Kupffer cell | 67 | 1982 |
| #6 | Human glucocerebrosidase | 53 | 1988 |
| #7 | Sphingolipid precursor | 53 | 1993 |
| #8 | Pharmacological chaperone | 52 | 2006 |
| #9 | Glucosylceramide beta-glucosidase | 41 | 1987 |
Clusters are referred in terms of the labels selected by log-likelihood ratio test method.
Figure 4Clustering analysis of the co-citation network. Clusters are labeled by terms extracted from the titles of their most representative articles. For clarity, each cluster has its nodes and label of a unique color. Small clusters may be hidden due to the graphical representation. The youngest cluster is the Cluster #0 (Parkinson's disease) in the higher right corner of the visualization.
Most frequently cited reference for each of the ten largest document co-citation clusters in the co-citation network.
| Cluster #0 (Parkinson's disease) | SIDRANSKY E, 2009 | Multicenter analysis of glucocerebrosidase mutations in Parkinson's disease. | Data collected from 16 centers demonstrate that there is a strong association between | Sidransky et al., |
| Cluster #1 (Gaucher disease) | HANNUN YA, 2008 | Principles of bioactive lipid signaling: lessons from sphingolipids. | The cellular actions of ceramide and other bioactive sphingolipids appear to be crucial for angiogenesis, immune responses, diabetes, aging, cancer biology and degenerative diseases. | Hannun and Obeid, |
| Cluster #2 (Replacement therapy) | BARTON NW, 1991 | Replacement therapy for inherited enzyme deficiency-macrophage-targeted glucocerebrosidase for Gaucher's disease. | Intravenous administration of macrophage-targeted human placental glucocerebrosidase produces objective clinical improvement in patients with type 1 Gaucher disease. | Barton et al., |
| Cluster #3 (Human spleen) | PENTCHEVPG, 1973 | Isolation and characterization of glucocerebrosidase from human placental tissue. | Human placental glucocerebrosidase was purified and characterized as a tetramer composed of 4 catalitically active units whose mass is 60kDa each. The enzyme is most active with glucocerebroside. | Pentchev et al., |
| Cluster #4 (Molecular analysis) | BEUTLER E, 1995 | Gaucher disease. In: The Metabolic and Molecular Bases of Inherited Disease, 7th edition. | This chapter provides a comprehensive coverage of the genetic, molecular, metabolic and clinical underpinnings of Gaucher disease. | Beutler and Grabowski, |
| Cluster #5 (Kupffer cells) | BRADY RO, 1983 | Glucosyl Ceramide Lipidosis: Gaucher's Disease. In: The Metabolic Basis of Inherited Disease, 5th edition. | This chapter reviews the clinical manifestations, pathophysiology, metabolic abnormality and molecular basis of Gaucher disease. | Brady and Barranger, |
| Cluster #6(Human glucocerebrosidase) | BARTON NW, 1990 | Therapeutic response to intravenous infusions of glucocerebrosidase in a patient with Gaucher disease. | This study report the clinical improvement in a child with type 1 Gaucher disease after weekly intravenous infusions of human placental glucocerebrosidase. | Barton et al., |
| Cluster #7(Sphingolipid precursors) | JECKEL D, 1992 | Glucosylceramide is synthesized at the cytosolic surface of various Golgi subfractions. | A truncated ceramide analog was used to show that glucocerebroside is synthetized at the cytosolic surface of the Golgi. Glucosylceramide synthase activity is found in fractions containing marker enzymes for the proximal Golgi, and also in fractions containing distal Golgi markers. | Jeckel et al., |
| Cluster #8(Pharmacological chaperone) | STEET RA, 2006 | The iminosugar isofagomine increases the activity of N370S mutant acid beta-glucosidase in Gaucher fibroblasts by several mechanisms. | The iminosugar isofagomine increases the activity of N370S mutant glucocerebrosidase in Gaucher fibroblasts. A major effect of isofagomine is to act as a pharmacological chaperones to assist the folding and transport of glucocerebrosidase in the endoplasmic reticulum, thereby increasing the lysosomal pool of the enzyme. | Steet et al., |
| Cluster #9(Glucosylceramide beta-glucosidase) | GLEW RH, 1988 | Mammalian glucocerebrosidase: implications for Gaucher's disease. | This review synthetizes information about the molecular biology, chemistry and enzymatic properties of glucocerebrosidase and its relevance to Gaucher disease. | Glew et al., |
Figure 5Timeline view of the co-citation network on glucocerebrosides research (1956–2019). The publication dates of articles are placed at the top of the view. Major clusters are labeled on the right.
Top 10 publications with subsequent citation bursts starting after 2016 in descending order of burst strength.
| ALCALAY RN, 2015 | Glucocerebrosidase activity in Parkinson's disease with and without GBA mutations | 0 | 33.75 | Glucocerebrosidase activity measured in dried blood spots is decreased both in Parkinson's disease patients that are | Alcalay et al., |
| SCHAPIRA AHV, 2015 | Glucocerebrosidase and Parkinson disease: Recent advances | 0 | 26.75 | This article reviews the pathogenic relationship between glucocerebrosidase deficits and alpha-synuclein pathology and suggests target pathway for the development of therapies against Parkinson's disease. | Schapira, |
| GAN-OR Z, 2015 | Differential effects of severe vs mild GBA mutations on Parkinson disease | 0 | 26.22 | Carriers of severe | Gan-Or et al., |
| CILIA R, 2016 | Survival and dementia in GBA-associated Parkinson's disease: the mutation matters | 0 | 25.86 | Carriers of severe mutations (that cause type 2 and 3 Gaucher disease) have greater risk for dementia compared to carriers of mild mutations (those that cause type 1 Gaucher disease), but similar mortality risk. | Cilia et al., |
| BEAVAN M, 2015 | Evolution of prodromal clinical markers of Parkinson disease in a GBA mutation-positive cohort | 0 | 23.53 | This study shows that, as a group, | Beavan et al., |
| LIU GQ, 2016 | Specifically neuropathic Gaucher's mutations accelerate cognitive decline in Parkinson's | 0 | 21.74 | Patients with neuropathic | Liu et al., |
| ALCALAY RN, 2014, JAMA NEUROL, V71, P752, DOI | Comparison of Parkinson Risk in Ashkenazi Jewish patients with Gaucher disease and GBA heterozygotes | 0 | 18.79 | Patients with Gaucher disease and individuals with a mutated allele of | Alcalay et al., |
| BROCKMANN K, 2015 | GBA-associated Parkinson's disease: reduced survival and more rapid progression in a prospective longitudinal study | 0 | 17.61 | The mutational | Brockmann et al., |
| MAZZULLI JR, 2016 | Activation of β-glucocerebrosidase reduces pathological α-synuclein and restores lysosomal function in Parkinson's patient midbrain neurons | 0 | 17.61 | Small molecule-mediated lysosomal glucocerebrosidase activation could lowered alpha-synuclein levels in induced pluripotent stem cell-derived human midbrain dopaminergic neurons from patients with different Parkinson's disease-linked mutations | Mazzulli et al., |
| SETO-SALVIA N, 2012, MOVEMENT DISORD, V27, P393, DOI | Glucocerebrosidase mutations confer a greater risk of dementia during parkinson's disease course | 0 | 17.22 | The individual risk of dementia in Parkinson's disease patients could be increased 6-fold in | Seto-Salvia et al., |